RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
PCDHB3-201ENST00000231130 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
PCDHB3-201ENST00000231130 IFT140Q96RY7 1462 aa17.77■□□□□ 0.43
PCDHB3-201ENST00000231130 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 ARHGAP5Q13017 1502 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 NUTM2DQ5VT03 806 aaPredicted RBP17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
PCDHB3-201ENST00000231130 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
PCDHB3-201ENST00000231130 PRDM4Q9UKN5 801 aa17.75■□□□□ 0.43
PCDHB3-201ENST00000231130 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
PCDHB3-201ENST00000231130 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
PCDHB3-201ENST00000231130 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
PCDHB3-201ENST00000231130 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
PCDHB3-201ENST00000231130 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
PCDHB3-201ENST00000231130 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
PCDHB3-201ENST00000231130 KIF3BO15066 747 aa17.71■□□□□ 0.43
PCDHB3-201ENST00000231130 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
PCDHB3-201ENST00000231130 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
PCDHB3-201ENST00000231130 BBXQ8WY36 941 aaPredicted RBP17.7■□□□□ 0.42
PCDHB3-201ENST00000231130 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
PCDHB3-201ENST00000231130 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
PCDHB3-201ENST00000231130 NLRP1Q9C000 1473 aa17.69■□□□□ 0.42
PCDHB3-201ENST00000231130 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
PCDHB3-201ENST00000231130 GAS2L3Q86XJ1 694 aa17.68■□□□□ 0.42
PCDHB3-201ENST00000231130 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
PCDHB3-201ENST00000231130 TRIM27P14373 513 aa17.68■□□□□ 0.42
PCDHB3-201ENST00000231130 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
PCDHB3-201ENST00000231130 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
PCDHB3-201ENST00000231130 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
PCDHB3-201ENST00000231130 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
PCDHB3-201ENST00000231130 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
PCDHB3-201ENST00000231130 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
PCDHB3-201ENST00000231130 NOB1Q9ULX3 412 aaKnown RBP17.66■□□□□ 0.42
PCDHB3-201ENST00000231130 DDX11L8A8MPP1 907 aa17.66■□□□□ 0.42
PCDHB3-201ENST00000231130 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
PCDHB3-201ENST00000231130 NUP160Q12769 1436 aa17.65■□□□□ 0.42
PCDHB3-201ENST00000231130 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
PCDHB3-201ENST00000231130 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
PCDHB3-201ENST00000231130 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
PCDHB3-201ENST00000231130 TMEM57Q8N5G2 664 aa17.65■□□□□ 0.42
PCDHB3-201ENST00000231130 UQCRHLA0A096LP55 91 aa17.64■□□□□ 0.41
PCDHB3-201ENST00000231130 UQCRHP07919 91 aa17.64■□□□□ 0.41
PCDHB3-201ENST00000231130 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
PCDHB3-201ENST00000231130 RIPK4P57078 832 aa17.64■□□□□ 0.41
PCDHB3-201ENST00000231130 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
PCDHB3-201ENST00000231130 EIF2AK4Q9P2K8 1649 aaKnown RBP17.63■□□□□ 0.41
PCDHB3-201ENST00000231130 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
PCDHB3-201ENST00000231130 ABCA8O94911 1581 aa17.63■□□□□ 0.41
PCDHB3-201ENST00000231130 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
PCDHB3-201ENST00000231130 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
PCDHB3-201ENST00000231130 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
PCDHB3-201ENST00000231130 ZSCAN30Q86W11 494 aa17.62■□□□□ 0.41
PCDHB3-201ENST00000231130 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
PCDHB3-201ENST00000231130 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
PCDHB3-201ENST00000231130 MAP7D2Q96T17 732 aa17.62■□□□□ 0.41
PCDHB3-201ENST00000231130 CD2BP2O95400 341 aaKnown RBP17.61■□□□□ 0.41
PCDHB3-201ENST00000231130 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 ARHGEF5Q12774 1597 aa17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 ABCC2Q92887 1545 aa17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
PCDHB3-201ENST00000231130 OFD1O75665 1012 aa17.59■□□□□ 0.41
PCDHB3-201ENST00000231130 SSFA2P28290 1259 aa17.59■□□□□ 0.41
PCDHB3-201ENST00000231130 DNTTIP2Q5QJE6 756 aaKnown RBP17.59■□□□□ 0.41
PCDHB3-201ENST00000231130 CABP2Q9NPB3 220 aa17.59■□□□□ 0.41
PCDHB3-201ENST00000231130 STK26Q9P289 416 aa17.59■□□□□ 0.41
PCDHB3-201ENST00000231130 APBB1O00213 710 aa17.58■□□□□ 0.41
PCDHB3-201ENST00000231130 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.41
PCDHB3-201ENST00000231130 CDC42BPBQ9Y5S2 1711 aa17.57■□□□□ 0.4
PCDHB3-201ENST00000231130 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
PCDHB3-201ENST00000231130 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
PCDHB3-201ENST00000231130 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
PCDHB3-201ENST00000231130 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
PCDHB3-201ENST00000231130 SYNMO15061 1565 aa17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 CCDC173Q0VFZ6 552 aa17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
PCDHB3-201ENST00000231130 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
PCDHB3-201ENST00000231130 FBLN1P23142 703 aa17.55■□□□□ 0.4
PCDHB3-201ENST00000231130 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 SMAP1Q8IYB5 467 aaPredicted RBP17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 MCTP1Q6DN14 999 aa17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
PCDHB3-201ENST00000231130 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
PCDHB3-201ENST00000231130 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
PCDHB3-201ENST00000231130 CBX1P83916 185 aa17.53■□□□□ 0.4
PCDHB3-201ENST00000231130 GGT6Q6P531 493 aa17.53■□□□□ 0.4
PCDHB3-201ENST00000231130 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
PCDHB3-201ENST00000231130 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.4
PCDHB3-201ENST00000231130 KANK1Q14678 1352 aa17.52■□□□□ 0.4
PCDHB3-201ENST00000231130 LAMC1P11047 1609 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms