Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gm25239-201ENSMUST00000174915 86 ntBASIC45.6■■■■■ 4.89
Usp33Q8R5K2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.36■■■■■ 4.37
Usp33Q8R5K2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
Usp33Q8R5K2 Gm24109-201ENSMUST00000175489 103 ntBASIC39.71■■■■□ 3.95
Usp33Q8R5K2 Gm15042-201ENSMUST00000120212 883 ntBASIC39.5■■■■□ 3.91
Usp33Q8R5K2 Gm15045-201ENSMUST00000117359 883 ntBASIC38.54■■■■□ 3.76
Usp33Q8R5K2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Usp33Q8R5K2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
Usp33Q8R5K2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Usp33Q8R5K2 Gm23366-201ENSMUST00000175022 89 ntBASIC38.04■■■■□ 3.68
Usp33Q8R5K2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Usp33Q8R5K2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Usp33Q8R5K2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.19■■■■□ 3.54
Usp33Q8R5K2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Usp33Q8R5K2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.83■■■■□ 3.49
Usp33Q8R5K2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Usp33Q8R5K2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.81■■■■□ 3.48
Usp33Q8R5K2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Usp33Q8R5K2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.53■■■■□ 3.44
Usp33Q8R5K2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Usp33Q8R5K2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Usp33Q8R5K2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.13■■■■□ 3.37
Usp33Q8R5K2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Usp33Q8R5K2 Gm25238-201ENSMUST00000174914 89 ntBASIC36.1■■■■□ 3.37
Usp33Q8R5K2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.07■■■■□ 3.37
Usp33Q8R5K2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Usp33Q8R5K2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Usp33Q8R5K2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.73■■■■□ 3.31
Usp33Q8R5K2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Usp33Q8R5K2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Usp33Q8R5K2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.45■■■■□ 3.27
Usp33Q8R5K2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.36■■■■□ 3.25
Usp33Q8R5K2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.32■■■■□ 3.24
Usp33Q8R5K2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Usp33Q8R5K2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.04■■■■□ 3.2
Usp33Q8R5K2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.97■■■■□ 3.19
Usp33Q8R5K2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
Usp33Q8R5K2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Usp33Q8R5K2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.84■■■■□ 3.17
Usp33Q8R5K2 Gm25262-201ENSMUST00000174934 133 ntBASIC34.78■■■■□ 3.16
Usp33Q8R5K2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Usp33Q8R5K2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Usp33Q8R5K2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.61■■■■□ 3.13
Usp33Q8R5K2 Gm27325-201ENSMUST00000175467 74 ntBASIC34.53■■■■□ 3.12
Usp33Q8R5K2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
Usp33Q8R5K2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Usp33Q8R5K2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.28■■■■□ 3.08
Usp33Q8R5K2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Usp33Q8R5K2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.2■■■■□ 3.07
Usp33Q8R5K2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.18■■■■□ 3.06
Usp33Q8R5K2 Rab21-202ENSMUST00000218831 843 ntBASIC34.14■■■■□ 3.06
Usp33Q8R5K2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.1■■■■□ 3.05
Usp33Q8R5K2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.06■■■■□ 3.04
Usp33Q8R5K2 Gm26115-201ENSMUST00000175605 87 ntBASIC34.06■■■■□ 3.04
Usp33Q8R5K2 Psd-208ENSMUST00000224556 2034 ntBASIC34.02■■■■□ 3.04
Usp33Q8R5K2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Usp33Q8R5K2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Usp33Q8R5K2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.94■■■■□ 3.02
Usp33Q8R5K2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
Usp33Q8R5K2 Gm8109-201ENSMUST00000194076 746 ntBASIC33.85■■■■□ 3.01
Usp33Q8R5K2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.84■■■■□ 3.01
Usp33Q8R5K2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Usp33Q8R5K2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.8■■■■□ 3
Usp33Q8R5K2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.79■■■■□ 3
Usp33Q8R5K2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.69■■■□□ 2.98
Usp33Q8R5K2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
Usp33Q8R5K2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.61■■■□□ 2.97
Usp33Q8R5K2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.48■■■□□ 2.95
Usp33Q8R5K2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Usp33Q8R5K2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Usp33Q8R5K2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
Usp33Q8R5K2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.42■■■□□ 2.94
Usp33Q8R5K2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Usp33Q8R5K2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.39■■■□□ 2.94
Usp33Q8R5K2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Usp33Q8R5K2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Usp33Q8R5K2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Usp33Q8R5K2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Usp33Q8R5K2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.26■■■□□ 2.91
Usp33Q8R5K2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Usp33Q8R5K2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Usp33Q8R5K2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Usp33Q8R5K2 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.97■■■□□ 2.87
Usp33Q8R5K2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Usp33Q8R5K2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
Usp33Q8R5K2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.95■■■□□ 2.87
Usp33Q8R5K2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.93■■■□□ 2.86
Usp33Q8R5K2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Usp33Q8R5K2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.9■■■□□ 2.86
Usp33Q8R5K2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Usp33Q8R5K2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Usp33Q8R5K2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
Usp33Q8R5K2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.82■■■□□ 2.84
Usp33Q8R5K2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Usp33Q8R5K2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
Usp33Q8R5K2 Gm27322-201ENSMUST00000184007 104 ntBASIC32.73■■■□□ 2.83
Usp33Q8R5K2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Usp33Q8R5K2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Usp33Q8R5K2 Gm24804-201ENSMUST00000174982 85 ntBASIC32.68■■■□□ 2.82
Usp33Q8R5K2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.67■■■□□ 2.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms