RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ZNF142P52746 1687 aaPredicted RBP25.82■■□□□ 1.72
CHMP6-201ENST00000325167 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
CHMP6-201ENST00000325167 BLMP54132 1417 aaPredicted RBP25.82■■□□□ 1.72
CHMP6-201ENST00000325167 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
CHMP6-201ENST00000325167 TNRQ92752 1358 aa25.81■■□□□ 1.72
CHMP6-201ENST00000325167 PDE3BQ13370 1112 aa25.8■■□□□ 1.72
CHMP6-201ENST00000325167 USP32Q8NFA0 1604 aa25.8■■□□□ 1.72
CHMP6-201ENST00000325167 DLC1Q96QB1 1528 aa25.79■■□□□ 1.72
CHMP6-201ENST00000325167 TULP4Q9NRJ4 1543 aa25.79■■□□□ 1.72
CHMP6-201ENST00000325167 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
CHMP6-201ENST00000325167 ATAD2Q6PL18 1390 aa25.76■■□□□ 1.71
CHMP6-201ENST00000325167 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
CHMP6-201ENST00000325167 ANKRD36BQ8N2N9 1353 aa25.76■■□□□ 1.71
CHMP6-201ENST00000325167 NCKAP5LQ9HCH0 1330 aa25.75■■□□□ 1.71
CHMP6-201ENST00000325167 WDR43Q15061 677 aaKnown RBP eCLIP25.75■■□□□ 1.71
CHMP6-201ENST00000325167 NSD2O96028 1365 aa25.75■■□□□ 1.71
CHMP6-201ENST00000325167 NSD3Q9BZ95 1437 aa25.74■■□□□ 1.71
CHMP6-201ENST00000325167 POGKQ9P215 609 aa25.74■■□□□ 1.71
CHMP6-201ENST00000325167 STK26Q9P289 416 aa25.73■■□□□ 1.71
CHMP6-201ENST00000325167 NLRP1Q9C000 1473 aa25.73■■□□□ 1.71
CHMP6-201ENST00000325167 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
CHMP6-201ENST00000325167 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
CHMP6-201ENST00000325167 ABCC11Q96J66 1382 aa25.7■■□□□ 1.7
CHMP6-201ENST00000325167 PRAM1Q96QH2 718 aa25.7■■□□□ 1.7
CHMP6-201ENST00000325167 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
CHMP6-201ENST00000325167 SRPK2P78362 688 aaKnown RBP25.66■■□□□ 1.7
CHMP6-201ENST00000325167 SIRT1Q96EB6 747 aa25.66■■□□□ 1.7
CHMP6-201ENST00000325167 POLR3AO14802 1390 aaPredicted RBP25.66■■□□□ 1.7
CHMP6-201ENST00000325167 TMEM2Q9UHN6 1383 aa25.66■■□□□ 1.7
CHMP6-201ENST00000325167 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
CHMP6-201ENST00000325167 UBR1Q8IWV7 1749 aa25.65■■□□□ 1.7
CHMP6-201ENST00000325167 BCANQ96GW7 911 aa25.64■■□□□ 1.7
CHMP6-201ENST00000325167 ADAMTS8Q9UP79 889 aa25.64■■□□□ 1.7
CHMP6-201ENST00000325167 RNF123Q5XPI4 1314 aa25.64■■□□□ 1.7
CHMP6-201ENST00000325167 NGEFQ8N5V2 710 aa25.64■■□□□ 1.69
CHMP6-201ENST00000325167 CABP2Q9NPB3 220 aa25.64■■□□□ 1.69
CHMP6-201ENST00000325167 TERF2IPQ9NYB0 399 aa25.64■■□□□ 1.69
CHMP6-201ENST00000325167 NRXN3Q9Y4C0 1643 aa25.63■■□□□ 1.69
CHMP6-201ENST00000325167 LTBP4Q8N2S1 1624 aa25.62■■□□□ 1.69
CHMP6-201ENST00000325167 SAFB2Q14151 953 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHMP6-201ENST00000325167 MINK1Q8N4C8 1332 aaPredicted RBP25.61■■□□□ 1.69
CHMP6-201ENST00000325167 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
CHMP6-201ENST00000325167 TECPR2O15040 1411 aa25.6■■□□□ 1.69
CHMP6-201ENST00000325167 FAM135BQ49AJ0 1406 aa25.6■■□□□ 1.69
CHMP6-201ENST00000325167 PPP4R2Q9NY27 417 aa25.59■■□□□ 1.69
CHMP6-201ENST00000325167 ZNF335Q9H4Z2 1342 aaPredicted RBP25.58■■□□□ 1.69
CHMP6-201ENST00000325167 MED14O60244 1454 aa25.56■■□□□ 1.68
CHMP6-201ENST00000325167 HDGFL2Q7Z4V5 671 aaPredicted RBP25.56■■□□□ 1.68
CHMP6-201ENST00000325167 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
CHMP6-201ENST00000325167 A0A1W2PP64 1363 aa25.56■■□□□ 1.68
CHMP6-201ENST00000325167 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
CHMP6-201ENST00000325167 CFAP53Q96M91 514 aa25.55■■□□□ 1.68
CHMP6-201ENST00000325167 CPS1P31327 1500 aa25.54■■□□□ 1.68
CHMP6-201ENST00000325167 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
CHMP6-201ENST00000325167 ATP7BP35670 1465 aa25.52■■□□□ 1.68
CHMP6-201ENST00000325167 METP08581 1390 aa25.52■■□□□ 1.68
CHMP6-201ENST00000325167 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
CHMP6-201ENST00000325167 EID1Q9Y6B2 187 aa25.52■■□□□ 1.68
CHMP6-201ENST00000325167 SLIT1O75093 1534 aa25.51■■□□□ 1.67
CHMP6-201ENST00000325167 IRX6P78412 446 aaPredicted RBP25.49■■□□□ 1.67
CHMP6-201ENST00000325167 ANKLE2Q86XL3 938 aa25.49■■□□□ 1.67
CHMP6-201ENST00000325167 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
CHMP6-201ENST00000325167 RCAN3Q9UKA8 241 aa25.48■■□□□ 1.67
CHMP6-201ENST00000325167 CD163L1Q9NR16 1453 aa25.48■■□□□ 1.67
CHMP6-201ENST00000325167 ARHGAP23Q9P227 1491 aa25.48■■□□□ 1.67
CHMP6-201ENST00000325167 ADAMTS13Q76LX8 1427 aa25.47■■□□□ 1.67
CHMP6-201ENST00000325167 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
CHMP6-201ENST00000325167 WAPLQ7Z5K2 1190 aa25.47■■□□□ 1.67
CHMP6-201ENST00000325167 WASLO00401 505 aaPredicted RBP25.46■■□□□ 1.67
CHMP6-201ENST00000325167 ZNF521Q96K83 1311 aa25.45■■□□□ 1.67
CHMP6-201ENST00000325167 PLEKHH1Q9ULM0 1364 aa25.45■■□□□ 1.67
CHMP6-201ENST00000325167 TXNDC2Q86VQ3 553 aa25.45■■□□□ 1.66
CHMP6-201ENST00000325167 GOLGA2Q08379 1002 aa25.44■■□□□ 1.66
CHMP6-201ENST00000325167 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
CHMP6-201ENST00000325167 MTHFSP49914 203 aa25.43■■□□□ 1.66
CHMP6-201ENST00000325167 NPHP4O75161 1426 aaPredicted RBP25.43■■□□□ 1.66
CHMP6-201ENST00000325167 NCBP3Q53F19 620 aaKnown RBP25.42■■□□□ 1.66
CHMP6-201ENST00000325167 CABP1Q9NZU7 370 aa25.42■■□□□ 1.66
CHMP6-201ENST00000325167 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
CHMP6-201ENST00000325167 IQSEC2Q5JU85 1478 aa25.42■■□□□ 1.66
CHMP6-201ENST00000325167 RRP1P56182 461 aaKnown RBP25.42■■□□□ 1.66
CHMP6-201ENST00000325167 SHPRHQ149N8 1683 aa25.41■■□□□ 1.66
CHMP6-201ENST00000325167 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
CHMP6-201ENST00000325167 ADGRB2O60241 1585 aa25.39■■□□□ 1.66
CHMP6-201ENST00000325167 FYB1O15117 783 aa25.39■■□□□ 1.66
CHMP6-201ENST00000325167 LTKP29376 864 aa25.39■■□□□ 1.66
CHMP6-201ENST00000325167 TNNT2P45379 298 aaPredicted RBP25.39■■□□□ 1.66
CHMP6-201ENST00000325167 TBX22Q9Y458 520 aa25.39■■□□□ 1.65
CHMP6-201ENST00000325167 RUNDC1Q96C34 613 aa25.38■■□□□ 1.65
CHMP6-201ENST00000325167 KIF20BQ96Q89 1820 aa25.38■■□□□ 1.65
CHMP6-201ENST00000325167 APAF1O14727 1248 aa25.37■■□□□ 1.65
CHMP6-201ENST00000325167 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
CHMP6-201ENST00000325167 CPSF1Q10570 1443 aaKnown RBP25.36■■□□□ 1.65
CHMP6-201ENST00000325167 CCDC61Q9Y6R9 512 aa25.36■■□□□ 1.65
CHMP6-201ENST00000325167 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
CHMP6-201ENST00000325167 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
CHMP6-201ENST00000325167 GGNBP2Q9H3C7 697 aa25.35■■□□□ 1.65
CHMP6-201ENST00000325167 E9PSI1 815 aa25.34■■□□□ 1.65
CHMP6-201ENST00000325167 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
CHMP6-201ENST00000325167 DUSP27Q5VZP5 1158 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms