RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.9
TRIM9-201ENST00000298355 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
TRIM9-201ENST00000298355 HNRNPMP52272 730 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRIM9-201ENST00000298355 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
TRIM9-201ENST00000298355 ZKSCAN1P17029 563 aaPredicted RBP20.63■□□□□ 0.89
TRIM9-201ENST00000298355 CCDC70Q6NSX1 233 aa20.63■□□□□ 0.89
TRIM9-201ENST00000298355 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
TRIM9-201ENST00000298355 STK26Q9P289 416 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 SPAG9O60271 1321 aaKnown RBP20.62■□□□□ 0.89
TRIM9-201ENST00000298355 OFD1O75665 1012 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 RIPK4P57078 832 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 SLFN5Q08AF3 891 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 CCDC192P0DO97 292 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 SMAP1Q8IYB5 467 aaPredicted RBP20.62■□□□□ 0.89
TRIM9-201ENST00000298355 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
TRIM9-201ENST00000298355 ROCK1Q13464 1354 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 RUFY2Q8WXA3 655 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 TBC1D32Q96NH3 1257 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 MVPQ14764 893 aaKnown RBP20.61■□□□□ 0.89
TRIM9-201ENST00000298355 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 PRIMPOLQ96LW4 560 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 GORABQ5T7V8 394 aa20.61■□□□□ 0.89
TRIM9-201ENST00000298355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.61■□□□□ 0.89
TRIM9-201ENST00000298355 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
TRIM9-201ENST00000298355 FIBPO43427 364 aa20.6■□□□□ 0.89
TRIM9-201ENST00000298355 GTPBP4Q9BZE4 634 aaKnown RBP20.6■□□□□ 0.89
TRIM9-201ENST00000298355 C8orf34Q49A92 452 aa20.6■□□□□ 0.89
TRIM9-201ENST00000298355 TPM1P09493 284 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 SSFA2P28290 1259 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 CCDC73Q6ZRK6 1079 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 NCOA1Q15788 1441 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
TRIM9-201ENST00000298355 SOX12O15370 315 aa20.58■□□□□ 0.88
TRIM9-201ENST00000298355 NAT10Q9H0A0 1025 aaKnown RBP20.58■□□□□ 0.88
TRIM9-201ENST00000298355 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.88
TRIM9-201ENST00000298355 WDR33Q9C0J8 1336 aaKnown RBP20.58■□□□□ 0.88
TRIM9-201ENST00000298355 AEBP1Q8IUX7 1158 aa20.58■□□□□ 0.88
TRIM9-201ENST00000298355 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
TRIM9-201ENST00000298355 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 FBXW7Q969H0 707 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 CHMP4CQ96CF2 233 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 PLEKHG5O94827 1062 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 KLHL40Q2TBA0 621 aa20.57■□□□□ 0.88
TRIM9-201ENST00000298355 CHD1LQ86WJ1 897 aa20.56■□□□□ 0.88
TRIM9-201ENST00000298355 H0YHG0 523 aa20.56■□□□□ 0.88
TRIM9-201ENST00000298355 CCP110O43303 1012 aa20.56■□□□□ 0.88
TRIM9-201ENST00000298355 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
TRIM9-201ENST00000298355 CASKIN1Q8WXD9 1431 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 TSR1Q2NL82 804 aaKnown RBP20.55■□□□□ 0.88
TRIM9-201ENST00000298355 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 GGT6Q6P531 493 aa20.55■□□□□ 0.88
TRIM9-201ENST00000298355 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
TRIM9-201ENST00000298355 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
TRIM9-201ENST00000298355 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
TRIM9-201ENST00000298355 EXOSC9Q06265 439 aaKnown RBP20.54■□□□□ 0.88
TRIM9-201ENST00000298355 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
TRIM9-201ENST00000298355 TIAM1Q13009 1591 aa20.53■□□□□ 0.88
TRIM9-201ENST00000298355 TIGD1Q96MW7 591 aa20.53■□□□□ 0.88
TRIM9-201ENST00000298355 A0A0G2JS52 829 aa20.52■□□□□ 0.88
TRIM9-201ENST00000298355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRIM9-201ENST00000298355 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
TRIM9-201ENST00000298355 NOB1Q9ULX3 412 aaKnown RBP20.52■□□□□ 0.87
TRIM9-201ENST00000298355 ZKSCAN5Q9Y2L8 839 aa20.51■□□□□ 0.87
TRIM9-201ENST00000298355 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
TRIM9-201ENST00000298355 BAG4O95429 457 aaKnown RBP20.51■□□□□ 0.87
TRIM9-201ENST00000298355 HS1BP3Q53T59 392 aa20.51■□□□□ 0.87
TRIM9-201ENST00000298355 TULP1O00294 542 aaPredicted RBP20.5■□□□□ 0.87
TRIM9-201ENST00000298355 ERC2O15083 957 aa20.5■□□□□ 0.87
TRIM9-201ENST00000298355 PTPRGP23470 1445 aa20.5■□□□□ 0.87
TRIM9-201ENST00000298355 DIAPH1O60610 1272 aaKnown RBP20.5■□□□□ 0.87
TRIM9-201ENST00000298355 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
TRIM9-201ENST00000298355 MAP3K1Q13233 1512 aa20.49■□□□□ 0.87
TRIM9-201ENST00000298355 LRPPRCP42704 1394 aaKnown RBP20.49■□□□□ 0.87
TRIM9-201ENST00000298355 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
TRIM9-201ENST00000298355 RUFY1Q96T51 708 aa20.49■□□□□ 0.87
TRIM9-201ENST00000298355 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
TRIM9-201ENST00000298355 C1orf115Q9H7X2 142 aa20.49■□□□□ 0.87
TRIM9-201ENST00000298355 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 IGHDP01880 384 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 USP25Q9UHP3 1055 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 SMC2O95347 1197 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 GNAI1P63096 354 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
TRIM9-201ENST00000298355 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
TRIM9-201ENST00000298355 SDF4Q9BRK5 362 aa20.48■□□□□ 0.87
TRIM9-201ENST00000298355 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
TRIM9-201ENST00000298355 PES1O00541 588 aaKnown RBP20.47■□□□□ 0.87
TRIM9-201ENST00000298355 KIF3BO15066 747 aa20.47■□□□□ 0.87
TRIM9-201ENST00000298355 DHX8Q14562 1220 aaKnown RBP20.47■□□□□ 0.87
TRIM9-201ENST00000298355 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
TRIM9-201ENST00000298355 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
TRIM9-201ENST00000298355 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms