RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 IqubQ8CDK3 788 aa23.01■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Cpsf1Q9EPU4 1441 aaKnown RBP23.01■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Zbtb4Q5F293 982 aa23.01■■□□□ 1.27
Tpm1-215ENSMUST00000113705 RalgapbQ8BQZ4 1484 aa23■■□□□ 1.27
Tpm1-215ENSMUST00000113705 D430041D05RikF6ZGR6 1678 aa23■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Plekhg1F6S200 1446 aa23■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Abca14E9Q8F8 1683 aa22.98■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Mink1Q9JM52 1308 aa22.98■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Pik3c2aQ61194 1686 aa22.97■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Ttll13A4Q9F6 804 aa22.96■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Atp2b2Q9R0K7 1198 aa22.96■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Sipa1l2Q80TE4 1722 aa22.93■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Dapk1Q80YE7 1442 aa22.93■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Ppargc1bQ8VHJ7 1014 aa22.92■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Nphp4P59240 1425 aa22.91■■□□□ 1.26
Tpm1-215ENSMUST00000113705 C5P06684 1680 aa22.91■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Sox12Q04890 314 aa22.9■■□□□ 1.26
Tpm1-215ENSMUST00000113705 TonslQ6NZL6 1363 aa22.9■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Gtf2e1Q9D0D5 440 aa22.89■■□□□ 1.26
Tpm1-215ENSMUST00000113705 Rundc1Q0VDN7 615 aa22.89■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Rpgrip1Q9EPQ2 1331 aa22.87■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Als2Q920R0 1651 aa22.87■■□□□ 1.25
Tpm1-215ENSMUST00000113705 GnpatP98192 678 aa22.86■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Ddx17Q501J6 650 aaKnown RBP22.86■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Srcin1Q9QWI6 1250 aa22.86■■□□□ 1.25
Tpm1-215ENSMUST00000113705 KdrP35918 1367 aa22.85■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Mapk8ip2Q9ERE9 830 aa22.85■■□□□ 1.25
Tpm1-215ENSMUST00000113705 NefmP08553 848 aa22.84■■□□□ 1.25
Tpm1-215ENSMUST00000113705 Card11Q8CIS0 1159 aa22.84■■□□□ 1.25
Tpm1-215ENSMUST00000113705 NgefQ8CHT1 710 aa22.83■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Kif24Q6NWW5 1356 aa22.83■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Qtrt2B8ZXI1 415 aa22.82■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Idi1P58044 227 aa22.82■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Znf316Q6PGE4 1016 aa22.82■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Farp2Q91VS8 1065 aa22.81■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Slc5a4bQ91ZP4 660 aa22.81■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Wnk3Q80XP9 1757 aa22.81■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Stard8Q8K031 1019 aa22.8■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Nyap1Q6PFX7 833 aa22.79■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Gm16486A0A1D5RMD1 1434 aa22.79■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Abcc10Q8R4P9 1501 aa22.79■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Kcna6Q61923 529 aa22.78■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Cdk19Q8BWD8 501 aa22.78■■□□□ 1.24
Tpm1-215ENSMUST00000113705 CenpjQ569L8 1344 aa22.78■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Rock2P70336 1388 aa22.78■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Zranb1Q7M760 708 aa22.77■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Acin1Q9JIX8 1338 aaKnown RBP22.77■■□□□ 1.24
Tpm1-215ENSMUST00000113705 Tmem2Q5FWI3 1383 aa22.76■■□□□ 1.23
Tpm1-215ENSMUST00000113705 DccP70211 1447 aa22.75■■□□□ 1.23
Tpm1-215ENSMUST00000113705 Zfp142G5E869 1843 aa22.74■■□□□ 1.23
Tpm1-215ENSMUST00000113705 NktrP30415 1453 aa22.74■■□□□ 1.23
Tpm1-215ENSMUST00000113705 Ap3b2Q9JME5 1082 aa22.73■■□□□ 1.23
Tpm1-215ENSMUST00000113705 Kif1aP33173 1695 aa22.7■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Tnrc6bQ8BKI2 1810 aaKnown RBP22.69■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Znf526Q8BI66 675 aa22.69■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Ybx3Q9JKB3 361 aaKnown RBP22.69■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Camta1A2A891 1682 aa22.69■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Pola1P33609 1465 aa22.69■■□□□ 1.22
Tpm1-215ENSMUST00000113705 N4bp2F8VQG7 1678 aaKnown RBP22.68■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Gsto1O09131 240 aa22.68■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Phf23Q8BSN5 401 aa22.67■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Exosc9Q9JHI7 438 aaKnown RBP22.67■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Ggt6Q6PDE7 497 aa22.66■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Bcl2l12Q9D3J3 255 aa22.65■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Sirt1Q923E4 737 aa22.64■■□□□ 1.22
Tpm1-215ENSMUST00000113705 Sema6bO54951 886 aa22.63■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Cnga1P29974 684 aa22.63■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Wdr17E9Q271 1322 aa22.62■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Mon2Q80TL7 1715 aa22.62■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Smim5Q8BT42 78 aa22.62■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Nhsl1Q8CAF4 1587 aa22.61■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Cntnap1O54991 1385 aa22.6■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Fbln2P37889 1221 aa22.6■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Slc35g1Q8BY79 368 aa22.6■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Cypt2Q6P924 180 aa22.59■■□□□ 1.21
Tpm1-215ENSMUST00000113705 InsrP15208 1372 aa22.59■■□□□ 1.21
Tpm1-215ENSMUST00000113705 FanciQ8K368 1330 aa22.58■■□□□ 1.21
Tpm1-215ENSMUST00000113705 Acsbg1Q99PU5 721 aa22.58■■□□□ 1.2
Tpm1-215ENSMUST00000113705 PtpruB1AUH1 1446 aa22.57■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Map3k19E9Q3S4 1311 aa22.57■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Marf1Q8BJ34 1730 aaKnown RBP22.56■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Fyb1O35601 819 aa22.55■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Idi2Q8BFZ6 227 aa22.55■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Atp7bQ64446 1462 aa22.55■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Slit2Q9R1B9 1521 aa22.55■■□□□ 1.2
Tpm1-215ENSMUST00000113705 GapdhsQ64467 440 aa22.54■■□□□ 1.2
Tpm1-215ENSMUST00000113705 MypopQ8R4U1 393 aa22.54■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Slc24a1Q91WD8 1130 aa22.54■■□□□ 1.2
Tpm1-215ENSMUST00000113705 PtprvP70289 1705 aa22.53■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Lrp6O88572 1613 aa22.53■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Nrxn1Q9CS84 1514 aa22.53■■□□□ 1.2
Tpm1-215ENSMUST00000113705 Sin3aQ60520 1274 aaKnown RBP22.53■■□□□ 1.2
Tpm1-215ENSMUST00000113705 CatipB9EKE5 520 aa22.51■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Dixdc1Q80Y83 711 aa22.51■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Atp10bB1AWN4 1474 aa22.5■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Adgrl1Q80TR1 1466 aa22.5■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Fnbp4Q6ZQ03 1031 aa22.5■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Ddx54Q8K4L0 874 aaKnown RBP22.5■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Fam135bQ9DAI6 1403 aa22.49■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Las1lA2BE28 776 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms