RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
C11orf54-202ENST00000354421 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
C11orf54-202ENST00000354421 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
C11orf54-202ENST00000354421 ADGRD1Q6QNK2 874 aa10.42□□□□□ -0.74
C11orf54-202ENST00000354421 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
C11orf54-202ENST00000354421 FYCO1Q9BQS8 1478 aa10.42□□□□□ -0.74
C11orf54-202ENST00000354421 C3P01024 1663 aa10.41□□□□□ -0.74
C11orf54-202ENST00000354421 ZMYM4Q5VZL5 1548 aa10.41□□□□□ -0.74
C11orf54-202ENST00000354421 RICTORQ6R327 1708 aa10.41□□□□□ -0.74
C11orf54-202ENST00000354421 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.74
C11orf54-202ENST00000354421 PTCD2Q8WV60 388 aaKnown RBP10.4□□□□□ -0.74
C11orf54-202ENST00000354421 CASKIN1Q8WXD9 1431 aa10.4□□□□□ -0.75
C11orf54-202ENST00000354421 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
C11orf54-202ENST00000354421 FAM135BQ49AJ0 1406 aa10.39□□□□□ -0.75
C11orf54-202ENST00000354421 ZNF784Q8NCA9 323 aaPredicted RBP10.38□□□□□ -0.75
C11orf54-202ENST00000354421 RNF17Q9BXT8 1623 aaKnown RBP10.38□□□□□ -0.75
C11orf54-202ENST00000354421 ATP10AO60312 1499 aa10.38□□□□□ -0.75
C11orf54-202ENST00000354421 RGL2O15211 777 aa10.37□□□□□ -0.75
C11orf54-202ENST00000354421 CCDC125Q86Z20 511 aa10.37□□□□□ -0.75
C11orf54-202ENST00000354421 CDK11AQ9UQ88 783 aaPredicted RBP10.37□□□□□ -0.75
C11orf54-202ENST00000354421 HFM1A2PYH4 1435 aa10.37□□□□□ -0.75
C11orf54-202ENST00000354421 ABCA9Q8IUA7 1624 aa10.37□□□□□ -0.75
C11orf54-202ENST00000354421 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 TBC1D12O60347 775 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
C11orf54-202ENST00000354421 NHSL1Q5SYE7 1610 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 PTPN23Q9H3S7 1636 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 RGS12O14924 1447 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 C9orf84Q5VXU9 1444 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 CEP350Q5VT06 3117 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
C11orf54-202ENST00000354421 HIRIP3Q9BW71 556 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-202ENST00000354421 NPATQ14207 1427 aa10.35□□□□□ -0.75
C11orf54-202ENST00000354421 FOXK1P85037 733 aa10.35□□□□□ -0.75
C11orf54-202ENST00000354421 JCADQ9P266 1359 aa10.34□□□□□ -0.75
C11orf54-202ENST00000354421 PPP1R37O75864 691 aa10.34□□□□□ -0.75
C11orf54-202ENST00000354421 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
C11orf54-202ENST00000354421 VWDEQ8N2E2 1590 aa10.34□□□□□ -0.75
C11orf54-202ENST00000354421 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
C11orf54-202ENST00000354421 HRO43593 1189 aa10.33□□□□□ -0.76
C11orf54-202ENST00000354421 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
C11orf54-202ENST00000354421 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
C11orf54-202ENST00000354421 NCOA2Q15596 1464 aa10.32□□□□□ -0.76
C11orf54-202ENST00000354421 PRELPP51888 382 aa10.32□□□□□ -0.76
C11orf54-202ENST00000354421 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
C11orf54-202ENST00000354421 NAIPQ13075 1403 aa10.32□□□□□ -0.76
C11orf54-202ENST00000354421 HNRNPUQ00839 825 aaKnown RBP eCLIP10.31□□□□□ -0.76
C11orf54-202ENST00000354421 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-202ENST00000354421 FMN1Q68DA7 1419 aa10.3□□□□□ -0.76
C11orf54-202ENST00000354421 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
C11orf54-202ENST00000354421 Q6ZNB5 142 aa10.3□□□□□ -0.76
C11orf54-202ENST00000354421 ERICH6Q7L0X2 663 aa10.3□□□□□ -0.76
C11orf54-202ENST00000354421 CTTNBP2Q8WZ74 1663 aa10.3□□□□□ -0.76
C11orf54-202ENST00000354421 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
C11orf54-202ENST00000354421 LRP6O75581 1613 aa10.29□□□□□ -0.76
C11orf54-202ENST00000354421 SPATA31A6Q5VVP1 1343 aa10.28□□□□□ -0.76
C11orf54-202ENST00000354421 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
C11orf54-202ENST00000354421 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
C11orf54-202ENST00000354421 PSEN2P49810 448 aa10.28□□□□□ -0.76
C11orf54-202ENST00000354421 P3H3Q8IVL6 736 aa10.27□□□□□ -0.76
C11orf54-202ENST00000354421 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.77
C11orf54-202ENST00000354421 WASHC2AQ641Q2 1341 aa10.27□□□□□ -0.77
C11orf54-202ENST00000354421 ZNF142P52746 1687 aaPredicted RBP10.27□□□□□ -0.77
C11orf54-202ENST00000354421 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
C11orf54-202ENST00000354421 CDK13Q14004 1512 aaKnown RBP10.26□□□□□ -0.77
C11orf54-202ENST00000354421 MTUS2Q5JR59 1369 aa10.25□□□□□ -0.77
C11orf54-202ENST00000354421 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
C11orf54-202ENST00000354421 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
C11orf54-202ENST00000354421 GCC2Q8IWJ2 1684 aa10.25□□□□□ -0.77
C11orf54-202ENST00000354421 SUPT6HQ7KZ85 1726 aaKnown RBP10.25□□□□□ -0.77
C11orf54-202ENST00000354421 EHBP1L1Q8N3D4 1523 aa10.25□□□□□ -0.77
C11orf54-202ENST00000354421 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
C11orf54-202ENST00000354421 SAMD9Q5K651 1589 aa10.24□□□□□ -0.77
C11orf54-202ENST00000354421 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
C11orf54-202ENST00000354421 NEURL4Q96JN8 1562 aa10.24□□□□□ -0.77
C11orf54-202ENST00000354421 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
C11orf54-202ENST00000354421 DSG2Q14126 1118 aa10.24□□□□□ -0.77
C11orf54-202ENST00000354421 ZBED9Q6R2W3 1325 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 SYNMO15061 1565 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
C11orf54-202ENST00000354421 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 LRRIQ1Q96JM4 1722 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 ABCA8O94911 1581 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 IQGAP2Q13576 1575 aa10.23□□□□□ -0.77
C11orf54-202ENST00000354421 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
C11orf54-202ENST00000354421 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
C11orf54-202ENST00000354421 QTRT2Q9H974 415 aaKnown RBP10.21□□□□□ -0.77
C11orf54-202ENST00000354421 AFF2P51816 1311 aa10.21□□□□□ -0.77
C11orf54-202ENST00000354421 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.78
C11orf54-202ENST00000354421 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.78
C11orf54-202ENST00000354421 AGLP35573 1532 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 MYO3AQ8NEV4 1616 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 A0A0G2JS52 829 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
C11orf54-202ENST00000354421 BCL9LQ86UU0 1499 aa10.2□□□□□ -0.78
C11orf54-202ENST00000354421 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
C11orf54-202ENST00000354421 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms