RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Swt1Q9DBQ9 907 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Ttll13A4Q9F6 804 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Gnai1B2RSH2 354 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Rbm28Q8CGC6 750 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Sugp2Q8CH09 1067 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Gnai3Q9DC51 354 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Gsto1O09131 240 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Pdcl3Q8BVF2 240 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Rab11fip3Q8CHD8 1047 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 UacaQ8CGB3 1411 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Gm10471E9Q1C7 252 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 NexnQ7TPW1 607 aa15.15■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Cfap99A0A140LIX9 648 aa15.14■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 HmmrQ00547 794 aaKnown RBP15.14■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Tnpo1Q8BFY9 898 aaKnown RBP15.14■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Themis2Q91YX0 663 aa15.14■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Commd10Q8JZY2 202 aa15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Anp32eP97822 260 aaKnown RBP15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Carmil1Q6EDY6 1374 aa15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Rbm5Q91YE7 815 aaKnown RBP15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Tdrd9Q14BI7 1383 aa15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 WrnO09053 1401 aa15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Q9D9H8 365 aa15.13■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Apaf1O88879 1249 aa15.12■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 MpripP97434 1024 aa15.12■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Trim29Q8R2Q0 587 aa15.12■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Rsph4aQ8BYM7 716 aa15.12■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 ErbinQ80TH2 1402 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Fkbp4P30416 458 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Zpr1Q62384 459 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Ubxn4Q8VCH8 506 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Agtpbp1Q641K1 1218 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Cdca7Q9D0M2 382 aa15.11■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Zfp644E9QA22 1323 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Necab1Q8BG18 352 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Gsdma3Q5Y4Y6 464 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Cc2d2bA0A286YDU8 1405 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Sf3b2Q3UJB0 878 aaKnown RBP15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Kcnh8P59111 1102 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Nol8Q3UHX0 1147 aaKnown RBP15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 TatQ8QZR1 454 aa15.1■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Atl3Q91YH5 541 aa15.09■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Shroom4Q1W617 1475 aa15.09■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Frmd3Q8BHD4 595 aa15.09■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 NaspQ99MD9 773 aaKnown RBP15.09■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Cep89Q9CZX2 791 aa15.08■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Cnnm1Q0GA42 951 aa15.08■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Ints3Q7TPD0 1041 aaKnown RBP15.08■□□□□ 0.01
Ccdc88c-201ENSMUST00000068411 Zranb3Q6NZP1 1069 aa15.08■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Atp2b2Q9R0K7 1198 aa15.08■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Psma5Q9Z2U1 241 aaKnown RBP15.08■□□□□ 0
Ccdc88c-201ENSMUST00000068411 SkilQ60665 675 aa15.08■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Ppp2r3aB2RXC8 1150 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Cchcr1Q8K2I2 770 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Sirt1Q923E4 737 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Plagl1Q9JLQ4 704 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Ccdc173A0JLY1 547 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Secisbp2lQ6A098 1086 aaKnown RBP15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Prkrip1Q9CWV6 186 aaKnown RBP15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 NefhP19246 1090 aa15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Puf60Q3UEB3 564 aaKnown RBP15.07■□□□□ 0
Ccdc88c-201ENSMUST00000068411 EzrP26040 586 aaKnown RBP15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Mns1Q61884 491 aa15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 SelenooQ9DBC0 667 aa15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 IkQ9Z1M8 557 aaKnown RBP15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Cetn4Q8K4K1 168 aa15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Washc4Q3UMB9 1173 aa15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Gigyf1Q99MR1 1044 aaKnown RBP15.06■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Ppp4r3bQ922R5 820 aa15.05■□□□□ 0
Ccdc88c-201ENSMUST00000068411 Cabp2Q9JLK4 216 aa15.05■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Smg7Q5RJH6 1138 aaKnown RBP15.05■□□□□ -0
Ccdc88c-201ENSMUST00000068411 UvssaQ9D479 717 aa15.05■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Ddx54Q8K4L0 874 aaKnown RBP15.05■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Znf771Q8BJ90 317 aa15.04■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Atf3Q60765 181 aa15.04■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Kcnn1Q9EQR3 537 aa15.04■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Kif3aP28741 701 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Fbln2P37889 1221 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 ArsiQ32KI9 573 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Cnnm3Q32NY4 713 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Jakmip1Q8BVL9 626 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Ccar2Q8VDP4 922 aaKnown RBP15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Sel1lQ9Z2G6 790 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Zkscan2G3X952 960 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Olfml1Q8BSH2 233 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Stk38Q91VJ4 465 aa15.03■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Plekhh1Q80TI1 1356 aa15.02■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Odf2lQ9D478 642 aa15.02■□□□□ -0
Ccdc88c-201ENSMUST00000068411 TbcaP48428 108 aaKnown RBP15.02■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Cog6Q8R3I3 657 aa15.02■□□□□ -0
Ccdc88c-201ENSMUST00000068411 Map3k13Q1HKZ5 959 aa15.02□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Gprasp1Q5U4C1 1347 aa15.02□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Tmco3Q8BH01 678 aa15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Ppp2r1aQ76MZ3 589 aa15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Dusp9Q7TNL7 452 aa15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Trim30cD3YVI9 513 aa15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Zfp444Q3TDV8 331 aaKnown RBP15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Cwc27Q3TKY6 469 aa15.01□□□□□ -0.01
Ccdc88c-201ENSMUST00000068411 Prpf4bQ61136 1007 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms