RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 WDR63Q8IWG1 891 aa14.36□□□□□ -0.11
MUC4-202ENST00000339251 TRPM1Q7Z4N2 1603 aa14.36□□□□□ -0.11
MUC4-202ENST00000339251 IPO8O15397 1037 aaKnown RBP14.35□□□□□ -0.11
MUC4-202ENST00000339251 ANTXR1Q9H6X2 564 aa14.35□□□□□ -0.11
MUC4-202ENST00000339251 E9PCH4 1651 aa14.35□□□□□ -0.11
MUC4-202ENST00000339251 SCAF11Q99590 1463 aaKnown RBP14.35□□□□□ -0.11
MUC4-202ENST00000339251 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
MUC4-202ENST00000339251 SAFB2Q14151 953 aaKnown RBP eCLIP14.35□□□□□ -0.11
MUC4-202ENST00000339251 SKOR2Q2VWA4 1001 aaPredicted RBP14.35□□□□□ -0.11
MUC4-202ENST00000339251 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
MUC4-202ENST00000339251 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
MUC4-202ENST00000339251 PTMSP20962 102 aa14.34□□□□□ -0.11
MUC4-202ENST00000339251 EXOSC9Q06265 439 aaKnown RBP14.34□□□□□ -0.11
MUC4-202ENST00000339251 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.11
MUC4-202ENST00000339251 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
MUC4-202ENST00000339251 PRDM15P57071 1507 aaPredicted RBP14.33□□□□□ -0.12
MUC4-202ENST00000339251 RRP9O43818 475 aaKnown RBP14.33□□□□□ -0.12
MUC4-202ENST00000339251 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
MUC4-202ENST00000339251 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.12
MUC4-202ENST00000339251 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
MUC4-202ENST00000339251 PLA2R1Q13018 1463 aa14.32□□□□□ -0.12
MUC4-202ENST00000339251 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
MUC4-202ENST00000339251 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
MUC4-202ENST00000339251 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
MUC4-202ENST00000339251 TNPO1Q92973 898 aaKnown RBP14.3□□□□□ -0.12
MUC4-202ENST00000339251 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
MUC4-202ENST00000339251 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
MUC4-202ENST00000339251 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
MUC4-202ENST00000339251 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
MUC4-202ENST00000339251 NASPP49321 788 aaPredicted RBP14.29□□□□□ -0.12
MUC4-202ENST00000339251 FSD2A1L4K1 749 aa14.28□□□□□ -0.12
MUC4-202ENST00000339251 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
MUC4-202ENST00000339251 CALD1Q05682 793 aaKnown RBP14.28□□□□□ -0.12
MUC4-202ENST00000339251 ARID3AQ99856 593 aa14.28□□□□□ -0.12
MUC4-202ENST00000339251 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
MUC4-202ENST00000339251 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
MUC4-202ENST00000339251 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
MUC4-202ENST00000339251 ZMYND15Q9H091 742 aa14.27□□□□□ -0.13
MUC4-202ENST00000339251 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.13
MUC4-202ENST00000339251 TMEM132EQ6IEE7 984 aa14.27□□□□□ -0.13
MUC4-202ENST00000339251 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.13
MUC4-202ENST00000339251 SSH1Q8WYL5 1049 aa14.27□□□□□ -0.13
MUC4-202ENST00000339251 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
MUC4-202ENST00000339251 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
MUC4-202ENST00000339251 TRIM27P14373 513 aa14.26□□□□□ -0.13
MUC4-202ENST00000339251 CDC42BPAQ5VT25 1732 aa14.26□□□□□ -0.13
MUC4-202ENST00000339251 RIPK4P57078 832 aa14.26□□□□□ -0.13
MUC4-202ENST00000339251 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
MUC4-202ENST00000339251 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
MUC4-202ENST00000339251 TPM2P07951 284 aa14.26□□□□□ -0.13
MUC4-202ENST00000339251 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
MUC4-202ENST00000339251 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
MUC4-202ENST00000339251 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
MUC4-202ENST00000339251 ARHGEF5Q12774 1597 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
MUC4-202ENST00000339251 STK26Q9P289 416 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 SHROOM2Q13796 1616 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 APBB1O00213 710 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 CCDC173Q0VFZ6 552 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 ZBTB7CA1YPR0 619 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 CHD1LQ86WJ1 897 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 KIF16BQ96L93 1317 aa14.24□□□□□ -0.13
MUC4-202ENST00000339251 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
MUC4-202ENST00000339251 FAM13BQ9NYF5 915 aa14.23□□□□□ -0.13
MUC4-202ENST00000339251 K7ELQ4 463 aaPredicted RBP14.23□□□□□ -0.13
MUC4-202ENST00000339251 RBM10P98175 930 aaKnown RBP14.23□□□□□ -0.13
MUC4-202ENST00000339251 HDAC1Q13547 482 aaPredicted RBP14.22□□□□□ -0.13
MUC4-202ENST00000339251 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
MUC4-202ENST00000339251 ABCA8O94911 1581 aa14.22□□□□□ -0.13
MUC4-202ENST00000339251 CT47B1P0C2W7 299 aaPredicted RBP14.22□□□□□ -0.13
MUC4-202ENST00000339251 SSFA2P28290 1259 aa14.22□□□□□ -0.13
MUC4-202ENST00000339251 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
MUC4-202ENST00000339251 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
MUC4-202ENST00000339251 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
MUC4-202ENST00000339251 TPRNQ4KMQ1 711 aa14.21□□□□□ -0.13
MUC4-202ENST00000339251 FOXD4L5Q5VV16 416 aaPredicted RBP14.21□□□□□ -0.13
MUC4-202ENST00000339251 CAVIN1Q6NZI2 390 aaKnown RBP14.21□□□□□ -0.13
MUC4-202ENST00000339251 FOXD4L4Q8WXT5 416 aaPredicted RBP14.21□□□□□ -0.13
MUC4-202ENST00000339251 GGT6Q6P531 493 aa14.21□□□□□ -0.13
MUC4-202ENST00000339251 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
MUC4-202ENST00000339251 DUOX2Q9NRD8 1548 aa14.21□□□□□ -0.14
MUC4-202ENST00000339251 SYNMO15061 1565 aa14.2□□□□□ -0.14
MUC4-202ENST00000339251 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
MUC4-202ENST00000339251 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
MUC4-202ENST00000339251 CABP2Q9NPB3 220 aa14.2□□□□□ -0.14
MUC4-202ENST00000339251 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
MUC4-202ENST00000339251 ZSCAN30Q86W11 494 aa14.2□□□□□ -0.14
MUC4-202ENST00000339251 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
MUC4-202ENST00000339251 GAS2L3Q86XJ1 694 aa14.19□□□□□ -0.14
MUC4-202ENST00000339251 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
MUC4-202ENST00000339251 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
MUC4-202ENST00000339251 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
MUC4-202ENST00000339251 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
MUC4-202ENST00000339251 SNX21Q969T3 373 aa14.18□□□□□ -0.14
MUC4-202ENST00000339251 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
MUC4-202ENST00000339251 SMC5Q8IY18 1101 aa14.18□□□□□ -0.14
MUC4-202ENST00000339251 CDC45O75419 566 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms