RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
PHTF2-203ENST00000307305 KCNJ4P48050 445 aa14.1□□□□□ -0.15
PHTF2-203ENST00000307305 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
PHTF2-203ENST00000307305 ATP10BO94823 1461 aa14.1□□□□□ -0.15
PHTF2-203ENST00000307305 WDR62O43379 1518 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 DCTN1Q14203 1278 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 MCM4P33991 863 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 DDX11L8A8MPP1 907 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
PHTF2-203ENST00000307305 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
PHTF2-203ENST00000307305 RSPH6AQ9H0K4 717 aa14.08□□□□□ -0.16
PHTF2-203ENST00000307305 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
PHTF2-203ENST00000307305 PANK2Q9BZ23 570 aa14.07□□□□□ -0.16
PHTF2-203ENST00000307305 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
PHTF2-203ENST00000307305 RNF214Q8ND24 703 aa14.07□□□□□ -0.16
PHTF2-203ENST00000307305 NAP1L2Q9ULW6 460 aaPredicted RBP14.06□□□□□ -0.16
PHTF2-203ENST00000307305 TRIM27P14373 513 aa14.06□□□□□ -0.16
PHTF2-203ENST00000307305 HSP90AA2PQ14568 343 aaPredicted RBP14.06□□□□□ -0.16
PHTF2-203ENST00000307305 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
PHTF2-203ENST00000307305 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
PHTF2-203ENST00000307305 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
PHTF2-203ENST00000307305 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
PHTF2-203ENST00000307305 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
PHTF2-203ENST00000307305 COG3Q96JB2 828 aa14.04□□□□□ -0.16
PHTF2-203ENST00000307305 A0A0G2JS52 829 aa14.04□□□□□ -0.16
PHTF2-203ENST00000307305 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
PHTF2-203ENST00000307305 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
PHTF2-203ENST00000307305 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
PHTF2-203ENST00000307305 MIS18AQ9NYP9 233 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 DISP1Q96F81 1524 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 WAPLQ7Z5K2 1190 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
PHTF2-203ENST00000307305 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.16
PHTF2-203ENST00000307305 TWISTNBQ3B726 338 aaPredicted RBP14.02□□□□□ -0.17
PHTF2-203ENST00000307305 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
PHTF2-203ENST00000307305 SAMD9Q5K651 1589 aa14.02□□□□□ -0.17
PHTF2-203ENST00000307305 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
PHTF2-203ENST00000307305 KIF14Q15058 1648 aa14.02□□□□□ -0.17
PHTF2-203ENST00000307305 BCL11BQ9C0K0 894 aaPredicted RBP14.02□□□□□ -0.17
PHTF2-203ENST00000307305 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
PHTF2-203ENST00000307305 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
PHTF2-203ENST00000307305 ST18O60284 1047 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
PHTF2-203ENST00000307305 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 AMPHP49418 695 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 CDK19Q9BWU1 502 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 KDM5BQ9UGL1 1544 aa14.01□□□□□ -0.17
PHTF2-203ENST00000307305 SMARCA5O60264 1052 aaPredicted RBP14.01□□□□□ -0.17
PHTF2-203ENST00000307305 NGDNQ8NEJ9 315 aaKnown RBP14.01□□□□□ -0.17
PHTF2-203ENST00000307305 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
PHTF2-203ENST00000307305 MCCP23508 829 aa14□□□□□ -0.17
PHTF2-203ENST00000307305 TXNDC2Q86VQ3 553 aa14□□□□□ -0.17
PHTF2-203ENST00000307305 FGD1P98174 961 aa14□□□□□ -0.17
PHTF2-203ENST00000307305 A2MP01023 1474 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
PHTF2-203ENST00000307305 MRE11P49959 708 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 FAM43AQ8N2R8 423 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
PHTF2-203ENST00000307305 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
PHTF2-203ENST00000307305 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 GNAI1P63096 354 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
PHTF2-203ENST00000307305 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 HMMRO75330 724 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
PHTF2-203ENST00000307305 KIAA1211Q6ZU35 1233 aa13.98□□□□□ -0.17
PHTF2-203ENST00000307305 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
PHTF2-203ENST00000307305 RBM10P98175 930 aaKnown RBP13.97□□□□□ -0.17
PHTF2-203ENST00000307305 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
PHTF2-203ENST00000307305 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
PHTF2-203ENST00000307305 NEK4P51957 841 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.17
PHTF2-203ENST00000307305 NOS1P29475 1434 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 SSFA2P28290 1259 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
PHTF2-203ENST00000307305 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 GOLGA6L4A6NEF3 574 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 CDC45O75419 566 aa13.96□□□□□ -0.17
PHTF2-203ENST00000307305 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.18
PHTF2-203ENST00000307305 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 MAP4K4O95819 1239 aaPredicted RBP13.95□□□□□ -0.18
PHTF2-203ENST00000307305 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
PHTF2-203ENST00000307305 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 TNPO1Q92973 898 aaKnown RBP13.95□□□□□ -0.18
PHTF2-203ENST00000307305 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 MCM10Q7L590 875 aa13.95□□□□□ -0.18
PHTF2-203ENST00000307305 IDI1Q13907 227 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms