RNA–Protein interactions for RNA: ENSMUST00000048782.6

Trem1-201, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem1, Length 2,993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-201ENSMUST00000048782 Nphp4P59240 1425 aa13.34□□□□□ -0.27
Trem1-201ENSMUST00000048782 Cdk5rap2Q8K389 1822 aa13.34□□□□□ -0.27
Trem1-201ENSMUST00000048782 Ift172Q6VH22 1749 aa13.32□□□□□ -0.28
Trem1-201ENSMUST00000048782 B4galnt3Q6L8S8 986 aa13.32□□□□□ -0.28
Trem1-201ENSMUST00000048782 Mroh1E0CZ22 1640 aa13.31□□□□□ -0.28
Trem1-201ENSMUST00000048782 Col17a1Q07563 1470 aa13.31□□□□□ -0.28
Trem1-201ENSMUST00000048782 Q7TT23 1179 aa13.31□□□□□ -0.28
Trem1-201ENSMUST00000048782 Kif3bQ61771 747 aa13.3□□□□□ -0.28
Trem1-201ENSMUST00000048782 Isy1Q69ZQ2 285 aaKnown RBP13.29□□□□□ -0.28
Trem1-201ENSMUST00000048782 PrxO55103 1391 aa13.29□□□□□ -0.28
Trem1-201ENSMUST00000048782 AatkQ80YE4 1365 aa13.29□□□□□ -0.28
Trem1-201ENSMUST00000048782 Hsp90ab1P11499 724 aaKnown RBP13.28□□□□□ -0.28
Trem1-201ENSMUST00000048782 Kdm5aQ3UXZ9 1690 aa13.28□□□□□ -0.28
Trem1-201ENSMUST00000048782 Knl1Q66JQ7 1612 aa13.28□□□□□ -0.28
Trem1-201ENSMUST00000048782 Eif2ak4Q9QZ05 1648 aa13.28□□□□□ -0.28
Trem1-201ENSMUST00000048782 MaddQ80U28 1577 aa13.27□□□□□ -0.28
Trem1-201ENSMUST00000048782 Ccdc183A2AJB1 534 aa13.27□□□□□ -0.28
Trem1-201ENSMUST00000048782 Ak7Q9D2H2 614 aa13.27□□□□□ -0.28
Trem1-201ENSMUST00000048782 Grwd1Q810D6 446 aaKnown RBP13.27□□□□□ -0.29
Trem1-201ENSMUST00000048782 Rab3gap2Q8BMG7 1366 aa13.27□□□□□ -0.29
Trem1-201ENSMUST00000048782 Myom1Q62234 1667 aaKnown RBP13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Tmf1B9EKI3 1091 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 KdrP35918 1367 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Gm16486A0A1D5RMD1 1434 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Ifit1bl1D3Z6F0 470 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Zscan10Q3URR7 782 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Ptch1Q61115 1434 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Rad21Q61550 635 aaKnown RBP13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Eif2s2Q99L45 331 aaKnown RBP13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 Myo3aQ8K3H5 1613 aa13.26□□□□□ -0.29
Trem1-201ENSMUST00000048782 DmtnQ9WV69 405 aa13.24□□□□□ -0.29
Trem1-201ENSMUST00000048782 Skint5A7XUY5 1461 aa13.24□□□□□ -0.29
Trem1-201ENSMUST00000048782 Pank3Q8R2W9 370 aa13.24□□□□□ -0.29
Trem1-201ENSMUST00000048782 Slc52a2Q9D8F3 450 aa13.24□□□□□ -0.29
Trem1-201ENSMUST00000048782 Arid3cA6PWV5 409 aa13.23□□□□□ -0.29
Trem1-201ENSMUST00000048782 Trim30dE9PWL0 497 aa13.23□□□□□ -0.29
Trem1-201ENSMUST00000048782 Znf521Q6KAS7 1311 aa13.23□□□□□ -0.29
Trem1-201ENSMUST00000048782 Dnttip2Q8R2M2 758 aaKnown RBP13.23□□□□□ -0.29
Trem1-201ENSMUST00000048782 Sptbn5F6UCX4 1208 aa13.23□□□□□ -0.29
Trem1-201ENSMUST00000048782 Gprasp1Q5U4C1 1347 aa13.22□□□□□ -0.29
Trem1-201ENSMUST00000048782 Srcin1Q9QWI6 1250 aa13.21□□□□□ -0.29
Trem1-201ENSMUST00000048782 Arhgap23Q69ZH9 1483 aa13.21□□□□□ -0.29
Trem1-201ENSMUST00000048782 Esx1O88933 382 aa13.21□□□□□ -0.29
Trem1-201ENSMUST00000048782 Dbr1Q923B1 550 aa13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 Antxr1Q9CZ52 562 aa13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 Rabep1O35551 862 aa13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 Ppp2r1aQ76MZ3 589 aa13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 Ahdc1Q6PAL7 1594 aaKnown RBP13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 Dcaf11Q91VU6 549 aa13.2□□□□□ -0.3
Trem1-201ENSMUST00000048782 PalldQ9ET54 1408 aa13.19□□□□□ -0.3
Trem1-201ENSMUST00000048782 Rrp12Q6P5B0 1295 aaKnown RBP13.19□□□□□ -0.3
Trem1-201ENSMUST00000048782 RictorQ6QI06 1708 aa13.19□□□□□ -0.3
Trem1-201ENSMUST00000048782 Ralbp1Q62172 648 aa13.18□□□□□ -0.3
Trem1-201ENSMUST00000048782 Inpp5dQ9ES52 1191 aa13.18□□□□□ -0.3
Trem1-201ENSMUST00000048782 Fam135bQ9DAI6 1403 aa13.18□□□□□ -0.3
Trem1-201ENSMUST00000048782 CltcQ68FD5 1675 aaKnown RBP13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 Hfm1D3Z4R1 1434 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 Tbc1d32Q3URV1 1296 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 CrbnQ8C7D2 445 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 InsrP15208 1372 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 Ccdc30Q8BVF4 654 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 Atl3Q91YH5 541 aa13.17□□□□□ -0.3
Trem1-201ENSMUST00000048782 Ppp2r3aB2RXC8 1150 aa13.16□□□□□ -0.3
Trem1-201ENSMUST00000048782 Usp19Q3UJD6 1360 aa13.16□□□□□ -0.3
Trem1-201ENSMUST00000048782 Trim58Q5NCC9 485 aa13.15□□□□□ -0.3
Trem1-201ENSMUST00000048782 Zc3h13E9Q784 1729 aaKnown RBP13.15□□□□□ -0.3
Trem1-201ENSMUST00000048782 Yeats2Q3TUF7 1407 aa13.15□□□□□ -0.31
Trem1-201ENSMUST00000048782 Plekhg1F6S200 1446 aa13.14□□□□□ -0.31
Trem1-201ENSMUST00000048782 Itsn1Q9Z0R4 1714 aa13.14□□□□□ -0.31
Trem1-201ENSMUST00000048782 Mcm4P49717 862 aa13.14□□□□□ -0.31
Trem1-201ENSMUST00000048782 Hs1bp3Q3TC93 395 aa13.14□□□□□ -0.31
Trem1-201ENSMUST00000048782 Gtf2e1Q9D0D5 440 aa13.14□□□□□ -0.31
Trem1-201ENSMUST00000048782 Qser1A2BIE1 1698 aa13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Gemin5Q8BX17 1502 aaKnown RBP13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Tex2Q6ZPJ0 1128 aaKnown RBP13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Ddrgk1Q80WW9 315 aa13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Lrrc7Q80TE7 1490 aa13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Srpk2O54781 681 aaKnown RBP13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Tpm2P58774 284 aa13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Fam184bQ0KK56 942 aa13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Ncbp3Q8BZR9 615 aaKnown RBP13.13□□□□□ -0.31
Trem1-201ENSMUST00000048782 Speer4f1Q9D5Q6 258 aa13.12□□□□□ -0.31
Trem1-201ENSMUST00000048782 Gm20521D3Z5F7 333 aa13.12□□□□□ -0.31
Trem1-201ENSMUST00000048782 NpatQ8BMA5 1420 aa13.12□□□□□ -0.31
Trem1-201ENSMUST00000048782 Med14A2ABV5 1459 aaKnown RBP13.1□□□□□ -0.31
Trem1-201ENSMUST00000048782 Sall3Q62255 1320 aa13.1□□□□□ -0.31
Trem1-201ENSMUST00000048782 Gm6268A2A3U9 297 aa13.1□□□□□ -0.31
Trem1-201ENSMUST00000048782 Arhgef28P97433 1693 aa13.1□□□□□ -0.31
Trem1-201ENSMUST00000048782 Lmtk3Q5XJV6 1424 aa13.1□□□□□ -0.31
Trem1-201ENSMUST00000048782 Clcn1Q64347 994 aa13.09□□□□□ -0.31
Trem1-201ENSMUST00000048782 Tnpo1Q8BFY9 898 aaKnown RBP13.09□□□□□ -0.31
Trem1-201ENSMUST00000048782 Phlpp2Q8BXA7 1320 aa13.09□□□□□ -0.31
Trem1-201ENSMUST00000048782 Zbtb7cQ8VCZ7 619 aa13.09□□□□□ -0.31
Trem1-201ENSMUST00000048782 PtprmP28828 1452 aa13.08□□□□□ -0.31
Trem1-201ENSMUST00000048782 Map4k4P97820 1233 aaKnown RBP13.08□□□□□ -0.32
Trem1-201ENSMUST00000048782 4930567H17RikQ3V0K5 233 aa13.08□□□□□ -0.32
Trem1-201ENSMUST00000048782 Usp40Q8BWR4 1235 aa13.08□□□□□ -0.32
Trem1-201ENSMUST00000048782 Ncapd2Q8K2Z4 1392 aa13.08□□□□□ -0.32
Trem1-201ENSMUST00000048782 Nrxn1Q9CS84 1514 aa13.08□□□□□ -0.32
Trem1-201ENSMUST00000048782 Uspl1Q3ULM6 1089 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms