RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Fkbp4P30416 458 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Ddrgk1Q80WW9 315 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Ppp2r1aQ76MZ3 589 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 TefQ9JLC6 301 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Atl3Q91YH5 541 aa21.77■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Cyp46a1Q9WVK8 500 aa21.77■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Gm21698A0A087WQP8 267 aa21.77■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Gm21671G3UY31 267 aa21.77■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Nek4Q9Z1J2 792 aa21.77■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Klf15Q9EPW2 415 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Fmnl2A2APV2 1086 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Abl1P00520 1123 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Gprasp1Q5U4C1 1347 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Mre11Q61216 706 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 UvssaQ9D479 717 aa21.76■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Me1P06801 572 aa21.75■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Arid4aF8VPQ2 1261 aaKnown RBP21.75■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Ipo7Q9EPL8 1038 aaKnown RBP21.75■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Rabep1O35551 862 aa21.75■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Cavin4A2AMM0 362 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Drc7Q6V3W6 876 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Gm7298A0A0N4SVU1 1476 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 VgfQ0VGU4 617 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Cetn4Q8K4K1 168 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Naip1Q9QWK5 1403 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 A0A1L1SQF0 893 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Mad1l1Q9WTX8 717 aaKnown RBP21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Nol12Q8BG17 217 aa21.74■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Cdk19Q8BWD8 501 aa21.73■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Dennd6aQ8BH65 605 aa21.72■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Cc2d2aQ8CFW7 1633 aa21.72■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Hnrnpul1Q8VDM6 859 aaKnown RBP21.71■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Cabp2Q9JLK4 216 aa21.71■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 PogkQ80TC5 607 aa21.71■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Plekhh1Q80TI1 1356 aa21.7■■□□□ 1.07
Smarcc1-207ENSMUST00000199896 Ccdc171E9Q1U1 1324 aa21.7■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Kif4P33174 1231 aa21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 March6Q6ZQ89 909 aa21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gripap1Q8VD04 806 aa21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Usp48Q3V0C5 1052 aa21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Rab3gap2Q8BMG7 1366 aa21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Rbm28Q8CGC6 750 aaKnown RBP21.69■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gtf2f1Q3THK3 508 aaKnown RBP21.68■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Myom3A2ABU4 1439 aa21.68■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Ush1cQ9ES64 910 aa21.68■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 4933402E13RikQ9D4D2 429 aa21.68■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 SetQ9EQU5 289 aaKnown RBP21.68■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Speer4bQ9D9F7 267 aa21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Agtpbp1Q641K1 1218 aa21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gpatch3Q8BIY1 525 aa21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gm14025A2AP89 1413 aa21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 HnrnpmQ9D0E1 729 aaKnown RBP21.67■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Trim29Q8R2Q0 587 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Dhx9O70133 1380 aaKnown RBP21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Fam193aQ8CGI1 1231 aaKnown RBP21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Cfap99A0A140LIX9 648 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 SkilQ60665 675 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 PsapQ61207 557 aaKnown RBP21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Cchcr1Q8K2I2 770 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Stard3nlQ9DCI3 235 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gimap6Q8K349 305 aa21.66■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Stk11ipQ3TAA7 1072 aa21.65■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Hook1Q8BIL5 728 aa21.65■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Prkrip1Q9CWV6 186 aaKnown RBP21.65■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Ccdc183A2AJB1 534 aa21.65■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Gm21680A0A0G2JGR8 267 aa21.64■■□□□ 1.06
Smarcc1-207ENSMUST00000199896 Samd1D3YXK1 519 aa21.64■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Zkscan2G3X952 960 aa21.64■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Psma5Q9Z2U1 241 aaKnown RBP21.64■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Nol8Q3UHX0 1147 aaKnown RBP21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ccdc141E9Q8Q6 1531 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gm21663A0A0G2JE01 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gm7361D3Z6R1 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 5031410I06RikE9Q4E0 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gm1979E9QAN3 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gm5862K7N5V5 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gm10220K7N660 267 aa21.63■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Gnai2P08752 355 aaKnown RBP21.62■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 NrkQ9R0G8 1455 aa21.62■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Zfp444Q3TDV8 331 aaKnown RBP21.62■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ncbp3Q8BZR9 615 aaKnown RBP21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Paf1Q8K2T8 535 aa21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ftsj3Q9DBE9 838 aaKnown RBP21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Slc4a2P13808 1237 aaKnown RBP21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Mcm2P97310 904 aa21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Kcnh8P59111 1102 aa21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 PogzQ8BZH4 1409 aaKnown RBP21.61■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 TkfcQ8VC30 578 aa21.6■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ints3Q7TPD0 1041 aaKnown RBP21.6■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Washc4Q3UMB9 1173 aa21.6■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Fnbp4Q6ZQ03 1031 aa21.6■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Sugp2Q8CH09 1067 aa21.6■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Dusp27Q148W8 1138 aa21.59■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ggnbp2Q5SV77 696 aa21.59■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Nphp1Q9QY53 687 aa21.59■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Arhgef5E9Q7D5 1581 aa21.59■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 CadpsQ80TJ1 1355 aa21.59■■□□□ 1.05
Smarcc1-207ENSMUST00000199896 Ttll13A4Q9F6 804 aa21.58■■□□□ 1.04
Smarcc1-207ENSMUST00000199896 Plekhd1B2RPU2 505 aa21.58■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms