RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Dnttip2Q8R2M2 758 aaKnown RBP11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Ythdc1E9Q5K9 736 aaKnown RBP11.96□□□□□ -0.49
Trim9-201ENSMUST00000110520 DroshaQ5HZJ0 1373 aaKnown RBP11.96□□□□□ -0.5
Trim9-201ENSMUST00000110520 Trim44Q9QXA7 346 aa11.96□□□□□ -0.5
Trim9-201ENSMUST00000110520 PtmaP26350 111 aa11.95□□□□□ -0.5
Trim9-201ENSMUST00000110520 Lrrc9Q8CDN9 1456 aa11.95□□□□□ -0.5
Trim9-201ENSMUST00000110520 Slc12a5Q91V14 1138 aa11.95□□□□□ -0.5
Trim9-201ENSMUST00000110520 Tnpo1Q8BFY9 898 aaKnown RBP11.95□□□□□ -0.5
Trim9-201ENSMUST00000110520 Asxl2Q8BZ32 1370 aa11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Uspl1Q3ULM6 1089 aa11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Ggnbp2Q5SV77 696 aa11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Maco1Q7TQE6 664 aaKnown RBP11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Egfem1Q8C088 590 aa11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Slc52a2Q9D8F3 450 aa11.94□□□□□ -0.5
Trim9-201ENSMUST00000110520 Aplp1Q03157 653 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 FanciQ8K368 1330 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 OvosQ3UU35 1456 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Znf608Q56A10 1511 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Rsph4aQ8BYM7 716 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Gnai1B2RSH2 354 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Bcl2l13P59017 434 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Cog6Q8R3I3 657 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Gnai3Q9DC51 354 aa11.93□□□□□ -0.5
Trim9-201ENSMUST00000110520 Mre11Q61216 706 aa11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Eif4g2Q62448 906 aaKnown RBP11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Smc5Q8CG46 1101 aaKnown RBP11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Slc4a10Q5DTL9 1118 aa11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Nek4Q9Z1J2 792 aa11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Zmym4A2A791 1549 aaKnown RBP11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Abcc2Q8VI47 1543 aa11.92□□□□□ -0.5
Trim9-201ENSMUST00000110520 Lrriq1Q0P5X1 1673 aa11.91□□□□□ -0.5
Trim9-201ENSMUST00000110520 Ppp2r3aB2RXC8 1150 aa11.91□□□□□ -0.5
Trim9-201ENSMUST00000110520 PrkcshO08795 521 aa11.91□□□□□ -0.5
Trim9-201ENSMUST00000110520 Adgrl2Q8JZZ7 1487 aa11.9□□□□□ -0.5
Trim9-201ENSMUST00000110520 Kiaa1551Q5DTW7 1521 aa11.9□□□□□ -0.5
Trim9-201ENSMUST00000110520 Kif14L0N7N1 1674 aaKnown RBP11.9□□□□□ -0.5
Trim9-201ENSMUST00000110520 Edc4Q3UJB9 1406 aaKnown RBP11.9□□□□□ -0.5
Trim9-201ENSMUST00000110520 Abcc6Q9R1S7 1498 aa11.89□□□□□ -0.51
Trim9-201ENSMUST00000110520 Brpf1B2RRD7 1212 aa11.89□□□□□ -0.51
Trim9-201ENSMUST00000110520 Cdc37l1Q9CZP7 335 aa11.89□□□□□ -0.51
Trim9-201ENSMUST00000110520 Rusc2Q80U22 1514 aa11.89□□□□□ -0.51
Trim9-201ENSMUST00000110520 SkilQ60665 675 aa11.89□□□□□ -0.51
Trim9-201ENSMUST00000110520 SlkO54988 1233 aa11.88□□□□□ -0.51
Trim9-201ENSMUST00000110520 Map4k4P97820 1233 aaKnown RBP11.88□□□□□ -0.51
Trim9-201ENSMUST00000110520 Atl3Q91YH5 541 aa11.88□□□□□ -0.51
Trim9-201ENSMUST00000110520 Klhdc4Q921I2 584 aa11.88□□□□□ -0.51
Trim9-201ENSMUST00000110520 Q9D2X8 372 aa11.88□□□□□ -0.51
Trim9-201ENSMUST00000110520 AatkQ80YE4 1365 aa11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Kif18aQ91WD7 886 aa11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Pprc1Q6NZN1 1644 aa11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Supt6hQ62383 1726 aaKnown RBP11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Duxf3A0A0N4SV92 674 aa11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Rabep1O35551 862 aa11.87□□□□□ -0.51
Trim9-201ENSMUST00000110520 Ppp1r3fQ9JIG4 799 aa11.86□□□□□ -0.51
Trim9-201ENSMUST00000110520 Zfp777B9EKF4 885 aa11.86□□□□□ -0.51
Trim9-201ENSMUST00000110520 Tarbp1E9Q368 1579 aa11.86□□□□□ -0.51
Trim9-201ENSMUST00000110520 NinlQ6ZQ12 1394 aa11.86□□□□□ -0.51
Trim9-201ENSMUST00000110520 Mroh2aD3Z750 1679 aa11.86□□□□□ -0.51
Trim9-201ENSMUST00000110520 Ptch1Q61115 1434 aa11.85□□□□□ -0.51
Trim9-201ENSMUST00000110520 Plekhm2Q80TQ5 1018 aa11.85□□□□□ -0.51
Trim9-201ENSMUST00000110520 Sv2bQ8BG39 683 aa11.85□□□□□ -0.51
Trim9-201ENSMUST00000110520 Map3k4O08648 1597 aa11.85□□□□□ -0.51
Trim9-201ENSMUST00000110520 Q4VA45 678 aa11.84□□□□□ -0.51
Trim9-201ENSMUST00000110520 Ciz1Q8VEH2 845 aa11.84□□□□□ -0.51
Trim9-201ENSMUST00000110520 Gapvd1Q6PAR5 1458 aa11.84□□□□□ -0.51
Trim9-201ENSMUST00000110520 Q3UPC7 1272 aa11.84□□□□□ -0.51
Trim9-201ENSMUST00000110520 Fhod3Q76LL6 1578 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Phactr2B1AVP0 632 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Fyb1O35601 819 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 TmpoQ61033 693 aaKnown RBP11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Gtf3c3Q3TMP1 882 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Erich6bQ9D4S6 220 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Tfip11Q9ERA6 838 aaKnown RBP11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Fmn2Q9JL04 1578 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Cul7Q8VE73 1689 aa11.83□□□□□ -0.52
Trim9-201ENSMUST00000110520 Fam208aQ69ZR9 1610 aaKnown RBP11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Pcmtd1P59913 357 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Ccdc171E9Q1U1 1324 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 TatQ8QZR1 454 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Smarca5Q91ZW3 1051 aaKnown RBP11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 MccE9PWI3 1003 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 CastP51125 788 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Nol12Q8BG17 217 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 TnikP83510 1323 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Cfdp1O88271 295 aaKnown RBP11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 Rassf8Q8CJ96 419 aa11.82□□□□□ -0.52
Trim9-201ENSMUST00000110520 AU022751B1B0V2 589 aa11.81□□□□□ -0.52
Trim9-201ENSMUST00000110520 IbtkQ6ZPR6 1352 aaKnown RBP11.81□□□□□ -0.52
Trim9-201ENSMUST00000110520 Rlbp1Q9Z275 317 aa11.81□□□□□ -0.52
Trim9-201ENSMUST00000110520 Gm16486A0A1D5RMD1 1434 aa11.81□□□□□ -0.52
Trim9-201ENSMUST00000110520 Fkbp4P30416 458 aa11.81□□□□□ -0.52
Trim9-201ENSMUST00000110520 Hmox1P14901 289 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 Cdc42bpaQ3UU96 1719 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 Q3UJC8 639 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 Dennd6aQ8BH65 605 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 Sh3bp5Q9Z131 463 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 MecomP14404 1042 aa11.8□□□□□ -0.52
Trim9-201ENSMUST00000110520 Atf7ipQ7TT18 1306 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Lmod3E9QA62 571 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms