RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Ppp4r2Q0VGB7 417 aa28.14■■■□□ 2.09
Trim27-207ENSMUST00000223065 Cnga1P29974 684 aa28.13■■■□□ 2.09
Trim27-207ENSMUST00000223065 Afap1Q80YS6 731 aa28.13■■■□□ 2.09
Trim27-207ENSMUST00000223065 CenpjQ569L8 1344 aa28.12■■■□□ 2.09
Trim27-207ENSMUST00000223065 PtprmP28828 1452 aa28.09■■■□□ 2.09
Trim27-207ENSMUST00000223065 Fam71e1A1L3C1 212 aa28.08■■■□□ 2.09
Trim27-207ENSMUST00000223065 Nlrp6Q91WS2 869 aa28.08■■■□□ 2.09
Trim27-207ENSMUST00000223065 KdrP35918 1367 aa28.07■■■□□ 2.08
Trim27-207ENSMUST00000223065 NpatQ8BMA5 1420 aa28.06■■■□□ 2.08
Trim27-207ENSMUST00000223065 Kif16bB1AVY7 1312 aa28.06■■■□□ 2.08
Trim27-207ENSMUST00000223065 MlecQ6ZQI3 291 aaKnown RBP28.06■■■□□ 2.08
Trim27-207ENSMUST00000223065 Shq1Q7TMX5 569 aa28.04■■■□□ 2.08
Trim27-207ENSMUST00000223065 CrbnQ8C7D2 445 aa28.04■■■□□ 2.08
Trim27-207ENSMUST00000223065 Eif2ak4Q9QZ05 1648 aa28.04■■■□□ 2.08
Trim27-207ENSMUST00000223065 Arhgap23Q69ZH9 1483 aa28.03■■■□□ 2.08
Trim27-207ENSMUST00000223065 Stk26Q99JT2 416 aa28.02■■■□□ 2.08
Trim27-207ENSMUST00000223065 Atp1b4Q99ME6 356 aa28.02■■■□□ 2.08
Trim27-207ENSMUST00000223065 CltcQ68FD5 1675 aaKnown RBP28.02■■■□□ 2.08
Trim27-207ENSMUST00000223065 Ttc41Q692V3 1318 aa28■■■□□ 2.07
Trim27-207ENSMUST00000223065 Kif13aQ9EQW7 1749 aa28■■■□□ 2.07
Trim27-207ENSMUST00000223065 Adamtsl3G3UXC7 1706 aa27.98■■■□□ 2.07
Trim27-207ENSMUST00000223065 Prdm10Q3UTQ7 1184 aa27.98■■■□□ 2.07
Trim27-207ENSMUST00000223065 Itsn1Q9Z0R4 1714 aa27.98■■■□□ 2.07
Trim27-207ENSMUST00000223065 Naip7Q9JIB3 1402 aa27.98■■■□□ 2.07
Trim27-207ENSMUST00000223065 Mink1Q9JM52 1308 aa27.97■■■□□ 2.07
Trim27-207ENSMUST00000223065 Kiaa1107Q80TK0 1369 aa27.95■■■□□ 2.07
Trim27-207ENSMUST00000223065 Usp19Q3UJD6 1360 aa27.95■■■□□ 2.06
Trim27-207ENSMUST00000223065 Arhgef28P97433 1693 aa27.93■■■□□ 2.06
Trim27-207ENSMUST00000223065 Kcnh8P59111 1102 aa27.93■■■□□ 2.06
Trim27-207ENSMUST00000223065 Scaf11E9PZM7 1456 aaKnown RBP27.93■■■□□ 2.06
Trim27-207ENSMUST00000223065 Q9D9H8 365 aa27.92■■■□□ 2.06
Trim27-207ENSMUST00000223065 Exosc9Q9JHI7 438 aaKnown RBP27.92■■■□□ 2.06
Trim27-207ENSMUST00000223065 RictorQ6QI06 1708 aa27.91■■■□□ 2.06
Trim27-207ENSMUST00000223065 Golga2Q921M4 999 aa27.91■■■□□ 2.06
Trim27-207ENSMUST00000223065 Cep170bQ80U49 1574 aa27.91■■■□□ 2.06
Trim27-207ENSMUST00000223065 Cald1E9QA15 768 aaKnown RBP27.9■■■□□ 2.06
Trim27-207ENSMUST00000223065 Nrxn1Q9CS84 1514 aa27.89■■■□□ 2.06
Trim27-207ENSMUST00000223065 Speer4f1Q9D5Q6 258 aa27.89■■■□□ 2.06
Trim27-207ENSMUST00000223065 IbtkQ6ZPR6 1352 aaKnown RBP27.89■■■□□ 2.06
Trim27-207ENSMUST00000223065 Supt16hQ920B9 1047 aa27.87■■■□□ 2.05
Trim27-207ENSMUST00000223065 Utp14aQ640M1 767 aaKnown RBP27.87■■■□□ 2.05
Trim27-207ENSMUST00000223065 Uspl1Q3ULM6 1089 aa27.85■■■□□ 2.05
Trim27-207ENSMUST00000223065 Ercc6l2Q9JIM3 1537 aa27.85■■■□□ 2.05
Trim27-207ENSMUST00000223065 Plekhh1Q80TI1 1356 aa27.85■■■□□ 2.05
Trim27-207ENSMUST00000223065 P2rx7Q9Z1M0 595 aa27.85■■■□□ 2.05
Trim27-207ENSMUST00000223065 Plekhg1F6S200 1446 aa27.85■■■□□ 2.05
Trim27-207ENSMUST00000223065 Map4k4P97820 1233 aaKnown RBP27.84■■■□□ 2.05
Trim27-207ENSMUST00000223065 Gsto1O09131 240 aa27.84■■■□□ 2.05
Trim27-207ENSMUST00000223065 NeflP08551 543 aa27.84■■■□□ 2.05
Trim27-207ENSMUST00000223065 Zranb1Q7M760 708 aa27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 Prkrip1Q9CWV6 186 aaKnown RBP27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 GsdmaQ9EST1 446 aa27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 Atp2b2Q9R0K7 1198 aa27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 Zc3h13E9Q784 1729 aaKnown RBP27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 Ccdc30Q8BVF4 654 aa27.82■■■□□ 2.04
Trim27-207ENSMUST00000223065 Ralbp1Q62172 648 aa27.79■■■□□ 2.04
Trim27-207ENSMUST00000223065 Cdk19Q8BWD8 501 aa27.79■■■□□ 2.04
Trim27-207ENSMUST00000223065 Rwdd1Q9CQK7 243 aa27.79■■■□□ 2.04
Trim27-207ENSMUST00000223065 TnikP83510 1323 aa27.79■■■□□ 2.04
Trim27-207ENSMUST00000223065 Slc4a3P16283 1227 aa27.78■■■□□ 2.04
Trim27-207ENSMUST00000223065 Neurod2Q62414 383 aa27.78■■■□□ 2.04
Trim27-207ENSMUST00000223065 Abca14E9Q8F8 1683 aa27.77■■■□□ 2.04
Trim27-207ENSMUST00000223065 Liat1Q810M6 228 aa27.77■■■□□ 2.04
Trim27-207ENSMUST00000223065 Mbd3Q9Z2D8 285 aaKnown RBP27.77■■■□□ 2.04
Trim27-207ENSMUST00000223065 Adgrl1Q80TR1 1466 aa27.76■■■□□ 2.03
Trim27-207ENSMUST00000223065 Tcerg1Q8CGF7 1100 aaKnown RBP27.76■■■□□ 2.03
Trim27-207ENSMUST00000223065 NktrP30415 1453 aa27.75■■■□□ 2.03
Trim27-207ENSMUST00000223065 Safb2Q80YR5 991 aaKnown RBP27.75■■■□□ 2.03
Trim27-207ENSMUST00000223065 Med14A2ABV5 1459 aaKnown RBP27.75■■■□□ 2.03
Trim27-207ENSMUST00000223065 PplQ9R269 1755 aa27.73■■■□□ 2.03
Trim27-207ENSMUST00000223065 Dip2aQ8BWT5 1523 aa27.71■■■□□ 2.03
Trim27-207ENSMUST00000223065 Brwd3A2AHJ4 1799 aa27.7■■■□□ 2.03
Trim27-207ENSMUST00000223065 FanciQ8K368 1330 aa27.7■■■□□ 2.02
Trim27-207ENSMUST00000223065 Iqsec2Q5DU25 1478 aa27.69■■■□□ 2.02
Trim27-207ENSMUST00000223065 Psme1P97371 249 aa27.68■■■□□ 2.02
Trim27-207ENSMUST00000223065 Asxl2Q8BZ32 1370 aa27.67■■■□□ 2.02
Trim27-207ENSMUST00000223065 MyclP10166 368 aa27.67■■■□□ 2.02
Trim27-207ENSMUST00000223065 Tsen2Q6P7W5 460 aa27.67■■■□□ 2.02
Trim27-207ENSMUST00000223065 Txndc2Q6P902 515 aa27.66■■■□□ 2.02
Trim27-207ENSMUST00000223065 NinlQ6ZQ12 1394 aa27.66■■■□□ 2.02
Trim27-207ENSMUST00000223065 Nwd1A6H603 1563 aa27.65■■■□□ 2.02
Trim27-207ENSMUST00000223065 U2af1Q9D883 239 aaKnown RBP27.64■■■□□ 2.02
Trim27-207ENSMUST00000223065 Ncbp3Q8BZR9 615 aaKnown RBP27.62■■■□□ 2.01
Trim27-207ENSMUST00000223065 Gemin5Q8BX17 1502 aaKnown RBP27.62■■■□□ 2.01
Trim27-207ENSMUST00000223065 Chd2E9PZM4 1827 aaKnown RBP27.61■■■□□ 2.01
Trim27-207ENSMUST00000223065 Apaf1O88879 1249 aa27.59■■■□□ 2.01
Trim27-207ENSMUST00000223065 Map3k19E9Q3S4 1311 aa27.59■■■□□ 2.01
Trim27-207ENSMUST00000223065 Gas2l2Q5SSG4 860 aa27.58■■■□□ 2.01
Trim27-207ENSMUST00000223065 Pak3Q61036 559 aa27.57■■■□□ 2
Trim27-207ENSMUST00000223065 Apbb1Q9QXJ1 710 aa27.57■■■□□ 2
Trim27-207ENSMUST00000223065 Atxn3Q9CVD2 355 aa27.57■■■□□ 2
Trim27-207ENSMUST00000223065 IghaA0A0A6YXW6 389 aa27.55■■■□□ 2
Trim27-207ENSMUST00000223065 Kdm2bQ6P1G2 1309 aa27.51■■□□□ 1.99
Trim27-207ENSMUST00000223065 Slit3Q9WVB4 1523 aa27.49■■□□□ 1.99
Trim27-207ENSMUST00000223065 Rtl5Q5DTT4 599 aa27.49■■□□□ 1.99
Trim27-207ENSMUST00000223065 Egfem1Q8C088 590 aa27.49■■□□□ 1.99
Trim27-207ENSMUST00000223065 Idi2Q8BFZ6 227 aa27.48■■□□□ 1.99
Trim27-207ENSMUST00000223065 Cps1Q8C196 1500 aa27.48■■□□□ 1.99
Trim27-207ENSMUST00000223065 Trim28Q62318 834 aa27.48■■□□□ 1.99
Trim27-207ENSMUST00000223065 Cyb5rlB1AS42 316 aa27.47■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms