RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
TEFM-201ENST00000306049 LAMC1P11047 1609 aa14.55□□□□□ -0.08
TEFM-201ENST00000306049 SF3B2Q13435 895 aaKnown RBP14.54□□□□□ -0.08
TEFM-201ENST00000306049 ZNF326Q5BKZ1 582 aaKnown RBP14.54□□□□□ -0.08
TEFM-201ENST00000306049 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
TEFM-201ENST00000306049 CLTCL1P53675 1640 aa14.54□□□□□ -0.08
TEFM-201ENST00000306049 NEXMIFQ5QGS0 1516 aa14.53□□□□□ -0.08
TEFM-201ENST00000306049 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
TEFM-201ENST00000306049 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
TEFM-201ENST00000306049 SOS2Q07890 1332 aaPredicted RBP14.5□□□□□ -0.09
TEFM-201ENST00000306049 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
TEFM-201ENST00000306049 ITGAEP38570 1179 aa14.49□□□□□ -0.09
TEFM-201ENST00000306049 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
TEFM-201ENST00000306049 MARF1Q9Y4F3 1742 aaKnown RBP14.49□□□□□ -0.09
TEFM-201ENST00000306049 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
TEFM-201ENST00000306049 ORAI2Q96SN7 254 aa14.47□□□□□ -0.09
TEFM-201ENST00000306049 COL22A1Q8NFW1 1626 aaPredicted RBP14.47□□□□□ -0.09
TEFM-201ENST00000306049 HRCP23327 699 aa14.46□□□□□ -0.09
TEFM-201ENST00000306049 BRWD3Q6RI45 1802 aa14.45□□□□□ -0.1
TEFM-201ENST00000306049 PPLO60437 1756 aa14.45□□□□□ -0.1
TEFM-201ENST00000306049 ROBO2Q9HCK4 1378 aa14.44□□□□□ -0.1
TEFM-201ENST00000306049 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.43□□□□□ -0.1
TEFM-201ENST00000306049 MYOM2P54296 1465 aa14.43□□□□□ -0.1
TEFM-201ENST00000306049 UNC5CLQ8IV45 518 aa14.42□□□□□ -0.1
TEFM-201ENST00000306049 RALGAPBQ86X10 1494 aa14.42□□□□□ -0.1
TEFM-201ENST00000306049 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
TEFM-201ENST00000306049 YY1P25490 414 aa14.41□□□□□ -0.1
TEFM-201ENST00000306049 GLI3P10071 1580 aa14.41□□□□□ -0.1
TEFM-201ENST00000306049 BAG6P46379 1132 aa14.4□□□□□ -0.1
TEFM-201ENST00000306049 SEPT12Q8IYM1 358 aa14.4□□□□□ -0.1
TEFM-201ENST00000306049 NPHP3Q7Z494 1330 aa14.4□□□□□ -0.1
TEFM-201ENST00000306049 CDC42BPGQ6DT37 1551 aa14.39□□□□□ -0.11
TEFM-201ENST00000306049 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
TEFM-201ENST00000306049 HFM1A2PYH4 1435 aa14.39□□□□□ -0.11
TEFM-201ENST00000306049 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
TEFM-201ENST00000306049 PXDNQ92626 1479 aa14.38□□□□□ -0.11
TEFM-201ENST00000306049 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
TEFM-201ENST00000306049 KRT27Q7Z3Y8 459 aa14.37□□□□□ -0.11
TEFM-201ENST00000306049 XPCQ01831 940 aaPredicted RBP14.36□□□□□ -0.11
TEFM-201ENST00000306049 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
TEFM-201ENST00000306049 NAIPQ13075 1403 aa14.35□□□□□ -0.11
TEFM-201ENST00000306049 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
TEFM-201ENST00000306049 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
TEFM-201ENST00000306049 SLIT2O94813 1529 aa14.35□□□□□ -0.11
TEFM-201ENST00000306049 FOXO3O43524 673 aa14.34□□□□□ -0.11
TEFM-201ENST00000306049 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
TEFM-201ENST00000306049 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
TEFM-201ENST00000306049 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
TEFM-201ENST00000306049 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
TEFM-201ENST00000306049 A0A0G2JS52 829 aa14.33□□□□□ -0.12
TEFM-201ENST00000306049 MYT1Q01538 1121 aa14.33□□□□□ -0.12
TEFM-201ENST00000306049 LRPPRCP42704 1394 aaKnown RBP14.33□□□□□ -0.12
TEFM-201ENST00000306049 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
TEFM-201ENST00000306049 EN1Q05925 392 aaPredicted RBP14.32□□□□□ -0.12
TEFM-201ENST00000306049 VPS72Q15906 364 aa14.32□□□□□ -0.12
TEFM-201ENST00000306049 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
TEFM-201ENST00000306049 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
TEFM-201ENST00000306049 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
TEFM-201ENST00000306049 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
TEFM-201ENST00000306049 USP32Q8NFA0 1604 aa14.3□□□□□ -0.12
TEFM-201ENST00000306049 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
TEFM-201ENST00000306049 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
TEFM-201ENST00000306049 TECPR2O15040 1411 aa14.28□□□□□ -0.12
TEFM-201ENST00000306049 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
TEFM-201ENST00000306049 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
TEFM-201ENST00000306049 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
TEFM-201ENST00000306049 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
TEFM-201ENST00000306049 ABCA3Q99758 1704 aa14.27□□□□□ -0.12
TEFM-201ENST00000306049 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.12
TEFM-201ENST00000306049 ADGRF5Q8IZF2 1346 aa14.27□□□□□ -0.12
TEFM-201ENST00000306049 STK26Q9P289 416 aa14.27□□□□□ -0.13
TEFM-201ENST00000306049 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
TEFM-201ENST00000306049 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
TEFM-201ENST00000306049 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
TEFM-201ENST00000306049 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
TEFM-201ENST00000306049 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
TEFM-201ENST00000306049 ABCC11Q96J66 1382 aa14.24□□□□□ -0.13
TEFM-201ENST00000306049 FAM98CQ17RN3 349 aaKnown RBP14.24□□□□□ -0.13
TEFM-201ENST00000306049 EZH2Q15910 746 aaKnown RBP14.23□□□□□ -0.13
TEFM-201ENST00000306049 FAM182BQ5T319 152 aa14.23□□□□□ -0.13
TEFM-201ENST00000306049 KRT28Q7Z3Y7 464 aa14.23□□□□□ -0.13
TEFM-201ENST00000306049 RGL3Q3MIN7 710 aa14.22□□□□□ -0.13
TEFM-201ENST00000306049 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
TEFM-201ENST00000306049 CABLES1Q8TDN4 633 aa14.22□□□□□ -0.13
TEFM-201ENST00000306049 SPATA31E1Q6ZUB1 1445 aa14.22□□□□□ -0.13
TEFM-201ENST00000306049 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
TEFM-201ENST00000306049 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
TEFM-201ENST00000306049 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.13
TEFM-201ENST00000306049 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
TEFM-201ENST00000306049 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.13
TEFM-201ENST00000306049 YTHDC2Q9H6S0 1430 aaKnown RBP14.21□□□□□ -0.13
TEFM-201ENST00000306049 DISP2A7MBM2 1401 aa14.2□□□□□ -0.14
TEFM-201ENST00000306049 NRAPQ86VF7 1730 aa14.2□□□□□ -0.14
TEFM-201ENST00000306049 TNS1Q9HBL0 1735 aaKnown RBP14.19□□□□□ -0.14
TEFM-201ENST00000306049 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
TEFM-201ENST00000306049 PSME1Q06323 249 aa14.19□□□□□ -0.14
TEFM-201ENST00000306049 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
TEFM-201ENST00000306049 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
TEFM-201ENST00000306049 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
TEFM-201ENST00000306049 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms