RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RNF123Q5XPI4 1314 aa39.63■■■■□ 3.93
PABPN1-201ENST00000216727 SENP3Q9H4L4 574 aaPredicted RBP39.63■■■■□ 3.93
PABPN1-201ENST00000216727 IRX6P78412 446 aaPredicted RBP39.62■■■■□ 3.93
PABPN1-201ENST00000216727 SAFB2Q14151 953 aaKnown RBP eCLIP39.61■■■■□ 3.93
PABPN1-201ENST00000216727 POGKQ9P215 609 aa39.61■■■■□ 3.93
PABPN1-201ENST00000216727 CABP2Q9NPB3 220 aa39.6■■■■□ 3.93
PABPN1-201ENST00000216727 NRXN3Q9Y4C0 1643 aa39.58■■■■□ 3.93
PABPN1-201ENST00000216727 ATAD2Q6PL18 1390 aa39.57■■■■□ 3.93
PABPN1-201ENST00000216727 HDGFP51858 240 aaKnown RBP39.57■■■■□ 3.93
PABPN1-201ENST00000216727 CGNL1Q0VF96 1302 aa39.57■■■■□ 3.92
PABPN1-201ENST00000216727 NSD2O96028 1365 aa39.54■■■■□ 3.92
PABPN1-201ENST00000216727 ABCC11Q96J66 1382 aa39.54■■■■□ 3.92
PABPN1-201ENST00000216727 SRPK2P78362 688 aaKnown RBP39.53■■■■□ 3.92
PABPN1-201ENST00000216727 POLR3AO14802 1390 aaPredicted RBP39.53■■■■□ 3.92
PABPN1-201ENST00000216727 UBR1Q8IWV7 1749 aa39.52■■■■□ 3.92
PABPN1-201ENST00000216727 MORC1Q86VD1 984 aa39.52■■■■□ 3.92
PABPN1-201ENST00000216727 MINK1Q8N4C8 1332 aaPredicted RBP39.52■■■■□ 3.92
PABPN1-201ENST00000216727 SALL2Q9Y467 1007 aaPredicted RBP39.51■■■■□ 3.92
PABPN1-201ENST00000216727 TMEM2Q9UHN6 1383 aa39.49■■■■□ 3.91
PABPN1-201ENST00000216727 PPP4R2Q9NY27 417 aa39.48■■■■□ 3.91
PABPN1-201ENST00000216727 NLRP1Q9C000 1473 aa39.47■■■■□ 3.91
PABPN1-201ENST00000216727 A0A1W2PP64 1363 aa39.44■■■■□ 3.9
PABPN1-201ENST00000216727 METP08581 1390 aa39.41■■■■□ 3.9
PABPN1-201ENST00000216727 CDK19Q9BWU1 502 aa39.41■■■■□ 3.9
PABPN1-201ENST00000216727 TERF2IPQ9NYB0 399 aa39.4■■■■□ 3.9
PABPN1-201ENST00000216727 KNDC1Q76NI1 1749 aa39.39■■■■□ 3.9
PABPN1-201ENST00000216727 SIRT1Q96EB6 747 aa39.38■■■■□ 3.9
PABPN1-201ENST00000216727 CD163L1Q9NR16 1453 aa39.38■■■■□ 3.9
PABPN1-201ENST00000216727 TECPR2O15040 1411 aa39.38■■■■□ 3.89
PABPN1-201ENST00000216727 CDCA7LQ96GN5 454 aa39.38■■■■□ 3.89
PABPN1-201ENST00000216727 TRHP20396 242 aaPredicted RBP39.37■■■■□ 3.89
PABPN1-201ENST00000216727 WAPLQ7Z5K2 1190 aa39.36■■■■□ 3.89
PABPN1-201ENST00000216727 PLEKHH1Q9ULM0 1364 aa39.36■■■■□ 3.89
PABPN1-201ENST00000216727 C3P01024 1663 aa39.35■■■■□ 3.89
PABPN1-201ENST00000216727 ZNF521Q96K83 1311 aa39.35■■■■□ 3.89
PABPN1-201ENST00000216727 FAM135BQ49AJ0 1406 aa39.34■■■■□ 3.89
PABPN1-201ENST00000216727 RCAN3Q9UKA8 241 aa39.34■■■■□ 3.89
PABPN1-201ENST00000216727 FER1L4A9Z1Z3 1794 aa39.32■■■■□ 3.89
PABPN1-201ENST00000216727 MED14O60244 1454 aa39.32■■■■□ 3.88
PABPN1-201ENST00000216727 SHPRHQ149N8 1683 aa39.31■■■■□ 3.88
PABPN1-201ENST00000216727 NGEFQ8N5V2 710 aa39.3■■■■□ 3.88
PABPN1-201ENST00000216727 CPS1P31327 1500 aa39.3■■■■□ 3.88
PABPN1-201ENST00000216727 CEBPAP49715 358 aaPredicted RBP39.3■■■■□ 3.88
PABPN1-201ENST00000216727 TNNT2P45379 298 aaPredicted RBP39.29■■■■□ 3.88
PABPN1-201ENST00000216727 PLEKHG1Q9ULL1 1385 aa39.29■■■■□ 3.88
PABPN1-201ENST00000216727 HDGFL2Q7Z4V5 671 aaPredicted RBP39.28■■■■□ 3.88
PABPN1-201ENST00000216727 ADAMTS13Q76LX8 1427 aa39.27■■■■□ 3.88
PABPN1-201ENST00000216727 MTHFSP49914 203 aa39.26■■■■□ 3.88
PABPN1-201ENST00000216727 ANKRD26Q9UPS8 1709 aa39.25■■■■□ 3.87
PABPN1-201ENST00000216727 ATP7BP35670 1465 aa39.25■■■■□ 3.87
PABPN1-201ENST00000216727 RRP1P56182 461 aaKnown RBP39.24■■■■□ 3.87
PABPN1-201ENST00000216727 CCDC146Q8IYE0 955 aa39.24■■■■□ 3.87
PABPN1-201ENST00000216727 CFAP53Q96M91 514 aa39.24■■■■□ 3.87
PABPN1-201ENST00000216727 TSHZ2Q9NRE2 1034 aa39.24■■■■□ 3.87
PABPN1-201ENST00000216727 CABP1Q9NZU7 370 aa39.24■■■■□ 3.87
PABPN1-201ENST00000216727 SLIT1O75093 1534 aa39.22■■■■□ 3.87
PABPN1-201ENST00000216727 TXNDC2Q86VQ3 553 aa39.22■■■■□ 3.87
PABPN1-201ENST00000216727 WASLO00401 505 aaPredicted RBP39.21■■■■□ 3.87
PABPN1-201ENST00000216727 GOLGA2Q08379 1002 aa39.21■■■■□ 3.87
PABPN1-201ENST00000216727 APAF1O14727 1248 aa39.21■■■■□ 3.87
PABPN1-201ENST00000216727 LTKP29376 864 aa39.21■■■■□ 3.87
PABPN1-201ENST00000216727 ARHGAP23Q9P227 1491 aa39.2■■■■□ 3.87
PABPN1-201ENST00000216727 FYB1O15117 783 aa39.2■■■■□ 3.87
PABPN1-201ENST00000216727 DUSP27Q5VZP5 1158 aa39.16■■■■□ 3.86
PABPN1-201ENST00000216727 GGNBP2Q9H3C7 697 aa39.16■■■■□ 3.86
PABPN1-201ENST00000216727 EID1Q9Y6B2 187 aa39.16■■■■□ 3.86
PABPN1-201ENST00000216727 KIF20BQ96Q89 1820 aa39.13■■■■□ 3.85
PABPN1-201ENST00000216727 B4GALNT3Q6L9W6 998 aa39.13■■■■□ 3.85
PABPN1-201ENST00000216727 SLFN5Q08AF3 891 aa39.12■■■■□ 3.85
PABPN1-201ENST00000216727 TRMT2AQ8IZ69 625 aaKnown RBP39.11■■■■□ 3.85
PABPN1-201ENST00000216727 RUNDC1Q96C34 613 aa39.1■■■■□ 3.85
PABPN1-201ENST00000216727 CPSF1Q10570 1443 aaKnown RBP39.1■■■■□ 3.85
PABPN1-201ENST00000216727 ROBO2Q9HCK4 1378 aa39.09■■■■□ 3.85
PABPN1-201ENST00000216727 PPIP5K1Q6PFW1 1433 aa39.08■■■■□ 3.85
PABPN1-201ENST00000216727 THEMISQ8N1K5 641 aaPredicted RBP39.07■■■■□ 3.85
PABPN1-201ENST00000216727 ADGRB2O60241 1585 aa39.06■■■■□ 3.84
PABPN1-201ENST00000216727 IQSEC2Q5JU85 1478 aa39.05■■■■□ 3.84
PABPN1-201ENST00000216727 NUDT16Q96DE0 195 aaKnown RBP39.04■■■■□ 3.84
PABPN1-201ENST00000216727 CCDC61Q9Y6R9 512 aa39.03■■■■□ 3.84
PABPN1-201ENST00000216727 EDC4Q6P2E9 1401 aaKnown RBP39.03■■■■□ 3.84
PABPN1-201ENST00000216727 COL3A1P02461 1466 aaPredicted RBP39.03■■■■□ 3.84
PABPN1-201ENST00000216727 E9PSI1 815 aa39.02■■■■□ 3.84
PABPN1-201ENST00000216727 NCBP3Q53F19 620 aaKnown RBP39.02■■■■□ 3.84
PABPN1-201ENST00000216727 CDC42BPGQ6DT37 1551 aa39.02■■■■□ 3.84
PABPN1-201ENST00000216727 TBX22Q9Y458 520 aa39.01■■■■□ 3.84
PABPN1-201ENST00000216727 DIP2AQ14689 1571 aa38.99■■■■□ 3.83
PABPN1-201ENST00000216727 PTPRUQ92729 1446 aa38.98■■■■□ 3.83
PABPN1-201ENST00000216727 WWC1Q8IX03 1113 aa38.97■■■■□ 3.83
PABPN1-201ENST00000216727 PNPLA6Q8IY17 1366 aa38.97■■■■□ 3.83
PABPN1-201ENST00000216727 PLPPR3Q6T4P5 718 aa38.97■■■■□ 3.83
PABPN1-201ENST00000216727 CCDC136Q96JN2 1154 aa38.97■■■■□ 3.83
PABPN1-201ENST00000216727 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.97■■■■□ 3.83
PABPN1-201ENST00000216727 SLC26A8Q96RN1 970 aa38.96■■■■□ 3.83
PABPN1-201ENST00000216727 PHF23Q9BUL5 403 aaPredicted RBP38.96■■■■□ 3.83
PABPN1-201ENST00000216727 TCP11L2Q8N4U5 519 aa38.96■■■■□ 3.83
PABPN1-201ENST00000216727 NKTRP30414 1462 aaKnown RBP38.95■■■■□ 3.83
PABPN1-201ENST00000216727 SPINK5Q9NQ38 1064 aaPredicted RBP38.95■■■■□ 3.83
PABPN1-201ENST00000216727 MON2Q7Z3U7 1717 aa38.95■■■■□ 3.83
PABPN1-201ENST00000216727 U2AF1L5P0DN76 240 aaPredicted RBP38.94■■■■□ 3.82
PABPN1-201ENST00000216727 U2AF1Q01081 240 aaKnown RBP eCLIP38.94■■■■□ 3.827e-10■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms