RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W PAU9Q3E770 120 aa1.94□□□□□ -2.1
VPS27YNR006W BLM10P43583 2143 aa1.93□□□□□ -2.1
VPS27YNR006W HFA1P32874 2273 aa1.93□□□□□ -2.1
VPS27YNR006W TIM12P32830 109 aa1.93□□□□□ -2.1
VPS27YNR006W YPR145C-AQ2V2P0 78 aa1.93□□□□□ -2.1
VPS27YNR006W SEC16P48415 2195 aaKnown RBP1.93□□□□□ -2.1
VPS27YNR006W PAU1P0CE88 120 aa1.92□□□□□ -2.1
VPS27YNR006W PAU14P0CE89 120 aa1.92□□□□□ -2.1
VPS27YNR006W YIL102CP40488 101 aa1.92□□□□□ -2.1
VPS27YNR006W HHY1P39982 102 aa1.91□□□□□ -2.1
VPS27YNR006W NCE101Q02820 53 aa1.91□□□□□ -2.1
VPS27YNR006W YHR213W-AQ8TGT4 77 aa1.91□□□□□ -2.1
VPS27YNR006W RPS11AP0CX47 156 aaKnown RBP1.9□□□□□ -2.1
VPS27YNR006W RPS11BP0CX48 156 aaKnown RBP1.9□□□□□ -2.1
VPS27YNR006W TOM6P33448 61 aa1.9□□□□□ -2.1
VPS27YNR006W PAU20Q08322 120 aa1.9□□□□□ -2.1
VPS27YNR006W YPR117WQ06116 2489 aa1.9□□□□□ -2.11
VPS27YNR006W AIM19P40502 157 aa1.9□□□□□ -2.11
VPS27YNR006W YIL086CP40503 102 aa1.9□□□□□ -2.11
VPS27YNR006W CSF1Q12150 2958 aa1.89□□□□□ -2.11
VPS27YNR006W YOR343CQ12484 108 aa1.89□□□□□ -2.11
VPS27YNR006W YIL046W-AQ3E7Z4 54 aa1.89□□□□□ -2.11
VPS27YNR006W COX9P07255 59 aa1.88□□□□□ -2.11
VPS27YNR006W IRA2P19158 3079 aa1.88□□□□□ -2.11
VPS27YNR006W YHR214C-DP0CX93 97 aa1.88□□□□□ -2.11
VPS27YNR006W HUA1P40325 198 aa1.88□□□□□ -2.11
VPS27YNR006W YJR128WP47162 119 aa1.88□□□□□ -2.11
VPS27YNR006W BSC4P53841 131 aa1.88□□□□□ -2.11
VPS27YNR006W IRA1P18963 3092 aa1.87□□□□□ -2.11
VPS27YNR006W SHU1P38751 150 aa1.87□□□□□ -2.11
VPS27YNR006W TOR1P35169 2470 aa1.87□□□□□ -2.11
VPS27YNR006W MPC2P38857 129 aa1.86□□□□□ -2.11
VPS27YNR006W YDR381C-AQ3E6R5 114 aa1.86□□□□□ -2.11
VPS27YNR006W FMP27Q06179 2628 aa1.86□□□□□ -2.11
VPS27YNR006W PAU23Q07987 124 aa1.86□□□□□ -2.11
VPS27YNR006W PAU17Q12370 124 aa1.86□□□□□ -2.11
VPS27YNR006W YDR010CQ12426 110 aa1.86□□□□□ -2.11
VPS27YNR006W YDR119W-AQ2V2P9 66 aa1.86□□□□□ -2.11
VPS27YNR006W YMR007WQ03675 126 aa1.84□□□□□ -2.11
VPS27YNR006W YLR146W-AQ2V2P1 62 aa1.84□□□□□ -2.11
VPS27YNR006W YFR010W-AP0C5N0 62 aa1.84□□□□□ -2.12
VPS27YNR006W YOR192C-CQ3E736 78 aa1.84□□□□□ -2.12
VPS27YNR006W VMA9Q3E7B6 73 aa1.84□□□□□ -2.12
VPS27YNR006W YER188C-AP0C0V2 99 aa1.83□□□□□ -2.12
VPS27YNR006W YHR173CP38864 112 aa1.83□□□□□ -2.12
VPS27YNR006W SWM2P40342 146 aa1.83□□□□□ -2.12
VPS27YNR006W YMR141CP40211 102 aa1.82□□□□□ -2.12
VPS27YNR006W COA2Q3E823 68 aa1.82□□□□□ -2.12
VPS27YNR006W YHR213W-BQ8TGK1 99 aa1.82□□□□□ -2.12
VPS27YNR006W SEN1Q00416 2231 aaKnown RBP1.82□□□□□ -2.12
VPS27YNR006W TRA1P38811 3744 aa1.82□□□□□ -2.12
VPS27YNR006W FPR2P32472 135 aa1.82□□□□□ -2.12
VPS27YNR006W YOR105WQ08504 108 aa1.82□□□□□ -2.12
VPS27YNR006W YIL156W-BQ2V2P4 73 aa1.82□□□□□ -2.12
VPS27YNR006W COX19Q3E731 98 aa1.82□□□□□ -2.12
VPS27YNR006W PAI3P01094 68 aa1.81□□□□□ -2.12
VPS27YNR006W YBR292CP38357 123 aa1.81□□□□□ -2.12
VPS27YNR006W YPR108W-AQ3E7B3 70 aa1.81□□□□□ -2.12
VPS27YNR006W NOP10Q6Q547 58 aaPredicted RBP1.8□□□□□ -2.12
VPS27YNR006W YOR032W-AQ8TGS1 66 aa1.8□□□□□ -2.12
VPS27YNR006W YOR314WQ12506 109 aa1.8□□□□□ -2.12
VPS27YNR006W YBR056W-AI2HB52 66 aa1.78□□□□□ -2.12
VPS27YNR006W RPL39P04650 51 aa1.78□□□□□ -2.12
VPS27YNR006W SIP18P50263 79 aa1.78□□□□□ -2.12
VPS27YNR006W YOR034C-AQ3E735 80 aa1.77□□□□□ -2.13
VPS27YNR006W YNL042W-BQ3E7Z2 85 aa1.77□□□□□ -2.13
VPS27YNR006W SSS1P35179 80 aa1.76□□□□□ -2.13
VPS27YNR006W YKL065W-AQ2V2P2 73 aa1.76□□□□□ -2.13
VPS27YNR006W YBR201C-AQ2V2Q3 67 aa1.76□□□□□ -2.13
VPS27YNR006W YMR105W-AQ8TGS8 64 aa1.76□□□□□ -2.13
VPS27YNR006W Q0032Q9ZZX7 96 aa1.76□□□□□ -2.13
VPS27YNR006W YAL065CO13511 128 aa1.75□□□□□ -2.13
VPS27YNR006W AUA1P32450 94 aa1.75□□□□□ -2.13
VPS27YNR006W YGR121W-AQ3E816 71 aa1.75□□□□□ -2.13
VPS27YNR006W YMR122W-AQ3E842 84 aa1.75□□□□□ -2.13
VPS27YNR006W TOR2P32600 2474 aaKnown RBP1.75□□□□□ -2.13
VPS27YNR006W BPH1P25356 2167 aa1.75□□□□□ -2.13
VPS27YNR006W QCR9P22289 66 aa1.74□□□□□ -2.13
VPS27YNR006W TOM7P53507 60 aa1.74□□□□□ -2.13
VPS27YNR006W YIL134C-AQ45U18 67 aa1.74□□□□□ -2.13
VPS27YNR006W URA2P07259 2214 aaKnown RBP1.74□□□□□ -2.13
VPS27YNR006W ATX1P38636 73 aa1.73□□□□□ -2.13
VPS27YNR006W YGL258W-AQ3E740 77 aa1.73□□□□□ -2.13
VPS27YNR006W RPL37AP49166 88 aaKnown RBP1.72□□□□□ -2.13
VPS27YNR006W TEL1P38110 2787 aa1.71□□□□□ -2.14
VPS27YNR006W YDL022C-AP0C5L6 82 aa1.71□□□□□ -2.14
VPS27YNR006W YGR025WP53216 100 aa1.71□□□□□ -2.14
VPS27YNR006W RPL43AP0CX25 92 aaKnown RBP1.7□□□□□ -2.14
VPS27YNR006W RPL43BP0CX26 92 aa1.7□□□□□ -2.14
VPS27YNR006W YBR072C-AQ3E794 53 aa1.69□□□□□ -2.14
VPS27YNR006W YFL041W-AQ3E817 63 aa1.69□□□□□ -2.14
VPS27YNR006W YGR035W-AQ45U48 73 aa1.69□□□□□ -2.14
VPS27YNR006W GCN1P33892 2672 aaKnown RBP1.69□□□□□ -2.14
VPS27YNR006W CUP1-1P0CX80 61 aa1.68□□□□□ -2.14
VPS27YNR006W CUP1-2P0CX81 61 aa1.68□□□□□ -2.14
VPS27YNR006W RPC10P40422 70 aa1.67□□□□□ -2.14
VPS27YNR006W ATP18P81450 59 aa1.67□□□□□ -2.14
VPS27YNR006W Q0297Q9ZZV8 51 aa1.67□□□□□ -2.14
VPS27YNR006W SGF11Q03067 99 aa1.66□□□□□ -2.14
VPS27YNR006W PRP8P33334 2413 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms