RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
PPP1R3F-201ENST00000055335 SAFB2Q14151 953 aaKnown RBP eCLIP25.25■■□□□ 1.63
PPP1R3F-201ENST00000055335 CFAP53Q96M91 514 aa25.25■■□□□ 1.63
PPP1R3F-201ENST00000055335 TNPO1Q92973 898 aaKnown RBP25.25■■□□□ 1.63
PPP1R3F-201ENST00000055335 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
PPP1R3F-201ENST00000055335 GAS2L3Q86XJ1 694 aa25.24■■□□□ 1.63
PPP1R3F-201ENST00000055335 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
PPP1R3F-201ENST00000055335 NCLP19338 710 aaKnown RBP25.23■■□□□ 1.63
PPP1R3F-201ENST00000055335 TRIM27P14373 513 aa25.22■■□□□ 1.63
PPP1R3F-201ENST00000055335 TMEM132EQ6IEE7 984 aa25.22■■□□□ 1.63
PPP1R3F-201ENST00000055335 KIF3BO15066 747 aa25.21■■□□□ 1.63
PPP1R3F-201ENST00000055335 NUTM2DQ5VT03 806 aaPredicted RBP25.21■■□□□ 1.63
PPP1R3F-201ENST00000055335 NSD3Q9BZ95 1437 aa25.2■■□□□ 1.62
PPP1R3F-201ENST00000055335 ABCC2Q92887 1545 aa25.2■■□□□ 1.62
PPP1R3F-201ENST00000055335 ABCA8O94911 1581 aa25.2■■□□□ 1.62
PPP1R3F-201ENST00000055335 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.62
PPP1R3F-201ENST00000055335 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
PPP1R3F-201ENST00000055335 NOB1Q9ULX3 412 aaKnown RBP25.19■■□□□ 1.62
PPP1R3F-201ENST00000055335 SSH1Q8WYL5 1049 aa25.19■■□□□ 1.62
PPP1R3F-201ENST00000055335 ARHGEF5Q12774 1597 aa25.19■■□□□ 1.62
PPP1R3F-201ENST00000055335 ARID3AQ99856 593 aa25.19■■□□□ 1.62
PPP1R3F-201ENST00000055335 GBP4Q96PP9 640 aa25.18■■□□□ 1.62
PPP1R3F-201ENST00000055335 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
PPP1R3F-201ENST00000055335 RBM42Q9BTD8 480 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-201ENST00000055335 TMEM57Q8N5G2 664 aa25.17■■□□□ 1.62
PPP1R3F-201ENST00000055335 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
PPP1R3F-201ENST00000055335 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
PPP1R3F-201ENST00000055335 C1orf115Q9H7X2 142 aa25.16■■□□□ 1.62
PPP1R3F-201ENST00000055335 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
PPP1R3F-201ENST00000055335 RRP9O43818 475 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-201ENST00000055335 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
PPP1R3F-201ENST00000055335 AAMPQ13685 434 aa25.15■■□□□ 1.62
PPP1R3F-201ENST00000055335 ANKRD45Q5TZF3 282 aa25.15■■□□□ 1.62
PPP1R3F-201ENST00000055335 DDX19BQ9UMR2 479 aa25.15■■□□□ 1.62
PPP1R3F-201ENST00000055335 ANP32BQ92688 251 aaKnown RBP25.14■■□□□ 1.62
PPP1R3F-201ENST00000055335 POLR3AO14802 1390 aaPredicted RBP25.14■■□□□ 1.62
PPP1R3F-201ENST00000055335 SYNMO15061 1565 aa25.13■■□□□ 1.61
PPP1R3F-201ENST00000055335 CD2BP2O95400 341 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-201ENST00000055335 ATF7IPQ6VMQ6 1270 aa25.12■■□□□ 1.61
PPP1R3F-201ENST00000055335 DDX49Q9Y6V7 483 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-201ENST00000055335 LAMC1P11047 1609 aa25.11■■□□□ 1.61
PPP1R3F-201ENST00000055335 ZBTB7CA1YPR0 619 aa25.11■■□□□ 1.61
PPP1R3F-201ENST00000055335 RBM10P98175 930 aaKnown RBP25.11■■□□□ 1.61
PPP1R3F-201ENST00000055335 SSFA2P28290 1259 aa25.11■■□□□ 1.61
PPP1R3F-201ENST00000055335 ZNF692Q9BU19 519 aaPredicted RBP25.11■■□□□ 1.61
PPP1R3F-201ENST00000055335 ELL2O00472 640 aaPredicted RBP25.1■■□□□ 1.61
PPP1R3F-201ENST00000055335 KIAA1211Q6ZU35 1233 aa25.09■■□□□ 1.61
PPP1R3F-201ENST00000055335 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
PPP1R3F-201ENST00000055335 NASPP49321 788 aaPredicted RBP25.08■■□□□ 1.61
PPP1R3F-201ENST00000055335 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
PPP1R3F-201ENST00000055335 GOLGA6L22H0YM25 854 aa25.07■■□□□ 1.6
PPP1R3F-201ENST00000055335 GGNBP2Q9H3C7 697 aa25.06■■□□□ 1.6
PPP1R3F-201ENST00000055335 MSNP26038 577 aaKnown RBP25.05■■□□□ 1.6
PPP1R3F-201ENST00000055335 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
PPP1R3F-201ENST00000055335 TRAPPC8Q9Y2L5 1435 aa25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 VIRMAQ69YN4 1812 aaKnown RBP25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 RIPK4P57078 832 aa25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 HDAC1Q13547 482 aaPredicted RBP25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 CHD1LQ86WJ1 897 aa25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 CABP2Q9NPB3 220 aa25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 UNC13BO14795 1591 aa25.04■■□□□ 1.6
PPP1R3F-201ENST00000055335 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
PPP1R3F-201ENST00000055335 MADDQ8WXG6 1647 aa25.03■■□□□ 1.6
PPP1R3F-201ENST00000055335 SMC5Q8IY18 1101 aa25.03■■□□□ 1.6
PPP1R3F-201ENST00000055335 MAST1Q9Y2H9 1570 aa25.02■■□□□ 1.6
PPP1R3F-201ENST00000055335 IQGAP3Q86VI3 1631 aa25.02■■□□□ 1.6
PPP1R3F-201ENST00000055335 TMPOP42166 694 aaKnown RBP25.02■■□□□ 1.6
PPP1R3F-201ENST00000055335 MCTP1Q6DN14 999 aa25.02■■□□□ 1.6
PPP1R3F-201ENST00000055335 RTEL1-TNFRSF6BF6WH68 1400 aa25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 SCAPERQ9BY12 1400 aa25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 RAB3GAP1Q15042 981 aa25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 FOXD4L5Q5VV16 416 aaPredicted RBP25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 GAS2L2Q8NHY3 880 aa25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 FOXD4L4Q8WXT5 416 aaPredicted RBP25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
PPP1R3F-201ENST00000055335 SKOR2Q2VWA4 1001 aaPredicted RBP25■■□□□ 1.59
PPP1R3F-201ENST00000055335 STK26Q9P289 416 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 TTC37Q6PGP7 1564 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 ATP10AO60312 1499 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 KANK1Q14678 1352 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 APBB1O00213 710 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 FAM13BQ9NYF5 915 aa25■■□□□ 1.59
PPP1R3F-201ENST00000055335 CAVIN1Q6NZI2 390 aaKnown RBP25■■□□□ 1.59
PPP1R3F-201ENST00000055335 STAC3Q96MF2 364 aa24.99■■□□□ 1.59
PPP1R3F-201ENST00000055335 ZBTB40Q9NUA8 1239 aa24.99■■□□□ 1.59
PPP1R3F-201ENST00000055335 K7ELQ4 463 aaPredicted RBP24.99■■□□□ 1.59
PPP1R3F-201ENST00000055335 IPO8O15397 1037 aaKnown RBP24.99■■□□□ 1.59
PPP1R3F-201ENST00000055335 RBM25P49756 843 aaKnown RBP24.99■■□□□ 1.59
PPP1R3F-201ENST00000055335 NUCB1Q02818 461 aa24.98■■□□□ 1.59
PPP1R3F-201ENST00000055335 R3HCC1Q9Y3T6 440 aaKnown RBP24.98■■□□□ 1.59
PPP1R3F-201ENST00000055335 PREX2Q70Z35 1606 aa24.98■■□□□ 1.59
PPP1R3F-201ENST00000055335 RNF17Q9BXT8 1623 aaKnown RBP24.98■■□□□ 1.59
PPP1R3F-201ENST00000055335 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
PPP1R3F-201ENST00000055335 CCDC27Q2M243 656 aa24.97■■□□□ 1.59
PPP1R3F-201ENST00000055335 TBC1D9Q6ZT07 1266 aa24.97■■□□□ 1.59
PPP1R3F-201ENST00000055335 SNX21Q969T3 373 aa24.96■■□□□ 1.59
PPP1R3F-201ENST00000055335 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
PPP1R3F-201ENST00000055335 UGGT1Q9NYU2 1555 aa24.96■■□□□ 1.59
PPP1R3F-201ENST00000055335 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
PPP1R3F-201ENST00000055335 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms