RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 THEMISQ8N1K5 641 aaPredicted RBP7.98□□□□□ -1.13
TTC39C-201ENST00000304621 PRAM1Q96QH2 718 aa7.98□□□□□ -1.13
TTC39C-201ENST00000304621 KNDC1Q76NI1 1749 aa7.98□□□□□ -1.13
TTC39C-201ENST00000304621 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
TTC39C-201ENST00000304621 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
TTC39C-201ENST00000304621 CNGB1Q14028 1251 aaPredicted RBP7.98□□□□□ -1.13
TTC39C-201ENST00000304621 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
TTC39C-201ENST00000304621 SLC26A8Q96RN1 970 aa7.98□□□□□ -1.13
TTC39C-201ENST00000304621 KDM4FA0A1W2PPD8 638 aa7.97□□□□□ -1.13
TTC39C-201ENST00000304621 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
TTC39C-201ENST00000304621 BCANQ96GW7 911 aa7.97□□□□□ -1.13
TTC39C-201ENST00000304621 PRKRIP1Q9H875 184 aaPredicted RBP7.97□□□□□ -1.13
TTC39C-201ENST00000304621 PANK3Q9H999 370 aa7.97□□□□□ -1.13
TTC39C-201ENST00000304621 ABCC11Q96J66 1382 aa7.97□□□□□ -1.13
TTC39C-201ENST00000304621 CPS1P31327 1500 aa7.97□□□□□ -1.13
TTC39C-201ENST00000304621 YTHDC1Q96MU7 727 aaKnown RBP7.97□□□□□ -1.13
TTC39C-201ENST00000304621 TECPR2O15040 1411 aa7.96□□□□□ -1.13
TTC39C-201ENST00000304621 MINK1Q8N4C8 1332 aaPredicted RBP7.96□□□□□ -1.13
TTC39C-201ENST00000304621 EID1Q9Y6B2 187 aa7.96□□□□□ -1.13
TTC39C-201ENST00000304621 ROBO2Q9HCK4 1378 aa7.96□□□□□ -1.14
TTC39C-201ENST00000304621 SAMD1Q6SPF0 538 aaPredicted RBP7.96□□□□□ -1.14
TTC39C-201ENST00000304621 CABP2Q9NPB3 220 aa7.95□□□□□ -1.14
TTC39C-201ENST00000304621 POGKQ9P215 609 aa7.95□□□□□ -1.14
TTC39C-201ENST00000304621 DIP2AQ14689 1571 aa7.95□□□□□ -1.14
TTC39C-201ENST00000304621 CCER2I3L3R5 266 aa7.95□□□□□ -1.14
TTC39C-201ENST00000304621 SETD1BQ9UPS6 1966 aaKnown RBP7.94□□□□□ -1.14
TTC39C-201ENST00000304621 CDCA8Q53HL2 280 aa7.94□□□□□ -1.14
TTC39C-201ENST00000304621 CARD14Q9BXL6 1004 aa7.94□□□□□ -1.14
TTC39C-201ENST00000304621 XRN1Q8IZH2 1706 aaKnown RBP7.94□□□□□ -1.14
TTC39C-201ENST00000304621 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.94□□□□□ -1.14
TTC39C-201ENST00000304621 EVC2Q86UK5 1308 aa7.94□□□□□ -1.14
TTC39C-201ENST00000304621 SLC12A5Q9H2X9 1139 aa7.94□□□□□ -1.14
TTC39C-201ENST00000304621 TBX22Q9Y458 520 aa7.94□□□□□ -1.14
TTC39C-201ENST00000304621 FAM135BQ49AJ0 1406 aa7.93□□□□□ -1.14
TTC39C-201ENST00000304621 NCKAP5LQ9HCH0 1330 aa7.93□□□□□ -1.14
TTC39C-201ENST00000304621 ANKLE2Q86XL3 938 aa7.92□□□□□ -1.14
TTC39C-201ENST00000304621 AMER1Q5JTC6 1135 aaPredicted RBP7.92□□□□□ -1.14
TTC39C-201ENST00000304621 CC2D1BQ5T0F9 858 aaKnown RBP7.92□□□□□ -1.14
TTC39C-201ENST00000304621 CDK19Q9BWU1 502 aa7.92□□□□□ -1.14
TTC39C-201ENST00000304621 AMOTL2Q9Y2J4 779 aa7.92□□□□□ -1.14
TTC39C-201ENST00000304621 PARD3Q8TEW0 1356 aa7.92□□□□□ -1.14
TTC39C-201ENST00000304621 CD163L1Q9NR16 1453 aa7.92□□□□□ -1.14
TTC39C-201ENST00000304621 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
TTC39C-201ENST00000304621 NPHP4O75161 1426 aaPredicted RBP7.91□□□□□ -1.14
TTC39C-201ENST00000304621 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
TTC39C-201ENST00000304621 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
TTC39C-201ENST00000304621 PUS7Q96PZ0 661 aaKnown RBP7.91□□□□□ -1.14
TTC39C-201ENST00000304621 KTN1Q86UP2 1357 aaKnown RBP7.9□□□□□ -1.14
TTC39C-201ENST00000304621 ADGRB2O60241 1585 aa7.9□□□□□ -1.14
TTC39C-201ENST00000304621 CHD2O14647 1828 aaKnown RBP7.9□□□□□ -1.14
TTC39C-201ENST00000304621 PTCH1Q13635 1447 aa7.9□□□□□ -1.14
TTC39C-201ENST00000304621 NSD3Q9BZ95 1437 aa7.9□□□□□ -1.14
TTC39C-201ENST00000304621 KCNA6P17658 529 aa7.9□□□□□ -1.15
TTC39C-201ENST00000304621 HSPA2P54652 639 aa7.9□□□□□ -1.15
TTC39C-201ENST00000304621 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 WASLO00401 505 aaPredicted RBP7.89□□□□□ -1.15
TTC39C-201ENST00000304621 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 KNSTRNQ9Y448 316 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 A0A1W2PP64 1363 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 ANKRD36BQ8N2N9 1353 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 RALBP1Q15311 655 aa7.89□□□□□ -1.15
TTC39C-201ENST00000304621 MYBBP1AQ9BQG0 1328 aaKnown RBP7.88□□□□□ -1.15
TTC39C-201ENST00000304621 USP32Q8NFA0 1604 aa7.88□□□□□ -1.15
TTC39C-201ENST00000304621 ATAD2Q6PL18 1390 aa7.88□□□□□ -1.15
TTC39C-201ENST00000304621 ATP7BP35670 1465 aa7.88□□□□□ -1.15
TTC39C-201ENST00000304621 PIK3R4Q99570 1358 aa7.88□□□□□ -1.15
TTC39C-201ENST00000304621 RBM33Q96EV2 1170 aaKnown RBP7.87□□□□□ -1.15
TTC39C-201ENST00000304621 CABP1Q9NZU7 370 aa7.87□□□□□ -1.15
TTC39C-201ENST00000304621 TOPAZ1Q8N9V7 1692 aa7.87□□□□□ -1.15
TTC39C-201ENST00000304621 NPC1L1Q9UHC9 1359 aa7.87□□□□□ -1.15
TTC39C-201ENST00000304621 NALCNQ8IZF0 1738 aa7.87□□□□□ -1.15
TTC39C-201ENST00000304621 NWD1Q149M9 1564 aa7.87□□□□□ -1.15
TTC39C-201ENST00000304621 STRCP1A6NGW2 1772 aa7.86□□□□□ -1.15
TTC39C-201ENST00000304621 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
TTC39C-201ENST00000304621 NKTRP30414 1462 aaKnown RBP7.86□□□□□ -1.15
TTC39C-201ENST00000304621 STRCQ7RTU9 1775 aa7.86□□□□□ -1.15
TTC39C-201ENST00000304621 NUTM2FA1L443 756 aa7.86□□□□□ -1.15
TTC39C-201ENST00000304621 NUDT16Q96DE0 195 aaKnown RBP7.86□□□□□ -1.15
TTC39C-201ENST00000304621 BRD4O60885 1362 aaPredicted RBP7.86□□□□□ -1.15
TTC39C-201ENST00000304621 NINLQ9Y2I6 1382 aa7.86□□□□□ -1.15
TTC39C-201ENST00000304621 CDC42BPGQ6DT37 1551 aa7.85□□□□□ -1.15
TTC39C-201ENST00000304621 ATXN8OSP0DMR3 200 aa7.85□□□□□ -1.15
TTC39C-201ENST00000304621 PPP2R1AP30153 589 aa7.85□□□□□ -1.15
TTC39C-201ENST00000304621 FAM9BQ8IZU0 186 aa7.85□□□□□ -1.15
TTC39C-201ENST00000304621 CPSF1Q10570 1443 aaKnown RBP7.85□□□□□ -1.15
TTC39C-201ENST00000304621 RGPD8O14715 1765 aaPredicted RBP7.85□□□□□ -1.15
TTC39C-201ENST00000304621 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
TTC39C-201ENST00000304621 FMN2Q9NZ56 1722 aa7.84□□□□□ -1.15
TTC39C-201ENST00000304621 NLRP13Q86W25 1043 aa7.84□□□□□ -1.15
TTC39C-201ENST00000304621 PNISRQ8TF01 805 aaKnown RBP7.84□□□□□ -1.15
TTC39C-201ENST00000304621 MON2Q7Z3U7 1717 aa7.84□□□□□ -1.15
TTC39C-201ENST00000304621 CAPN15O75808 1086 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 NRKQ7Z2Y5 1582 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 SPINK5Q9NQ38 1064 aaPredicted RBP7.83□□□□□ -1.16
TTC39C-201ENST00000304621 KIF20BQ96Q89 1820 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 CGNL1Q0VF96 1302 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
TTC39C-201ENST00000304621 CCDC61Q9Y6R9 512 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms