RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 NSD2O96028 1365 aa12.79□□□□□ -0.36
HMGCR-201ENST00000287936 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
HMGCR-201ENST00000287936 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
HMGCR-201ENST00000287936 BCAR3O75815 825 aa12.79□□□□□ -0.36
HMGCR-201ENST00000287936 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
HMGCR-201ENST00000287936 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
HMGCR-201ENST00000287936 PUS7Q96PZ0 661 aaKnown RBP12.78□□□□□ -0.36
HMGCR-201ENST00000287936 MADDQ8WXG6 1647 aa12.77□□□□□ -0.36
HMGCR-201ENST00000287936 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.36
HMGCR-201ENST00000287936 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 SBNO2Q9Y2G9 1366 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 E9PCH4 1651 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
HMGCR-201ENST00000287936 PANK1Q8TE04 598 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.37
HMGCR-201ENST00000287936 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
HMGCR-201ENST00000287936 RAPGEF3O95398 923 aa12.76□□□□□ -0.37
HMGCR-201ENST00000287936 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
HMGCR-201ENST00000287936 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
HMGCR-201ENST00000287936 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
HMGCR-201ENST00000287936 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
HMGCR-201ENST00000287936 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
HMGCR-201ENST00000287936 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
HMGCR-201ENST00000287936 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
HMGCR-201ENST00000287936 MLECQ14165 292 aa12.74□□□□□ -0.37
HMGCR-201ENST00000287936 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
HMGCR-201ENST00000287936 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
HMGCR-201ENST00000287936 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
HMGCR-201ENST00000287936 POGZQ7Z3K3 1410 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 KIF1BO60333 1816 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
HMGCR-201ENST00000287936 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 RIPK4P57078 832 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
HMGCR-201ENST00000287936 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
HMGCR-201ENST00000287936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
HMGCR-201ENST00000287936 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.38
HMGCR-201ENST00000287936 CEP152O94986 1710 aa12.71□□□□□ -0.38
HMGCR-201ENST00000287936 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.38
HMGCR-201ENST00000287936 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.38
HMGCR-201ENST00000287936 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
HMGCR-201ENST00000287936 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
HMGCR-201ENST00000287936 IDI1Q13907 227 aa12.7□□□□□ -0.38
HMGCR-201ENST00000287936 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
HMGCR-201ENST00000287936 ZNF521Q96K83 1311 aa12.7□□□□□ -0.38
HMGCR-201ENST00000287936 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
HMGCR-201ENST00000287936 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
HMGCR-201ENST00000287936 HSCBQ8IWL3 235 aa12.69□□□□□ -0.38
HMGCR-201ENST00000287936 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
HMGCR-201ENST00000287936 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
HMGCR-201ENST00000287936 INO80Q9ULG1 1556 aaPredicted RBP12.69□□□□□ -0.38
HMGCR-201ENST00000287936 FAM69CQ0P6D2 419 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 NPATQ14207 1427 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 IQGAP1P46940 1657 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 MLH3Q9UHC1 1453 aa12.68□□□□□ -0.38
HMGCR-201ENST00000287936 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
HMGCR-201ENST00000287936 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
HMGCR-201ENST00000287936 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
HMGCR-201ENST00000287936 COG3Q96JB2 828 aa12.67□□□□□ -0.38
HMGCR-201ENST00000287936 NEO1Q92859 1461 aa12.67□□□□□ -0.38
HMGCR-201ENST00000287936 KIAA1210Q9ULL0 1709 aa12.66□□□□□ -0.38
HMGCR-201ENST00000287936 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
HMGCR-201ENST00000287936 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
HMGCR-201ENST00000287936 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
HMGCR-201ENST00000287936 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
HMGCR-201ENST00000287936 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
HMGCR-201ENST00000287936 GSE1Q14687 1217 aa12.66□□□□□ -0.38
HMGCR-201ENST00000287936 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
HMGCR-201ENST00000287936 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
HMGCR-201ENST00000287936 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
HMGCR-201ENST00000287936 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
HMGCR-201ENST00000287936 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
HMGCR-201ENST00000287936 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
HMGCR-201ENST00000287936 GNAI1P63096 354 aa12.64□□□□□ -0.39
HMGCR-201ENST00000287936 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
HMGCR-201ENST00000287936 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
HMGCR-201ENST00000287936 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
HMGCR-201ENST00000287936 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
HMGCR-201ENST00000287936 ABCA6Q8N139 1617 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 FCHSD2O94868 740 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 IL16Q14005 1332 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 ATF7IPQ6VMQ6 1270 aa12.63□□□□□ -0.39
HMGCR-201ENST00000287936 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
HMGCR-201ENST00000287936 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
HMGCR-201ENST00000287936 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
HMGCR-201ENST00000287936 SETBP1Q9Y6X0 1596 aa12.62□□□□□ -0.39
HMGCR-201ENST00000287936 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
HMGCR-201ENST00000287936 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
HMGCR-201ENST00000287936 IGHDP01880 384 aa12.61□□□□□ -0.39
HMGCR-201ENST00000287936 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
HMGCR-201ENST00000287936 ADGRB3O60242 1522 aa12.61□□□□□ -0.39
HMGCR-201ENST00000287936 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
HMGCR-201ENST00000287936 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms