RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C SDH6Q3E785 79 aa-0.65□□□□□ -2.51
RFX1YLR176C YMR122W-AQ3E842 84 aa-0.65□□□□□ -2.51
RFX1YLR176C FLO1P32768 1537 aa-0.65□□□□□ -2.51
RFX1YLR176C YBT1P32386 1661 aa-0.65□□□□□ -2.51
RFX1YLR176C SNQ2P32568 1501 aaKnown RBP-0.65□□□□□ -2.51
RFX1YLR176C YER137CP40083 148 aaKnown RBP-0.66□□□□□ -2.51
RFX1YLR176C GDB1Q06625 1536 aa-0.66□□□□□ -2.51
RFX1YLR176C SNU13P39990 126 aaKnown RBP-0.66□□□□□ -2.52
RFX1YLR176C FKS3Q04952 1785 aa-0.66□□□□□ -2.52
RFX1YLR176C YHR214C-DP0CX93 97 aa-0.67□□□□□ -2.52
RFX1YLR176C RGI1P40043 161 aaPredicted RBP-0.67□□□□□ -2.52
RFX1YLR176C YGR035W-AQ45U48 73 aa-0.67□□□□□ -2.52
RFX1YLR176C ARO1P08566 1588 aaKnown RBP-0.67□□□□□ -2.52
RFX1YLR176C MOT1P32333 1867 aa-0.67□□□□□ -2.52
RFX1YLR176C REV3P14284 1504 aa-0.67□□□□□ -2.52
RFX1YLR176C MMS1Q06211 1407 aa-0.67□□□□□ -2.52
RFX1YLR176C YAL065CO13511 128 aa-0.67□□□□□ -2.52
RFX1YLR176C ATP18P81450 59 aa-0.67□□□□□ -2.52
RFX1YLR176C ESP1Q03018 1630 aa-0.68□□□□□ -2.52
RFX1YLR176C TCB3Q03640 1545 aaKnown RBP-0.68□□□□□ -2.52
RFX1YLR176C ECM12O13529 151 aa-0.68□□□□□ -2.52
RFX1YLR176C YDR119W-AQ2V2P9 66 aa-0.68□□□□□ -2.52
RFX1YLR176C APC1P53886 1748 aa-0.68□□□□□ -2.52
RFX1YLR176C DNF1P32660 1571 aa-0.68□□□□□ -2.52
RFX1YLR176C GEA2P39993 1459 aaKnown RBP-0.68□□□□□ -2.52
RFX1YLR176C LTE1P07866 1435 aa-0.68□□□□□ -2.52
RFX1YLR176C YKL018C-AQ3E7A7 99 aa-0.68□□□□□ -2.52
RFX1YLR176C CDC25P04821 1589 aa-0.69□□□□□ -2.52
RFX1YLR176C PDR5P33302 1511 aaKnown RBP-0.69□□□□□ -2.52
RFX1YLR176C TY3B-GQ99315 1547 aa-0.69□□□□□ -2.52
RFX1YLR176C IML1P47170 1584 aa-0.69□□□□□ -2.52
RFX1YLR176C PDR12Q02785 1511 aa-0.69□□□□□ -2.52
RFX1YLR176C VPS15P22219 1454 aa-0.69□□□□□ -2.52
RFX1YLR176C EDC1P53080 175 aaPredicted RBP-0.69□□□□□ -2.52
RFX1YLR176C GCN2P15442 1659 aa-0.7□□□□□ -2.52
RFX1YLR176C YHR073W-AP0C5N7 58 aa-0.7□□□□□ -2.52
RFX1YLR176C YDR524C-BQ3E6R4 66 aa-0.7□□□□□ -2.52
RFX1YLR176C YDR029WQ12111 104 aa-0.7□□□□□ -2.52
RFX1YLR176C YOR008C-AQ3E7B9 74 aa-0.7□□□□□ -2.52
RFX1YLR176C RRP5Q05022 1729 aaKnown RBP-0.71□□□□□ -2.52
RFX1YLR176C SWR1Q05471 1514 aa-0.71□□□□□ -2.52
RFX1YLR176C POL1P13382 1468 aa-0.71□□□□□ -2.52
RFX1YLR176C MDS3P53094 1487 aa-0.71□□□□□ -2.52
RFX1YLR176C IQG1Q12280 1495 aa-0.71□□□□□ -2.52
RFX1YLR176C YGL258W-AQ3E740 77 aa-0.72□□□□□ -2.52
RFX1YLR176C NUP188P52593 1655 aaKnown RBP-0.72□□□□□ -2.52
RFX1YLR176C YCF1P39109 1515 aaKnown RBP-0.72□□□□□ -2.52
RFX1YLR176C STU1P38198 1513 aa-0.72□□□□□ -2.52
RFX1YLR176C SKI3P17883 1432 aaKnown RBP-0.73□□□□□ -2.53
RFX1YLR176C YCR085WP25650 117 aa-0.73□□□□□ -2.53
RFX1YLR176C RKR1Q04781 1562 aa-0.73□□□□□ -2.53
RFX1YLR176C NHP2P32495 156 aaPredicted RBP-0.74□□□□□ -2.53
RFX1YLR176C YDR182W-AQ3E796 67 aa-0.74□□□□□ -2.53
RFX1YLR176C YPR108W-AQ3E7B3 70 aa-0.74□□□□□ -2.53
RFX1YLR176C CHC1P22137 1653 aaKnown RBP-0.74□□□□□ -2.53
RFX1YLR176C MLP1Q02455 1875 aaKnown RBP-0.74□□□□□ -2.53
RFX1YLR176C MSL1P40567 111 aaPredicted RBP-0.74□□□□□ -2.53
RFX1YLR176C FPR2P32472 135 aa-0.75□□□□□ -2.53
RFX1YLR176C YBR032WP38223 100 aa-0.75□□□□□ -2.53
RFX1YLR176C SPT6P23615 1451 aaKnown RBP-0.75□□□□□ -2.53
RFX1YLR176C VTH1P40438 1549 aa-0.75□□□□□ -2.53
RFX1YLR176C VTH2P40890 1549 aa-0.75□□□□□ -2.53
RFX1YLR176C YDR034C-AP0C289 58 aa-0.75□□□□□ -2.53
RFX1YLR176C YDR042CQ03205 200 aa-0.75□□□□□ -2.53
RFX1YLR176C YLL066W-BQ8TGJ7 56 aa-0.75□□□□□ -2.53
RFX1YLR176C RPL29P05747 59 aaPredicted RBP-0.76□□□□□ -2.53
RFX1YLR176C MHF2Q3E829 80 aa-0.76□□□□□ -2.53
RFX1YLR176C Q0297Q9ZZV8 51 aa-0.76□□□□□ -2.53
RFX1YLR176C PAU23Q07987 124 aa-0.76□□□□□ -2.53
RFX1YLR176C PAU17Q12370 124 aa-0.76□□□□□ -2.53
RFX1YLR176C YDR034W-BQ6Q5X2 51 aa-0.76□□□□□ -2.53
RFX1YLR176C SUS1Q6WNK7 96 aa-0.76□□□□□ -2.53
RFX1YLR176C NUP159P40477 1460 aa-0.76□□□□□ -2.53
RFX1YLR176C PDR15Q04182 1529 aaKnown RBP-0.76□□□□□ -2.53
RFX1YLR176C SMC4Q12267 1418 aa-0.77□□□□□ -2.53
RFX1YLR176C BUD3P25558 1636 aa-0.77□□□□□ -2.53
RFX1YLR176C UFD4P33202 1483 aa-0.77□□□□□ -2.53
RFX1YLR176C UTP10P42945 1769 aaKnown RBP-0.77□□□□□ -2.53
RFX1YLR176C SCC2Q04002 1493 aa-0.77□□□□□ -2.53
RFX1YLR176C TOS6P48560 102 aa-0.77□□□□□ -2.53
RFX1YLR176C YLL006W-AQ3E814 58 aa-0.77□□□□□ -2.53
RFX1YLR176C MON2P48563 1636 aaPredicted RBP-0.78□□□□□ -2.53
RFX1YLR176C ESC1Q03661 1658 aaKnown RBP-0.78□□□□□ -2.54
RFX1YLR176C MMS22Q06164 1454 aa-0.79□□□□□ -2.54
RFX1YLR176C KOG1P38873 1557 aa-0.79□□□□□ -2.54
RFX1YLR176C DOP1Q03921 1698 aa-0.79□□□□□ -2.54
RFX1YLR176C ATP17Q06405 101 aa-0.79□□□□□ -2.54
RFX1YLR176C YOL097W-AQ3E7Y9 61 aa-0.79□□□□□ -2.54
RFX1YLR176C YIL046W-AQ3E7Z4 54 aa-0.79□□□□□ -2.54
RFX1YLR176C SIP18P50263 79 aa-0.8□□□□□ -2.54
RFX1YLR176C PEP1P32319 1579 aa-0.8□□□□□ -2.54
RFX1YLR176C YPR010C-AA5Z2X5 72 aa-0.8□□□□□ -2.54
RFX1YLR176C SCP1Q08873 200 aa-0.8□□□□□ -2.54
RFX1YLR176C FYV7Q12247 151 aa-0.8□□□□□ -2.54
RFX1YLR176C YKL068W-AQ3E826 78 aa-0.8□□□□□ -2.54
RFX1YLR176C HIR3P47171 1648 aa-0.81□□□□□ -2.54
RFX1YLR176C TIM12P32830 109 aa-0.81□□□□□ -2.54
RFX1YLR176C NOP10Q6Q547 58 aaPredicted RBP-0.81□□□□□ -2.54
RFX1YLR176C VMR1P38735 1592 aa-0.81□□□□□ -2.54
RFX1YLR176C POC4Q12245 148 aaPredicted RBP-0.81□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms