RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 HS1BP3Q53T59 392 aa9.29□□□□□ -0.92
ATR-201ENST00000350721 ATF7IPQ6VMQ6 1270 aa9.29□□□□□ -0.92
ATR-201ENST00000350721 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
ATR-201ENST00000350721 GPATCH3Q96I76 525 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 SHANK2Q9UPX8 1470 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 FAM13BQ9NYF5 915 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 BCL2L13Q9BXK5 485 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 FGD1P98174 961 aa9.28□□□□□ -0.92
ATR-201ENST00000350721 DHX8Q14562 1220 aaKnown RBP9.27□□□□□ -0.93
ATR-201ENST00000350721 K7ELQ4 463 aaPredicted RBP9.27□□□□□ -0.93
ATR-201ENST00000350721 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
ATR-201ENST00000350721 CCDC34Q96HJ3 373 aa9.27□□□□□ -0.93
ATR-201ENST00000350721 PIK3C2GO75747 1445 aa9.27□□□□□ -0.93
ATR-201ENST00000350721 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
ATR-201ENST00000350721 ADGBQ8N7X0 1667 aa9.26□□□□□ -0.93
ATR-201ENST00000350721 LNPKQ9C0E8 428 aa9.26□□□□□ -0.93
ATR-201ENST00000350721 MAGI1Q96QZ7 1491 aaPredicted RBP9.26□□□□□ -0.93
ATR-201ENST00000350721 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
ATR-201ENST00000350721 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
ATR-201ENST00000350721 ARHGAP5Q13017 1502 aa9.26□□□□□ -0.93
ATR-201ENST00000350721 DIAPH1O60610 1272 aaKnown RBP9.26□□□□□ -0.93
ATR-201ENST00000350721 TPM4P67936 248 aa9.26□□□□□ -0.93
ATR-201ENST00000350721 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
ATR-201ENST00000350721 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
ATR-201ENST00000350721 TAF3Q5VWG9 929 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 PDCP20941 246 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 TBC1D2Q9BYX2 928 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 RUFY2Q8WXA3 655 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 NSD2O96028 1365 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 BCAR3O75815 825 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 MTHFSP49914 203 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 TERF1P54274 439 aa9.25□□□□□ -0.93
ATR-201ENST00000350721 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
ATR-201ENST00000350721 RAPGEF6Q8TEU7 1601 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 RARSP54136 660 aaKnown RBP9.24□□□□□ -0.93
ATR-201ENST00000350721 SCAF11Q99590 1463 aaKnown RBP9.24□□□□□ -0.93
ATR-201ENST00000350721 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 RIPK4P57078 832 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 PDCL2Q8N4E4 241 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 ADGRL2O95490 1459 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 BMP2KLQ5H9B9 411 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
ATR-201ENST00000350721 C8orf34Q49A92 452 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 KLHL40Q2TBA0 621 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 BLMP54132 1417 aaPredicted RBP9.23□□□□□ -0.93
ATR-201ENST00000350721 ALDH1L2Q3SY69 923 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 HDAC1Q13547 482 aaPredicted RBP9.23□□□□□ -0.93
ATR-201ENST00000350721 SNX21Q969T3 373 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 TRAK1Q9UPV9 953 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
ATR-201ENST00000350721 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
ATR-201ENST00000350721 GOLGA6L19H0YKK7 550 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 CCDC66A2RUB6 948 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 MCTP1Q6DN14 999 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 CAVIN1Q6NZI2 390 aaKnown RBP9.22□□□□□ -0.93
ATR-201ENST00000350721 IL16Q14005 1332 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
ATR-201ENST00000350721 WDR62O43379 1518 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
ATR-201ENST00000350721 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.22□□□□□ -0.93
ATR-201ENST00000350721 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 PLEKHH1Q9ULM0 1364 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 C20orf194Q5TEA3 1177 aa9.22□□□□□ -0.93
ATR-201ENST00000350721 KDM2BQ8NHM5 1336 aa9.21□□□□□ -0.94
ATR-201ENST00000350721 GPS2Q13227 327 aa9.21□□□□□ -0.94
ATR-201ENST00000350721 HSP90AB4PQ58FF6 505 aa9.21□□□□□ -0.94
ATR-201ENST00000350721 R3HCC1Q9Y3T6 440 aaKnown RBP9.21□□□□□ -0.94
ATR-201ENST00000350721 WDR33Q9C0J8 1336 aaKnown RBP9.21□□□□□ -0.94
ATR-201ENST00000350721 XRCC6P12956 609 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATR-201ENST00000350721 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
ATR-201ENST00000350721 GGT6Q6P531 493 aa9.2□□□□□ -0.94
ATR-201ENST00000350721 PUS7Q96PZ0 661 aaKnown RBP9.2□□□□□ -0.94
ATR-201ENST00000350721 PZPP20742 1482 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 FAM135AQ9P2D6 1515 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
ATR-201ENST00000350721 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 ATAD2Q6PL18 1390 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 TSPY26PQ9H489 355 aa9.19□□□□□ -0.94
ATR-201ENST00000350721 RPAP2Q8IXW5 612 aaPredicted RBP9.19□□□□□ -0.94
ATR-201ENST00000350721 TEX35Q5T0J7 233 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 BECN2A8MW95 431 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 ERC2O15083 957 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 FCHSD2O94868 740 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 GNAI3P08754 354 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 PRIMPOLQ96LW4 560 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 CAVIN2O95810 425 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 TNNT3P45378 269 aaPredicted RBP9.18□□□□□ -0.94
ATR-201ENST00000350721 KDM5CP41229 1560 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 TESK2Q96S53 571 aa9.18□□□□□ -0.94
ATR-201ENST00000350721 GRIN2AQ12879 1464 aa9.17□□□□□ -0.94
ATR-201ENST00000350721 APBB1O00213 710 aa9.17□□□□□ -0.94
ATR-201ENST00000350721 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
ATR-201ENST00000350721 SMC5Q8IY18 1101 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms