Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm25239-201ENSMUST00000174915 86 ntBASIC39.99■■■■□ 3.99
Bbof1Q3V079 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Bbof1Q3V079 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Bbof1Q3V079 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Bbof1Q3V079 Gm15042-201ENSMUST00000120212 883 ntBASIC35.28■■■■□ 3.24
Bbof1Q3V079 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Bbof1Q3V079 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
Bbof1Q3V079 Gm15045-201ENSMUST00000117359 883 ntBASIC34.48■■■■□ 3.11
Bbof1Q3V079 Gm24109-201ENSMUST00000175489 103 ntBASIC34.46■■■■□ 3.11
Bbof1Q3V079 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Bbof1Q3V079 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Bbof1Q3V079 Psd-208ENSMUST00000224556 2034 ntBASIC33.78■■■■□ 3
Bbof1Q3V079 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Bbof1Q3V079 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Bbof1Q3V079 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Bbof1Q3V079 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Bbof1Q3V079 Gm23366-201ENSMUST00000175022 89 ntBASIC33.51■■■□□ 2.95
Bbof1Q3V079 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Bbof1Q3V079 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.21■■■□□ 2.91
Bbof1Q3V079 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Bbof1Q3V079 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Bbof1Q3V079 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Bbof1Q3V079 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Bbof1Q3V079 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Bbof1Q3V079 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
Bbof1Q3V079 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Bbof1Q3V079 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Bbof1Q3V079 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Bbof1Q3V079 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.42■■■□□ 2.78
Bbof1Q3V079 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Bbof1Q3V079 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.37■■■□□ 2.77
Bbof1Q3V079 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Bbof1Q3V079 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Bbof1Q3V079 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Bbof1Q3V079 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.99■■■□□ 2.71
Bbof1Q3V079 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Bbof1Q3V079 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.89■■■□□ 2.7
Bbof1Q3V079 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Bbof1Q3V079 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Bbof1Q3V079 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
Bbof1Q3V079 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Bbof1Q3V079 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Bbof1Q3V079 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Bbof1Q3V079 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Bbof1Q3V079 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Bbof1Q3V079 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.49■■■□□ 2.63
Bbof1Q3V079 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Bbof1Q3V079 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.45■■■□□ 2.63
Bbof1Q3V079 Gm25238-201ENSMUST00000174914 89 ntBASIC31.43■■■□□ 2.62
Bbof1Q3V079 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Bbof1Q3V079 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Bbof1Q3V079 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Bbof1Q3V079 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Bbof1Q3V079 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.05■■■□□ 2.56
Bbof1Q3V079 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Bbof1Q3V079 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Bbof1Q3V079 Gm27325-201ENSMUST00000175467 74 ntBASIC30.94■■■□□ 2.54
Bbof1Q3V079 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.94■■■□□ 2.54
Bbof1Q3V079 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Bbof1Q3V079 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
Bbof1Q3V079 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Bbof1Q3V079 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Bbof1Q3V079 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.8■■■□□ 2.52
Bbof1Q3V079 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Bbof1Q3V079 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.73■■■□□ 2.51
Bbof1Q3V079 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Bbof1Q3V079 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Bbof1Q3V079 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Bbof1Q3V079 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Bbof1Q3V079 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.61■■■□□ 2.49
Bbof1Q3V079 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Bbof1Q3V079 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.59■■■□□ 2.49
Bbof1Q3V079 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
Bbof1Q3V079 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Bbof1Q3V079 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Bbof1Q3V079 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.57■■■□□ 2.48
Bbof1Q3V079 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.56■■■□□ 2.48
Bbof1Q3V079 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Bbof1Q3V079 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
Bbof1Q3V079 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Bbof1Q3V079 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Bbof1Q3V079 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Bbof1Q3V079 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Bbof1Q3V079 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Bbof1Q3V079 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.35■■■□□ 2.45
Bbof1Q3V079 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Bbof1Q3V079 Rab21-202ENSMUST00000218831 843 ntBASIC30.23■■■□□ 2.43
Bbof1Q3V079 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.16■■■□□ 2.42
Bbof1Q3V079 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Bbof1Q3V079 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Bbof1Q3V079 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Bbof1Q3V079 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.09■■■□□ 2.41
Bbof1Q3V079 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Bbof1Q3V079 Gm25262-201ENSMUST00000174934 133 ntBASIC30.05■■■□□ 2.4
Bbof1Q3V079 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Bbof1Q3V079 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Bbof1Q3V079 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Bbof1Q3V079 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Bbof1Q3V079 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Bbof1Q3V079 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms