RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 PTPRMP28827 1452 aa19.69■□□□□ 0.74
PBX3-201ENST00000342287 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
PBX3-201ENST00000342287 POGKQ9P215 609 aa19.68■□□□□ 0.74
PBX3-201ENST00000342287 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
PBX3-201ENST00000342287 PARD3Q8TEW0 1356 aa19.67■□□□□ 0.74
PBX3-201ENST00000342287 THEMISQ8N1K5 641 aaPredicted RBP19.67■□□□□ 0.74
PBX3-201ENST00000342287 LRPPRCP42704 1394 aaKnown RBP19.67■□□□□ 0.74
PBX3-201ENST00000342287 EID1Q9Y6B2 187 aa19.66■□□□□ 0.74
PBX3-201ENST00000342287 MYOM1P52179 1685 aa19.66■□□□□ 0.74
PBX3-201ENST00000342287 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
PBX3-201ENST00000342287 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
PBX3-201ENST00000342287 CC2D1BQ5T0F9 858 aaKnown RBP19.65■□□□□ 0.74
PBX3-201ENST00000342287 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
PBX3-201ENST00000342287 ABCC11Q96J66 1382 aa19.65■□□□□ 0.74
PBX3-201ENST00000342287 LTKP29376 864 aa19.65■□□□□ 0.74
PBX3-201ENST00000342287 SETD1AO15047 1707 aaKnown RBP19.64■□□□□ 0.73
PBX3-201ENST00000342287 TMC1Q8TDI8 760 aa19.64■□□□□ 0.73
PBX3-201ENST00000342287 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
PBX3-201ENST00000342287 RIMS1Q86UR5 1692 aaKnown RBP19.63■□□□□ 0.73
PBX3-201ENST00000342287 FAM9BQ8IZU0 186 aa19.63■□□□□ 0.73
PBX3-201ENST00000342287 DLC1Q96QB1 1528 aa19.63■□□□□ 0.73
PBX3-201ENST00000342287 METP08581 1390 aa19.63■□□□□ 0.73
PBX3-201ENST00000342287 SLIT1O75093 1534 aa19.63■□□□□ 0.73
PBX3-201ENST00000342287 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
PBX3-201ENST00000342287 BRD4O60885 1362 aaPredicted RBP19.62■□□□□ 0.73
PBX3-201ENST00000342287 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
PBX3-201ENST00000342287 ARHGAP23Q9P227 1491 aa19.62■□□□□ 0.73
PBX3-201ENST00000342287 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
PBX3-201ENST00000342287 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
PBX3-201ENST00000342287 NPC1L1Q9UHC9 1359 aa19.6■□□□□ 0.73
PBX3-201ENST00000342287 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
PBX3-201ENST00000342287 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
PBX3-201ENST00000342287 SLC12A5Q9H2X9 1139 aa19.6■□□□□ 0.73
PBX3-201ENST00000342287 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
PBX3-201ENST00000342287 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
PBX3-201ENST00000342287 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.73
PBX3-201ENST00000342287 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.73
PBX3-201ENST00000342287 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.73
PBX3-201ENST00000342287 CARD14Q9BXL6 1004 aa19.58■□□□□ 0.73
PBX3-201ENST00000342287 NOP58Q9Y2X3 529 aaKnown RBP19.58■□□□□ 0.73
PBX3-201ENST00000342287 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
PBX3-201ENST00000342287 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
PBX3-201ENST00000342287 TECPR2O15040 1411 aa19.56■□□□□ 0.72
PBX3-201ENST00000342287 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
PBX3-201ENST00000342287 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
PBX3-201ENST00000342287 FAM135BQ49AJ0 1406 aa19.55■□□□□ 0.72
PBX3-201ENST00000342287 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
PBX3-201ENST00000342287 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
PBX3-201ENST00000342287 CDK19Q9BWU1 502 aa19.55■□□□□ 0.72
PBX3-201ENST00000342287 MED14O60244 1454 aa19.54■□□□□ 0.72
PBX3-201ENST00000342287 PLEKHH1Q9ULM0 1364 aa19.54■□□□□ 0.72
PBX3-201ENST00000342287 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
PBX3-201ENST00000342287 SLC26A8Q96RN1 970 aa19.53■□□□□ 0.72
PBX3-201ENST00000342287 ANKRD36BQ8N2N9 1353 aa19.52■□□□□ 0.71
PBX3-201ENST00000342287 KNDC1Q76NI1 1749 aa19.51■□□□□ 0.71
PBX3-201ENST00000342287 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
PBX3-201ENST00000342287 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
PBX3-201ENST00000342287 CPS1P31327 1500 aa19.5■□□□□ 0.71
PBX3-201ENST00000342287 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
PBX3-201ENST00000342287 ANKLE2Q86XL3 938 aa19.48■□□□□ 0.71
PBX3-201ENST00000342287 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
PBX3-201ENST00000342287 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
PBX3-201ENST00000342287 ROBO2Q9HCK4 1378 aa19.47■□□□□ 0.71
PBX3-201ENST00000342287 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
PBX3-201ENST00000342287 DIP2AQ14689 1571 aa19.46■□□□□ 0.71
PBX3-201ENST00000342287 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
PBX3-201ENST00000342287 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
PBX3-201ENST00000342287 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
PBX3-201ENST00000342287 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
PBX3-201ENST00000342287 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
PBX3-201ENST00000342287 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
PBX3-201ENST00000342287 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
PBX3-201ENST00000342287 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
PBX3-201ENST00000342287 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
PBX3-201ENST00000342287 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
PBX3-201ENST00000342287 NSD2O96028 1365 aa19.41■□□□□ 0.7
PBX3-201ENST00000342287 PIK3R4Q99570 1358 aa19.41■□□□□ 0.7
PBX3-201ENST00000342287 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
PBX3-201ENST00000342287 ZMYND15Q9H091 742 aa19.4■□□□□ 0.7
PBX3-201ENST00000342287 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.7
PBX3-201ENST00000342287 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
PBX3-201ENST00000342287 INSRP06213 1382 aa19.39■□□□□ 0.69
PBX3-201ENST00000342287 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
PBX3-201ENST00000342287 ATP7BP35670 1465 aa19.37■□□□□ 0.69
PBX3-201ENST00000342287 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
PBX3-201ENST00000342287 PPIP5K1Q6PFW1 1433 aa19.35■□□□□ 0.69
PBX3-201ENST00000342287 VSIG10Q8N0Z9 540 aa19.35■□□□□ 0.69
PBX3-201ENST00000342287 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.35■□□□□ 0.69
PBX3-201ENST00000342287 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
PBX3-201ENST00000342287 FYB1O15117 783 aa19.33■□□□□ 0.69
PBX3-201ENST00000342287 KCNA6P17658 529 aa19.33■□□□□ 0.69
PBX3-201ENST00000342287 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.69
PBX3-201ENST00000342287 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.69
PBX3-201ENST00000342287 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
PBX3-201ENST00000342287 XRN1Q8IZH2 1706 aaKnown RBP19.33■□□□□ 0.68
PBX3-201ENST00000342287 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
PBX3-201ENST00000342287 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
PBX3-201ENST00000342287 PRR36Q9H6K5 1346 aa19.31■□□□□ 0.68
PBX3-201ENST00000342287 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
PBX3-201ENST00000342287 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms