RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Nlrp6Q91WS2 869 aa36.82■■■■□ 3.48
Ldb1-208ENSMUST00000185355 CenpjQ569L8 1344 aa36.81■■■■□ 3.48
Ldb1-208ENSMUST00000185355 Prrc2bQ7TPM1 1486 aaKnown RBP36.8■■■■□ 3.48
Ldb1-208ENSMUST00000185355 Supt16hQ920B9 1047 aa36.8■■■■□ 3.48
Ldb1-208ENSMUST00000185355 Ppp1r18Q8BQ30 594 aa36.79■■■■□ 3.48
Ldb1-208ENSMUST00000185355 Arhgap23Q69ZH9 1483 aa36.76■■■■□ 3.48
Ldb1-208ENSMUST00000185355 CrbnQ8C7D2 445 aa36.75■■■■□ 3.47
Ldb1-208ENSMUST00000185355 PtprmP28828 1452 aa36.72■■■■□ 3.47
Ldb1-208ENSMUST00000185355 Cnga1P29974 684 aa36.71■■■■□ 3.47
Ldb1-208ENSMUST00000185355 Usp19Q3UJD6 1360 aa36.71■■■■□ 3.47
Ldb1-208ENSMUST00000185355 NeflP08551 543 aa36.7■■■■□ 3.47
Ldb1-208ENSMUST00000185355 Kif13aQ9EQW7 1749 aa36.68■■■■□ 3.46
Ldb1-208ENSMUST00000185355 Plekhh1Q80TI1 1356 aa36.67■■■■□ 3.46
Ldb1-208ENSMUST00000185355 TnikP83510 1323 aa36.66■■■■□ 3.46
Ldb1-208ENSMUST00000185355 CltcQ68FD5 1675 aaKnown RBP36.66■■■■□ 3.46
Ldb1-208ENSMUST00000185355 Prkrip1Q9CWV6 186 aaKnown RBP36.65■■■■□ 3.46
Ldb1-208ENSMUST00000185355 Kiaa1107Q80TK0 1369 aa36.65■■■■□ 3.46
Ldb1-208ENSMUST00000185355 Kcnh8P59111 1102 aa36.64■■■■□ 3.46
Ldb1-208ENSMUST00000185355 Itsn1Q9Z0R4 1714 aa36.63■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Arhgef28P97433 1693 aa36.63■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Scaf11E9PZM7 1456 aaKnown RBP36.63■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Nrxn1Q9CS84 1514 aa36.62■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Mbd3Q9Z2D8 285 aaKnown RBP36.62■■■■□ 3.45
Ldb1-208ENSMUST00000185355 NpatQ8BMA5 1420 aa36.61■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Tcerg1Q8CGF7 1100 aaKnown RBP36.6■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Golga2Q921M4 999 aa36.6■■■■□ 3.45
Ldb1-208ENSMUST00000185355 IbtkQ6ZPR6 1352 aaKnown RBP36.58■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Shq1Q7TMX5 569 aa36.57■■■■□ 3.45
Ldb1-208ENSMUST00000185355 Liat1Q810M6 228 aa36.57■■■■□ 3.45
Ldb1-208ENSMUST00000185355 RictorQ6QI06 1708 aa36.57■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Afap1Q80YS6 731 aa36.57■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Speer4f1Q9D5Q6 258 aa36.57■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Naip7Q9JIB3 1402 aa36.55■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Rtl5Q5DTT4 599 aa36.55■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Atp1b4Q99ME6 356 aa36.54■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Map4k4P97820 1233 aaKnown RBP36.53■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Stk26Q99JT2 416 aa36.53■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Adgrl1Q80TR1 1466 aa36.53■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Cep170bQ80U49 1574 aa36.53■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Zc3h13E9Q784 1729 aaKnown RBP36.51■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Cald1E9QA15 768 aaKnown RBP36.51■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Rwdd1Q9CQK7 243 aa36.51■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Exosc9Q9JHI7 438 aaKnown RBP36.51■■■■□ 3.44
Ldb1-208ENSMUST00000185355 Uspl1Q3ULM6 1089 aa36.5■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Prdm10Q3UTQ7 1184 aa36.5■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Ccdc30Q8BVF4 654 aa36.5■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Plekhg1F6S200 1446 aa36.5■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Ralbp1Q62172 648 aa36.5■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Med14A2ABV5 1459 aaKnown RBP36.49■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Slc4a3P16283 1227 aa36.49■■■■□ 3.43
Ldb1-208ENSMUST00000185355 GsdmaQ9EST1 446 aa36.46■■■■□ 3.43
Ldb1-208ENSMUST00000185355 Iqsec2Q5DU25 1478 aa36.44■■■■□ 3.42
Ldb1-208ENSMUST00000185355 Abca14E9Q8F8 1683 aa36.44■■■■□ 3.42
Ldb1-208ENSMUST00000185355 PplQ9R269 1755 aa36.4■■■■□ 3.42
Ldb1-208ENSMUST00000185355 Q9D9H8 365 aa36.39■■■■□ 3.42
Ldb1-208ENSMUST00000185355 P2rx7Q9Z1M0 595 aa36.39■■■■□ 3.42
Ldb1-208ENSMUST00000185355 Gsto1O09131 240 aa36.38■■■■□ 3.41
Ldb1-208ENSMUST00000185355 Neurod2Q62414 383 aa36.38■■■■□ 3.41
Ldb1-208ENSMUST00000185355 Utp14aQ640M1 767 aaKnown RBP36.36■■■■□ 3.41
Ldb1-208ENSMUST00000185355 Ercc6l2Q9JIM3 1537 aa36.34■■■■□ 3.41
Ldb1-208ENSMUST00000185355 NktrP30415 1453 aa36.34■■■■□ 3.41
Ldb1-208ENSMUST00000185355 Dip2aQ8BWT5 1523 aa36.33■■■■□ 3.41
Ldb1-208ENSMUST00000185355 Atp2b2Q9R0K7 1198 aa36.31■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Pak3Q61036 559 aa36.3■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Nwd1A6H603 1563 aa36.29■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Ncbp3Q8BZR9 615 aaKnown RBP36.29■■■■□ 3.4
Ldb1-208ENSMUST00000185355 FanciQ8K368 1330 aa36.28■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Cdk19Q8BWD8 501 aa36.27■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Zmym3Q9JLM4 1370 aa36.26■■■■□ 3.4
Ldb1-208ENSMUST00000185355 Zranb1Q7M760 708 aa36.23■■■■□ 3.39
Ldb1-208ENSMUST00000185355 Egfem1Q8C088 590 aa36.23■■■■□ 3.39
Ldb1-208ENSMUST00000185355 Tsen2Q6P7W5 460 aa36.22■■■■□ 3.39
Ldb1-208ENSMUST00000185355 Kdm2bQ6P1G2 1309 aa36.22■■■■□ 3.39
Ldb1-208ENSMUST00000185355 Gemin5Q8BX17 1502 aaKnown RBP36.19■■■■□ 3.38
Ldb1-208ENSMUST00000185355 Dnajc5P60904 198 aa36.19■■■■□ 3.38
Ldb1-208ENSMUST00000185355 NinlQ6ZQ12 1394 aa36.19■■■■□ 3.38
Ldb1-208ENSMUST00000185355 U2af1Q9D883 239 aaKnown RBP36.19■■■■□ 3.38
Ldb1-208ENSMUST00000185355 Apbb1Q9QXJ1 710 aa36.13■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Chd2E9PZM4 1827 aaKnown RBP36.12■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Znf541Q0GGX2 1363 aa36.11■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Usp32F8VPZ3 1604 aa36.1■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Adamtsl3G3UXC7 1706 aa36.09■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Gas2l2Q5SSG4 860 aa36.09■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Atxn3Q9CVD2 355 aa36.07■■■■□ 3.37
Ldb1-208ENSMUST00000185355 Apaf1O88879 1249 aa36.07■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Ciz1Q8VEH2 845 aa36.07■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Ttll13A4Q9F6 804 aa36.06■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Psme1P97371 249 aa36.06■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Map3k19E9Q3S4 1311 aa36.04■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Cps1Q8C196 1500 aa36.04■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Fam135bQ9DAI6 1403 aa36.02■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Asxl2Q8BZ32 1370 aa36.02■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Txndc2Q6P902 515 aa36.02■■■■□ 3.36
Ldb1-208ENSMUST00000185355 Kif1aP33173 1695 aa36.02■■■■□ 3.36
Ldb1-208ENSMUST00000185355 AampJ3QN89 436 aa36■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Trim58Q5NCC9 485 aa36■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Ipo9Q91YE6 1041 aa36■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Slit3Q9WVB4 1523 aa36■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Mapk8ip3Q9ESN9 1337 aa35.99■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Uhrf1bp1B2KF50 1429 aa35.98■■■■□ 3.35
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms