RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Psma5Q9Z2U1 241 aaKnown RBP7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ccdc102aQ3TMW1 549 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Erc1Q99MI1 1120 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 SrrtQ99MR6 875 aaKnown RBP7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Cetn2Q9R1K9 172 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Cluap1Q8R3P7 413 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Cfap99A0A140LIX9 648 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Apol7aB2RT54 418 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Stmn1P54227 149 aaKnown RBP7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ccdc152E9PX14 254 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 Gbp2Q9Z0E6 589 aa7.24□□□□□ -1.25
Vcan-203ENSMUST00000109546 SelenooQ9DBC0 667 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Pole3Q9JKP7 145 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 DesP31001 469 aaKnown RBP7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Golga2Q921M4 999 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 1700019A02RikA0A087WPV9 146 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 NmiO35309 314 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Hdgfl1Q2VPR5 283 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Smc3Q9CW03 1217 aaKnown RBP7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Sept7O55131 436 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ppp1r9bQ6R891 817 aaKnown RBP7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Setd5Q5XJV7 1441 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ccdc42Q5SV66 316 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Rab11fip3Q8CHD8 1047 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Psmd1Q3TXS7 953 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ciz1Q8VEH2 845 aa7.23□□□□□ -1.25
Vcan-203ENSMUST00000109546 CastP51125 788 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Fmnl2A2APV2 1086 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Bbof1Q3V079 533 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 L1td1Q587J6 782 aaKnown RBP7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Med4Q9CQA5 270 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 SafbD3YXK2 937 aaKnown RBP7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Tubb4aQ9D6F9 444 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Mipol1Q9D9F8 279 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Irx6Q9ER75 438 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Tspyl3Q3UYP3 334 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 SarnpQ9D1J3 210 aaKnown RBP7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Fam114a1Q9D281 569 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 MvpQ9EQK5 861 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 A0A0U1RNP2 1173 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Stmn4P63042 189 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Smc4Q8CG47 1286 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Gbp9Q8BTS3 619 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Skor1Q8BX46 964 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Rfc1P35601 1131 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 PrkcshO08795 521 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Cetn4Q8K4K1 168 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Zmat2Q9CPW7 199 aa7.22□□□□□ -1.25
Vcan-203ENSMUST00000109546 Ctage5Q8R311 779 aa7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Gtpbp4Q99ME9 634 aaKnown RBP7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Mis12Q9CY25 206 aa7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Slc4a3P16283 1227 aa7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Hook3Q8BUK6 718 aa7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Als2cr12Q8BVM7 383 aa7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 AnlnQ8K298 1121 aaKnown RBP7.21□□□□□ -1.25
Vcan-203ENSMUST00000109546 Chmp3Q9CQ10 224 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Stag3O70576 1240 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Commd10Q8JZY2 202 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Sdccag8Q80UF4 717 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Homer1Q9Z2Y3 366 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Aebp1Q640N1 1128 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Rnf214Q8BFU3 668 aaKnown RBP7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Gm20521D3Z5F7 333 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Kif2aP28740 705 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 Rnf168Q80XJ2 565 aa7.21□□□□□ -1.26
Vcan-203ENSMUST00000109546 HdgfP51859 237 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Cacna2d3Q9Z1L5 1091 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Ccdc174Q3U155 467 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Speer4f1Q9D5Q6 258 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Lrrfip1Q3UZ39 729 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Erc2Q6PH08 957 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Ccdc70Q9D9B0 223 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Pafah1b1P63005 410 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Naa15Q80UM3 865 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Nap1l2P51860 460 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Q3TQI7 289 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Hspa5P20029 655 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Mcm2P97310 904 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Kif5bQ61768 963 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Mical1Q8VDP3 1048 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Basp1Q91XV3 226 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Znf653Q6YND2 615 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Ccdc146E9Q9F7 977 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Exoc8Q6PGF7 716 aa7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Brd2Q7JJ13 798 aaKnown RBP7.2□□□□□ -1.26
Vcan-203ENSMUST00000109546 Myo6Q64331 1265 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Mkrn1Q9QXP6 481 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Smco2Q9DA21 347 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Tubb5P99024 444 aaKnown RBP7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Paxbp1P58501 919 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Smarcc1P97496 1104 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 CenphQ9QYM8 241 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Tnip1Q9WUU8 647 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Kif5cP28738 956 aaKnown RBP7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Ints3Q7TPD0 1041 aaKnown RBP7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Ankrd24Q80VM7 985 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Swap70Q6A028 585 aaKnown RBP7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Cfap45Q9D9U9 551 aa7.19□□□□□ -1.26
Vcan-203ENSMUST00000109546 Trim30cD3YVI9 513 aa7.18□□□□□ -1.26
Vcan-203ENSMUST00000109546 Luzp1Q8R4U7 1068 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 314.7 ms