RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Ttc41Q692V3 1318 aa20.5■□□□□ 0.87
Vcan-201ENSMUST00000109543 Tcerg1Q8CGF7 1100 aaKnown RBP20.49■□□□□ 0.87
Vcan-201ENSMUST00000109543 Speer4f1Q9D5Q6 258 aa20.49■□□□□ 0.87
Vcan-201ENSMUST00000109543 Ttc37F8VPK0 1563 aa20.49■□□□□ 0.87
Vcan-201ENSMUST00000109543 Ift172Q6VH22 1749 aa20.49■□□□□ 0.87
Vcan-201ENSMUST00000109543 CenpjQ569L8 1344 aa20.49■□□□□ 0.87
Vcan-201ENSMUST00000109543 Pak3Q61036 559 aa20.48■□□□□ 0.87
Vcan-201ENSMUST00000109543 Atp1b4Q99ME6 356 aa20.48■□□□□ 0.87
Vcan-201ENSMUST00000109543 Synj2Q9D2G5 1434 aa20.48■□□□□ 0.87
Vcan-201ENSMUST00000109543 Prkrip1Q9CWV6 186 aaKnown RBP20.48■□□□□ 0.87
Vcan-201ENSMUST00000109543 Prrc2bQ7TPM1 1486 aaKnown RBP20.47■□□□□ 0.87
Vcan-201ENSMUST00000109543 Stk26Q99JT2 416 aa20.47■□□□□ 0.87
Vcan-201ENSMUST00000109543 Kiaa1107Q80TK0 1369 aa20.47■□□□□ 0.87
Vcan-201ENSMUST00000109543 Golga2Q921M4 999 aa20.46■□□□□ 0.87
Vcan-201ENSMUST00000109543 Neurod2Q62414 383 aa20.45■□□□□ 0.87
Vcan-201ENSMUST00000109543 Ahdc1Q6PAL7 1594 aaKnown RBP20.45■□□□□ 0.86
Vcan-201ENSMUST00000109543 Hecw2Q6I6G8 1578 aa20.45■□□□□ 0.86
Vcan-201ENSMUST00000109543 Plekhh1Q80TI1 1356 aa20.45■□□□□ 0.86
Vcan-201ENSMUST00000109543 Hfm1D3Z4R1 1434 aa20.44■□□□□ 0.86
Vcan-201ENSMUST00000109543 Shq1Q7TMX5 569 aa20.43■□□□□ 0.86
Vcan-201ENSMUST00000109543 Ccdc30Q8BVF4 654 aa20.43■□□□□ 0.86
Vcan-201ENSMUST00000109543 KdrP35918 1367 aa20.43■□□□□ 0.86
Vcan-201ENSMUST00000109543 Qser1A2BIE1 1698 aa20.42■□□□□ 0.86
Vcan-201ENSMUST00000109543 Rwdd1Q9CQK7 243 aa20.42■□□□□ 0.86
Vcan-201ENSMUST00000109543 Scaf11E9PZM7 1456 aaKnown RBP20.41■□□□□ 0.86
Vcan-201ENSMUST00000109543 TnikP83510 1323 aa20.41■□□□□ 0.86
Vcan-201ENSMUST00000109543 Eif2ak4Q9QZ05 1648 aa20.41■□□□□ 0.86
Vcan-201ENSMUST00000109543 Rtl5Q5DTT4 599 aa20.41■□□□□ 0.86
Vcan-201ENSMUST00000109543 Afap1Q80YS6 731 aa20.41■□□□□ 0.86
Vcan-201ENSMUST00000109543 PtprmP28828 1452 aa20.4■□□□□ 0.86
Vcan-201ENSMUST00000109543 Exosc9Q9JHI7 438 aaKnown RBP20.39■□□□□ 0.86
Vcan-201ENSMUST00000109543 IbtkQ6ZPR6 1352 aaKnown RBP20.39■□□□□ 0.85
Vcan-201ENSMUST00000109543 Egfem1Q8C088 590 aa20.39■□□□□ 0.85
Vcan-201ENSMUST00000109543 P2rx7Q9Z1M0 595 aa20.39■□□□□ 0.85
Vcan-201ENSMUST00000109543 Uspl1Q3ULM6 1089 aa20.38■□□□□ 0.85
Vcan-201ENSMUST00000109543 Mbd3Q9Z2D8 285 aaKnown RBP20.38■□□□□ 0.85
Vcan-201ENSMUST00000109543 Arhgap23Q69ZH9 1483 aa20.38■□□□□ 0.85
Vcan-201ENSMUST00000109543 Cald1E9QA15 768 aaKnown RBP20.37■□□□□ 0.85
Vcan-201ENSMUST00000109543 Zranb1Q7M760 708 aa20.37■□□□□ 0.85
Vcan-201ENSMUST00000109543 GsdmaQ9EST1 446 aa20.36■□□□□ 0.85
Vcan-201ENSMUST00000109543 Apbb1Q9QXJ1 710 aa20.36■□□□□ 0.85
Vcan-201ENSMUST00000109543 Map4k4P97820 1233 aaKnown RBP20.35■□□□□ 0.85
Vcan-201ENSMUST00000109543 Q9D9H8 365 aa20.35■□□□□ 0.85
Vcan-201ENSMUST00000109543 Cep170bQ80U49 1574 aa20.34■□□□□ 0.85
Vcan-201ENSMUST00000109543 Ralbp1Q62172 648 aa20.34■□□□□ 0.85
Vcan-201ENSMUST00000109543 Rsph4aQ8BYM7 716 aa20.33■□□□□ 0.84
Vcan-201ENSMUST00000109543 Nrxn1Q9CS84 1514 aa20.32■□□□□ 0.84
Vcan-201ENSMUST00000109543 Kif13aQ9EQW7 1749 aa20.32■□□□□ 0.84
Vcan-201ENSMUST00000109543 CltcQ68FD5 1675 aaKnown RBP20.31■□□□□ 0.84
Vcan-201ENSMUST00000109543 Utp14aQ640M1 767 aaKnown RBP20.31■□□□□ 0.84
Vcan-201ENSMUST00000109543 Gas2l2Q5SSG4 860 aa20.3■□□□□ 0.84
Vcan-201ENSMUST00000109543 Naip7Q9JIB3 1402 aa20.3■□□□□ 0.84
Vcan-201ENSMUST00000109543 Arhgef28P97433 1693 aa20.29■□□□□ 0.84
Vcan-201ENSMUST00000109543 NpatQ8BMA5 1420 aa20.28■□□□□ 0.84
Vcan-201ENSMUST00000109543 Itsn1Q9Z0R4 1714 aa20.28■□□□□ 0.84
Vcan-201ENSMUST00000109543 Iqsec2Q5DU25 1478 aa20.27■□□□□ 0.84
Vcan-201ENSMUST00000109543 Gsto1O09131 240 aa20.27■□□□□ 0.84
Vcan-201ENSMUST00000109543 Atp2b2Q9R0K7 1198 aa20.27■□□□□ 0.84
Vcan-201ENSMUST00000109543 Kdm2bQ6P1G2 1309 aa20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 Tsen2Q6P7W5 460 aa20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 Cdk19Q8BWD8 501 aa20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 Atxn3Q9CVD2 355 aa20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 U2af1Q9D883 239 aaKnown RBP20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 Adgrl1Q80TR1 1466 aa20.25■□□□□ 0.83
Vcan-201ENSMUST00000109543 Ttll13A4Q9F6 804 aa20.24■□□□□ 0.83
Vcan-201ENSMUST00000109543 Apaf1O88879 1249 aa20.24■□□□□ 0.83
Vcan-201ENSMUST00000109543 Abca14E9Q8F8 1683 aa20.22■□□□□ 0.83
Vcan-201ENSMUST00000109543 Ercc6l2Q9JIM3 1537 aa20.21■□□□□ 0.83
Vcan-201ENSMUST00000109543 Med14A2ABV5 1459 aaKnown RBP20.21■□□□□ 0.83
Vcan-201ENSMUST00000109543 NinlQ6ZQ12 1394 aa20.2■□□□□ 0.82
Vcan-201ENSMUST00000109543 B4galnt3Q6L8S8 986 aa20.2■□□□□ 0.82
Vcan-201ENSMUST00000109543 Plekhg1F6S200 1446 aa20.2■□□□□ 0.82
Vcan-201ENSMUST00000109543 Ipo9Q91YE6 1041 aa20.19■□□□□ 0.82
Vcan-201ENSMUST00000109543 Asxl2Q8BZ32 1370 aa20.18■□□□□ 0.82
Vcan-201ENSMUST00000109543 RictorQ6QI06 1708 aa20.18■□□□□ 0.82
Vcan-201ENSMUST00000109543 NktrP30415 1453 aa20.17■□□□□ 0.82
Vcan-201ENSMUST00000109543 Tspyl2Q7TQI8 677 aa20.16■□□□□ 0.82
Vcan-201ENSMUST00000109543 Pank1Q8K4K6 548 aa20.15■□□□□ 0.82
Vcan-201ENSMUST00000109543 Dbr1Q923B1 550 aa20.15■□□□□ 0.82
Vcan-201ENSMUST00000109543 FanciQ8K368 1330 aa20.15■□□□□ 0.82
Vcan-201ENSMUST00000109543 Polr3glQ8R0C0 218 aa20.15■□□□□ 0.82
Vcan-201ENSMUST00000109543 Zc3h13E9Q784 1729 aaKnown RBP20.14■□□□□ 0.81
Vcan-201ENSMUST00000109543 Ksr2Q3UVC0 959 aa20.13■□□□□ 0.81
Vcan-201ENSMUST00000109543 EspnQ9ET47 871 aa20.13■□□□□ 0.81
Vcan-201ENSMUST00000109543 Psme1P97371 249 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 Chmp5Q9D7S9 219 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 Dusp27Q148W8 1138 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 Trim26Q99PN3 545 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 Nwd1A6H603 1563 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 PplQ9R269 1755 aa20.11■□□□□ 0.81
Vcan-201ENSMUST00000109543 Trim58Q5NCC9 485 aa20.1■□□□□ 0.81
Vcan-201ENSMUST00000109543 Txndc2Q6P902 515 aa20.1■□□□□ 0.81
Vcan-201ENSMUST00000109543 Smc5Q8CG46 1101 aaKnown RBP20.1■□□□□ 0.81
Vcan-201ENSMUST00000109543 Map3k19E9Q3S4 1311 aa20.1■□□□□ 0.81
Vcan-201ENSMUST00000109543 Zmym3Q9JLM4 1370 aa20.1■□□□□ 0.81
Vcan-201ENSMUST00000109543 Ncbp3Q8BZR9 615 aaKnown RBP20.09■□□□□ 0.81
Vcan-201ENSMUST00000109543 Mapk8ip3Q9ESN9 1337 aa20.09■□□□□ 0.81
Vcan-201ENSMUST00000109543 Dip2aQ8BWT5 1523 aa20.09■□□□□ 0.81
Vcan-201ENSMUST00000109543 Ccar1Q8CH18 1146 aaKnown RBP20.07■□□□□ 0.8
Vcan-201ENSMUST00000109543 Znf521Q6KAS7 1311 aa20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms