RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 NgefQ8CHT1 710 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Q9D2X8 372 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Arhgef12Q8R4H2 1543 aaKnown RBP13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Eif4g2Q62448 906 aaKnown RBP13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Ak9G3UYQ4 1894 aa13.97□□□□□ -0.17
Topbp1-201ENSMUST00000035164 HnrnpuQ8VEK3 800 aaKnown RBP13.97□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Kdm3bQ6ZPY7 1562 aa13.97□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Ubap1lG3UW59 384 aa13.97□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Stard8Q8K031 1019 aa13.97□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Chmp4bQ9D8B3 224 aaKnown RBP13.96□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Cpsf1Q9EPU4 1441 aaKnown RBP13.96□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Lemd3Q9WU40 921 aa13.96□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Phlpp2Q8BXA7 1320 aa13.96□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Magi1Q6RHR9 1471 aa13.95□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Cul7Q8VE73 1689 aa13.95□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Usp16Q99LG0 825 aa13.93□□□□□ -0.18
Topbp1-201ENSMUST00000035164 ErbinQ80TH2 1402 aa13.93□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Tpm2P58774 284 aa13.93□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Syce3B5KM66 88 aa13.92□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Tbc1d9Q3UYK3 1264 aa13.92□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Ric3Q8BPM6 367 aa13.92□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Utp14aQ640M1 767 aaKnown RBP13.92□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Map4k4P97820 1233 aaKnown RBP13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Cavin4A2AMM0 362 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Tnnt1O88346 262 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Bag4Q8CI61 457 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Kif14L0N7N1 1674 aaKnown RBP13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 CgnP59242 1191 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Gripap1Q8VD04 806 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Babam1Q3UI43 333 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Rbm27Q5SFM8 1060 aaKnown RBP13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Plppr3Q7TPB0 716 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Antxr1Q9CZ52 562 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Atf7ipQ7TT18 1306 aa13.91□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Nsd2Q8BVE8 1365 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Kdm6bQ5NCY0 1641 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Swt1Q9DBQ9 907 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 WizO88286 1684 aaKnown RBP13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Arhgap5P97393 1501 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Fam135aQ6NS59 1506 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Rasa1E9PYG6 1038 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 CenpjQ569L8 1344 aa13.9□□□□□ -0.18
Topbp1-201ENSMUST00000035164 Smarca5Q91ZW3 1051 aaKnown RBP13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 CarsQ9ER72 831 aaKnown RBP13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Cpa2Q504N0 417 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Zkscan1Q8BGS3 561 aaKnown RBP13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Cetn4Q8K4K1 168 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Trappc8E9PWG2 1437 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Ssh2Q5SW75 1423 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Q3UPC7 1272 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Fam13bQ8K2H3 851 aa13.89□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Adcy10Q8C0T9 1614 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Isy1Q69ZQ2 285 aaKnown RBP13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Bloc1s4Q8VED2 215 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Chrna2Q91X60 512 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Shq1Q7TMX5 569 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Pdlim2Q8R1G6 349 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Filip1lQ6P6L0 1131 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Ppip5k2Q6ZQB6 1129 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Tex14Q7M6U3 1450 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 SphkapQ6NSW3 1687 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Kiaa0754Q69ZZ9 979 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Plekhm2Q80TQ5 1018 aa13.88□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Prdm16A2A935 1275 aa13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Usp19Q3UJD6 1360 aa13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 1700010I14RikQ7TPG0 532 aa13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Utp3Q9JI13 469 aaKnown RBP13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 MccE9PWI3 1003 aa13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Polr3gQ6NXY9 223 aa13.87□□□□□ -0.19
Topbp1-201ENSMUST00000035164 DroshaQ5HZJ0 1373 aaKnown RBP13.86□□□□□ -0.19
Topbp1-201ENSMUST00000035164 CastP51125 788 aa13.86□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Fez1Q8K0X8 392 aa13.86□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Sytl4Q9R0Q1 673 aa13.86□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Wdr63B2RY71 923 aa13.86□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Ccdc141E9Q8Q6 1531 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Mbd5B1AYB6 1498 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Kif4P33174 1231 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Pank2Q3U4S0 443 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Cgnl1Q6AW69 1298 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 PtmsQ9D0J8 101 aaKnown RBP13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 PalmQ9Z0P4 383 aa13.85□□□□□ -0.19
Topbp1-201ENSMUST00000035164 CatipB9EKE5 520 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Gm10093D3YYI8 482 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Dhx16G3X8X0 1044 aaKnown RBP13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Hdac1O09106 482 aaKnown RBP13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Brd1E9PZ26 1189 aaKnown RBP13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Olfml1Q8BSH2 233 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 CalcaP70160 136 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 St18Q80TY4 1045 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 4931400O07RikQ9D4M5 137 aa13.84□□□□□ -0.19
Topbp1-201ENSMUST00000035164 Map3k4O08648 1597 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gm16486A0A1D5RMD1 1434 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Trim30aP15533 496 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gadd45bP22339 160 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Q3TQI7 289 aaKnown RBP13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Kiaa1107Q80TK0 1369 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Mlh3A0A1Y7VMP7 1443 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Unc13aQ4KUS2 1712 aa13.83□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Prex2Q3LAC4 1598 aa13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Fhod3Q76LL6 1578 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 194 ms