RNA–Protein interactions for RNA: ENSMUST00000048782.6

Trem1-201, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem1, Length 2,993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-201ENSMUST00000048782 Gm35339A0A140LHH9 1649 aa20.04■□□□□ 0.8
Trem1-201ENSMUST00000048782 NischQ80TM9 1593 aa19.87■□□□□ 0.77
Trem1-201ENSMUST00000048782 Abcc9P70170 1546 aa19.43■□□□□ 0.7
Trem1-201ENSMUST00000048782 Abcc8B2RUS7 1588 aa19.02■□□□□ 0.64
Trem1-201ENSMUST00000048782 Rtl1Q7M732 1744 aa18.16■□□□□ 0.5
Trem1-201ENSMUST00000048782 Dcaf1Q80TR8 1506 aa18.04■□□□□ 0.48
Trem1-201ENSMUST00000048782 Rpgrip1Q9EPQ2 1331 aa18■□□□□ 0.47
Trem1-201ENSMUST00000048782 Ccdc180J3QNE4 1664 aa17.82■□□□□ 0.44
Trem1-201ENSMUST00000048782 ScribQ80U72 1612 aa17.77■□□□□ 0.43
Trem1-201ENSMUST00000048782 Rhox8Q6VSS7 320 aa17.55■□□□□ 0.4
Trem1-201ENSMUST00000048782 NacadQ5SWP3 1504 aa17.4■□□□□ 0.38
Trem1-201ENSMUST00000048782 Rb1cc1Q9ESK9 1588 aa17.37■□□□□ 0.37
Trem1-201ENSMUST00000048782 Kdm5dQ62240 1548 aa17.37■□□□□ 0.37
Trem1-201ENSMUST00000048782 Crybg2B7ZCC2 1516 aa17.3■□□□□ 0.36
Trem1-201ENSMUST00000048782 Baz1aO88379 1555 aa17.29■□□□□ 0.36
Trem1-201ENSMUST00000048782 Acin1Q9JIX8 1338 aaKnown RBP17.19■□□□□ 0.34
Trem1-201ENSMUST00000048782 Zcchc6Q5BLK4 1491 aaKnown RBP17.17■□□□□ 0.34
Trem1-201ENSMUST00000048782 Sycp2Q9CUU3 1500 aa17■□□□□ 0.31
Trem1-201ENSMUST00000048782 Smarca2Q6DIC0 1577 aa16.89■□□□□ 0.29
Trem1-201ENSMUST00000048782 HrcG5E8J6 738 aa16.82■□□□□ 0.28
Trem1-201ENSMUST00000048782 Pcgf6Q99NA9 353 aa16.67■□□□□ 0.26
Trem1-201ENSMUST00000048782 BicraF8VPZ9 1578 aa16.56■□□□□ 0.24
Trem1-201ENSMUST00000048782 Trim41Q5NCC3 630 aa16.42■□□□□ 0.22
Trem1-201ENSMUST00000048782 Brd4Q9ESU6 1400 aaKnown RBP16.4■□□□□ 0.22
Trem1-201ENSMUST00000048782 Ccdc136Q3TVA9 1136 aa16.24■□□□□ 0.19
Trem1-201ENSMUST00000048782 Cecr2E9Q2Z1 1453 aa16.23■□□□□ 0.19
Trem1-201ENSMUST00000048782 Cttnbp2B9EJA2 1648 aa16.22■□□□□ 0.19
Trem1-201ENSMUST00000048782 Smarca4Q3TKT4 1613 aaKnown RBP16.21■□□□□ 0.19
Trem1-201ENSMUST00000048782 Ehmt2Q9Z148 1263 aaKnown RBP16.21■□□□□ 0.19
Trem1-201ENSMUST00000048782 Las1lA2BE28 776 aaKnown RBP16.19■□□□□ 0.18
Trem1-201ENSMUST00000048782 Synj1Q8CHC4 1574 aa16.17■□□□□ 0.18
Trem1-201ENSMUST00000048782 CftrP26361 1476 aa16.16■□□□□ 0.18
Trem1-201ENSMUST00000048782 Cep164Q5DU05 1446 aa16.14■□□□□ 0.17
Trem1-201ENSMUST00000048782 Supt5hO55201 1082 aaKnown RBP16.11■□□□□ 0.17
Trem1-201ENSMUST00000048782 Golga3P55937 1487 aa16.1■□□□□ 0.17
Trem1-201ENSMUST00000048782 Top2bQ64511 1612 aa16.08■□□□□ 0.17
Trem1-201ENSMUST00000048782 Neurod1Q60867 357 aa16■□□□□ 0.15
Trem1-201ENSMUST00000048782 Atad2bE9Q166 1460 aaKnown RBP16■□□□□ 0.15
Trem1-201ENSMUST00000048782 Pds5bQ4VA53 1446 aaKnown RBP15.97■□□□□ 0.15
Trem1-201ENSMUST00000048782 Cngb1E1AZ71 1325 aa15.96■□□□□ 0.15
Trem1-201ENSMUST00000048782 NefmP08553 848 aa15.96■□□□□ 0.14
Trem1-201ENSMUST00000048782 Iqgap2Q3UQ44 1575 aa15.95■□□□□ 0.14
Trem1-201ENSMUST00000048782 Myt1Q8CFC2 1127 aa15.94■□□□□ 0.14
Trem1-201ENSMUST00000048782 Rsf1E9PWW9 1441 aaKnown RBP15.82■□□□□ 0.12
Trem1-201ENSMUST00000048782 Fmn1Q05860 1466 aa15.8■□□□□ 0.12
Trem1-201ENSMUST00000048782 Anks4bQ8K3X6 423 aa15.8■□□□□ 0.12
Trem1-201ENSMUST00000048782 TnnQ80Z71 1560 aa15.73■□□□□ 0.11
Trem1-201ENSMUST00000048782 Ccdc88bQ4QRL3 1481 aa15.73■□□□□ 0.11
Trem1-201ENSMUST00000048782 Wdr62Q3U3T8 1523 aa15.72■□□□□ 0.11
Trem1-201ENSMUST00000048782 Top2aQ01320 1528 aaKnown RBP15.69■□□□□ 0.1
Trem1-201ENSMUST00000048782 Cc2d2aQ8CFW7 1633 aa15.69■□□□□ 0.1
Trem1-201ENSMUST00000048782 Frmpd1A2AKB4 1549 aa15.62■□□□□ 0.09
Trem1-201ENSMUST00000048782 1700123L14RikQ3V2K7 440 aa15.61■□□□□ 0.09
Trem1-201ENSMUST00000048782 CenpbP27790 599 aa15.61■□□□□ 0.09
Trem1-201ENSMUST00000048782 Ercc6F8VPZ5 1481 aa15.59■□□□□ 0.09
Trem1-201ENSMUST00000048782 Lamc3Q9R0B6 1581 aa15.59■□□□□ 0.09
Trem1-201ENSMUST00000048782 Aplp2Q06335 707 aa15.59■□□□□ 0.09
Trem1-201ENSMUST00000048782 Esf1Q3V1V3 845 aaKnown RBP15.59■□□□□ 0.09
Trem1-201ENSMUST00000048782 Zeb1Q64318 1117 aa15.59■□□□□ 0.09
Trem1-201ENSMUST00000048782 Sall2Q9QX96 1004 aa15.58■□□□□ 0.08
Trem1-201ENSMUST00000048782 Chic1Q8CBW7 227 aa15.57■□□□□ 0.08
Trem1-201ENSMUST00000048782 Baz1bQ9Z277 1479 aa15.56■□□□□ 0.08
Trem1-201ENSMUST00000048782 Rapgef2Q8CHG7 1496 aa15.55■□□□□ 0.08
Trem1-201ENSMUST00000048782 Thoc2B1AZI6 1594 aaKnown RBP15.54■□□□□ 0.08
Trem1-201ENSMUST00000048782 Mier1Q5UAK0 511 aa15.54■□□□□ 0.08
Trem1-201ENSMUST00000048782 Unc13aQ4KUS2 1712 aa15.5■□□□□ 0.07
Trem1-201ENSMUST00000048782 Eif4g1Q6NZJ6 1600 aaKnown RBP15.46■□□□□ 0.07
Trem1-201ENSMUST00000048782 Csrnp3P59055 597 aa15.43■□□□□ 0.06
Trem1-201ENSMUST00000048782 Fam135aQ6NS59 1506 aa15.4■□□□□ 0.06
Trem1-201ENSMUST00000048782 Cdk11bP24788 784 aaKnown RBP15.4■□□□□ 0.06
Trem1-201ENSMUST00000048782 ClspnQ80YR7 1315 aa15.39■□□□□ 0.05
Trem1-201ENSMUST00000048782 Phldb1Q6PDH0 1371 aaKnown RBP15.36■□□□□ 0.05
Trem1-201ENSMUST00000048782 NrkQ9R0G8 1455 aa15.35■□□□□ 0.05
Trem1-201ENSMUST00000048782 Camsap1A2AHC3 1581 aa15.33■□□□□ 0.05
Trem1-201ENSMUST00000048782 Cep162Q6ZQ06 1403 aa15.32■□□□□ 0.04
Trem1-201ENSMUST00000048782 Nop58Q6DFW4 536 aaKnown RBP15.31■□□□□ 0.04
Trem1-201ENSMUST00000048782 Map3k1P53349 1493 aa15.29■□□□□ 0.04
Trem1-201ENSMUST00000048782 Ccdc18Q640L5 1455 aa15.25■□□□□ 0.03
Trem1-201ENSMUST00000048782 Shroom4Q1W617 1475 aa15.23■□□□□ 0.03
Trem1-201ENSMUST00000048782 Kif15Q6P9L6 1387 aa15.22■□□□□ 0.03
Trem1-201ENSMUST00000048782 Gab3Q8BSM5 595 aa15.2■□□□□ 0.02
Trem1-201ENSMUST00000048782 Grin2bQ01097 1482 aa15.19■□□□□ 0.02
Trem1-201ENSMUST00000048782 Wdr66E9Q743 1299 aa15.18■□□□□ 0.02
Trem1-201ENSMUST00000048782 AqrQ8CFQ3 1481 aaKnown RBP15.17■□□□□ 0.02
Trem1-201ENSMUST00000048782 Aebp2Q9Z248 504 aaKnown RBP15.16■□□□□ 0.02
Trem1-201ENSMUST00000048782 Arhgap35Q91YM2 1499 aa15.15■□□□□ 0.02
Trem1-201ENSMUST00000048782 Efcab5A0JP43 1406 aa15.1■□□□□ 0.01
Trem1-201ENSMUST00000048782 Tnnt3Q9QZ47 272 aa15.1■□□□□ 0.01
Trem1-201ENSMUST00000048782 TonslQ6NZL6 1363 aa15.07■□□□□ 0
Trem1-201ENSMUST00000048782 Mroh2bQ7M6Y6 1581 aa15.06■□□□□ 0
Trem1-201ENSMUST00000048782 PtprkP35822 1457 aa15.06■□□□□ 0
Trem1-201ENSMUST00000048782 Erich3F6QRE9 1637 aa15.05■□□□□ 0
Trem1-201ENSMUST00000048782 Cux2P70298 1426 aa15.05■□□□□ -0
Trem1-201ENSMUST00000048782 PogzQ8BZH4 1409 aaKnown RBP15.02■□□□□ -0
Trem1-201ENSMUST00000048782 DiexfQ8BTT6 772 aaKnown RBP15.02■□□□□ -0
Trem1-201ENSMUST00000048782 Gpatch8A2A6A1 1505 aa15.02■□□□□ -0
Trem1-201ENSMUST00000048782 LrpprcQ6PB66 1392 aaKnown RBP14.99□□□□□ -0.01
Trem1-201ENSMUST00000048782 UbtfP25976 765 aaKnown RBP14.97□□□□□ -0.01
Trem1-201ENSMUST00000048782 Eea1Q8BL66 1411 aa14.97□□□□□ -0.01
Trem1-201ENSMUST00000048782 Clip1Q922J3 1391 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 244.9 ms