RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 SafbD3YXK2 937 aaKnown RBP9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Usp33Q8R5K2 909 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Fam170aQ66LM6 333 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Usp5P56399 858 aaKnown RBP9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Ccar2Q8VDP4 922 aaKnown RBP9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 TbcaP48428 108 aaKnown RBP9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Hmox1P14901 289 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Wdhd1P59328 1117 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Rrp12Q6P5B0 1295 aaKnown RBP9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Mtus2Q3UHD3 1353 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Trak1Q6PD31 939 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Plekhg2Q6KAU7 1340 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Tbc1d8Q9Z1A9 1134 aa9.58□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Fam71e1A1L3C1 212 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 ItpripQ3TNL8 555 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Chmp6P0C0A3 200 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Golga2Q921M4 999 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Calcoco2A2A6M5 331 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Map3k13Q1HKZ5 959 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Armc3A2AU72 881 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 GnpatP98192 678 aa9.57□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Setd5Q5XJV7 1441 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 MpripP97434 1024 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Vti1aO89116 217 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Map4k4P97820 1233 aaKnown RBP9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Taf3Q5HZG4 932 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Kcng1A2BDX4 514 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 TatQ8QZR1 454 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Paip2Q9D6V8 124 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Tmx1Q8VBT0 278 aa9.56□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 NgdnQ9DB96 315 aaKnown RBP9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Tsen2Q6P7W5 460 aa9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Bicd2Q921C5 820 aa9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Sf3a1Q8K4Z5 791 aaKnown RBP9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Prpf38aQ4FK66 312 aaKnown RBP9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Epb41l2O70318 988 aaKnown RBP9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Arl1P61211 181 aa9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Fndc3aQ8BX90 1198 aa9.55□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Cald1E9QA15 768 aaKnown RBP9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Aimp1P31230 310 aaKnown RBP9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Sestd1Q80UK0 696 aa9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Ercc3P49135 783 aa9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Eno4Q8C042 619 aa9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Ipo9Q91YE6 1041 aa9.54□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Aebp2Q9Z248 504 aaKnown RBP9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Bank1Q80VH0 783 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Rpap1Q80TE0 1409 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Arhgef18Q6P9R4 1021 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Ccdc60Q8C4J0 545 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Rwdd1Q9CQK7 243 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Q9D9H8 365 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Kifc2O08672 792 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Rfx1P48377 963 aa9.53□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Ltv1Q6NSQ7 470 aaKnown RBP9.52□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Vps37dQ810I0 261 aa9.52□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Stac3Q8BZ71 360 aa9.52□□□□□ -0.88
Rc3h1-202ENSMUST00000161609 Hspa5P20029 655 aaKnown RBP9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Tnnt2P50752 301 aa9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Taf12Q8VE65 161 aa9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Mroh7A2AVR2 1279 aa9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 BbxQ8VBW5 907 aa9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Nsfl1cQ9CZ44 370 aaKnown RBP9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 KarsQ99MN1 595 aaKnown RBP9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 HmmrQ00547 794 aaKnown RBP9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Pde3aQ9Z0X4 1141 aa9.52□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Cfap69Q8BH53 942 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Gjc1P28229 396 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Smarcad1Q04692 1021 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Slc13a4Q8BZ82 625 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 WdpcpQ8C456 722 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Polr3dQ91WD1 398 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 BlvraQ9CY64 295 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Tpm1P58771 284 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ttc5Q99LG4 440 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Zbtb21E9Q444 1094 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ppfia3P60469 1194 aa9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Pdcd6ipQ9WU78 869 aaKnown RBP9.51□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ice2Q3UZ18 988 aaKnown RBP9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Sp4Q62445 782 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Capn12Q9ER56 720 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 UvssaQ9D479 717 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Usp16Q99LG0 825 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Terf1P70371 421 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Dact3Q0PHV7 610 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Becn1O88597 448 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Snx25Q3ZT31 840 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Cetn4Q8K4K1 168 aa9.5□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 MsnP26041 577 aaKnown RBP9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 NexnQ7TPW1 607 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Znf18Q810A1 556 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Hdac6Q9Z2V5 1149 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Drc3Q9D5E4 523 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Foxd4Q60688 444 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Tax1bp1Q3UKC1 814 aaKnown RBP9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Samm50Q8BGH2 469 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Tnni2P13412 182 aa9.49□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Igflr1Q3U4N7 345 aa9.48□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Gimap5Q8BWF2 308 aa9.48□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Spata17Q9D552 379 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms