RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W YOR394C-AQ8TGJ0 55 aa-1.7□□□□□ -2.68
APQ12YIL040W YDR042CQ03205 200 aa-1.71□□□□□ -2.68
APQ12YIL040W RPL29P05747 59 aaPredicted RBP-1.72□□□□□ -2.68
APQ12YIL040W SWC7Q06707 132 aa-1.72□□□□□ -2.68
APQ12YIL040W YPL225WQ08971 146 aaKnown RBP-1.72□□□□□ -2.68
APQ12YIL040W YLR146W-AQ2V2P1 62 aa-1.72□□□□□ -2.68
APQ12YIL040W YLR099W-AQ3E798 87 aa-1.72□□□□□ -2.68
APQ12YIL040W YOS1Q3E834 85 aa-1.72□□□□□ -2.68
APQ12YIL040W KRE5P22023 1365 aa-1.72□□□□□ -2.69
APQ12YIL040W SPC1P46965 94 aa-1.73□□□□□ -2.69
APQ12YIL040W TLG1Q03322 224 aa-1.73□□□□□ -2.69
APQ12YIL040W BPT1P14772 1559 aa-1.73□□□□□ -2.69
APQ12YIL040W XRN1P22147 1528 aaKnown RBP-1.74□□□□□ -2.69
APQ12YIL040W LHP1P33399 275 aaKnown RBP-1.74□□□□□ -2.69
APQ12YIL040W YMR103CQ04436 120 aa-1.74□□□□□ -2.69
APQ12YIL040W HAP1P0CE41 1502 aa-1.75□□□□□ -2.69
APQ12YIL040W DNF2Q12675 1612 aa-1.75□□□□□ -2.69
APQ12YIL040W YDR034C-AP0C289 58 aa-1.75□□□□□ -2.69
APQ12YIL040W FPR2P32472 135 aa-1.75□□□□□ -2.69
APQ12YIL040W SPC2Q04969 178 aa-1.75□□□□□ -2.69
APQ12YIL040W YBR200W-AQ3E755 54 aa-1.75□□□□□ -2.69
APQ12YIL040W ULS1Q08562 1619 aa-1.76□□□□□ -2.69
APQ12YIL040W NHP2P32495 156 aaPredicted RBP-1.76□□□□□ -2.69
APQ12YIL040W POL1P13382 1468 aa-1.76□□□□□ -2.69
APQ12YIL040W YHR073W-AP0C5N7 58 aa-1.77□□□□□ -2.69
APQ12YIL040W PAU23Q07987 124 aa-1.77□□□□□ -2.69
APQ12YIL040W PAU17Q12370 124 aa-1.77□□□□□ -2.69
APQ12YIL040W YOR011W-AQ3E807 68 aa-1.77□□□□□ -2.69
APQ12YIL040W DNF1P32660 1571 aa-1.77□□□□□ -2.69
APQ12YIL040W RPA190P10964 1664 aaKnown RBP-1.77□□□□□ -2.69
APQ12YIL040W VMA7P39111 118 aa-1.78□□□□□ -2.69
APQ12YIL040W DYN2Q02647 92 aa-1.78□□□□□ -2.69
APQ12YIL040W FYV7Q12247 151 aa-1.78□□□□□ -2.69
APQ12YIL040W BCK1Q01389 1478 aa-1.78□□□□□ -2.69
APQ12YIL040W ESP1Q03018 1630 aa-1.78□□□□□ -2.69
APQ12YIL040W TY1B-DR4Q07793 1604 aa-1.78□□□□□ -2.69
APQ12YIL040W YBL039W-BP0C268 59 aa-1.79□□□□□ -2.7
APQ12YIL040W YMR082CQ04276 118 aa-1.79□□□□□ -2.7
APQ12YIL040W YKL068W-AQ3E826 78 aa-1.79□□□□□ -2.7
APQ12YIL040W GNA1P43577 159 aaPredicted RBP-1.8□□□□□ -2.7
APQ12YIL040W YSP2Q06681 1438 aa-1.81□□□□□ -2.7
APQ12YIL040W RPS30AP0CX33 63 aaKnown RBP-1.81□□□□□ -2.7
APQ12YIL040W RPS30BP0CX34 63 aaKnown RBP-1.81□□□□□ -2.7
APQ12YIL040W SPI1P40092 148 aa-1.82□□□□□ -2.7
APQ12YIL040W YBR230W-AQ3E762 66 aa-1.82□□□□□ -2.7
APQ12YIL040W NOP10Q6Q547 58 aaPredicted RBP-1.82□□□□□ -2.7
APQ12YIL040W FLO1P32768 1537 aa-1.82□□□□□ -2.7
APQ12YIL040W GCN2P15442 1659 aa-1.83□□□□□ -2.7
APQ12YIL040W TIM12P32830 109 aa-1.83□□□□□ -2.7
APQ12YIL040W SNU13P39990 126 aaKnown RBP-1.83□□□□□ -2.7
APQ12YIL040W RSM19P53733 91 aaPredicted RBP-1.83□□□□□ -2.7
APQ12YIL040W SSK2P53599 1579 aa-1.84□□□□□ -2.7
APQ12YIL040W YIL156W-BQ2V2P4 73 aa-1.84□□□□□ -2.7
APQ12YIL040W WIP1Q2V2P8 89 aa-1.84□□□□□ -2.7
APQ12YIL040W SNQ2P32568 1501 aaKnown RBP-1.85□□□□□ -2.71
APQ12YIL040W MLP1Q02455 1875 aaKnown RBP-1.85□□□□□ -2.71
APQ12YIL040W PDR11P40550 1411 aa-1.85□□□□□ -2.71
APQ12YIL040W YOR093CQ12275 1648 aa-1.86□□□□□ -2.71
APQ12YIL040W YDL022C-AP0C5L6 82 aa-1.86□□□□□ -2.71
APQ12YIL040W YGL194C-AQ2V2P6 80 aa-1.86□□□□□ -2.71
APQ12YIL040W YOR316C-AQ3E806 69 aa-1.87□□□□□ -2.71
APQ12YIL040W YOR314WQ12506 109 aa-1.88□□□□□ -2.71
APQ12YIL040W MHF2Q3E829 80 aa-1.88□□□□□ -2.71
APQ12YIL040W ESC1Q03661 1658 aaKnown RBP-1.89□□□□□ -2.71
APQ12YIL040W SIN3P22579 1536 aa-1.89□□□□□ -2.71
APQ12YIL040W SWM2P40342 146 aa-1.89□□□□□ -2.71
APQ12YIL040W HMRA1P0CY11 126 aa-1.9□□□□□ -2.71
APQ12YIL040W HUB1Q6Q546 73 aa-1.9□□□□□ -2.71
APQ12YIL040W YCF1P39109 1515 aaKnown RBP-1.91□□□□□ -2.71
APQ12YIL040W YMR090WQ04304 227 aaKnown RBP-1.91□□□□□ -2.72
APQ12YIL040W YOR105WQ08504 108 aa-1.91□□□□□ -2.72
APQ12YIL040W PDR5P33302 1511 aaKnown RBP-1.91□□□□□ -2.72
APQ12YIL040W PDR15Q04182 1529 aaKnown RBP-1.91□□□□□ -2.72
APQ12YIL040W YER039C-AP0CD97 72 aa-1.92□□□□□ -2.72
APQ12YIL040W YOR032W-AQ8TGS1 66 aa-1.92□□□□□ -2.72
APQ12YIL040W RRP5Q05022 1729 aaKnown RBP-1.92□□□□□ -2.72
APQ12YIL040W PDR12Q02785 1511 aa-1.92□□□□□ -2.72
APQ12YIL040W QCR6P00127 147 aa-1.93□□□□□ -2.72
APQ12YIL040W YKL065W-AQ2V2P2 73 aa-1.93□□□□□ -2.72
APQ12YIL040W RPO31P04051 1460 aa-1.94□□□□□ -2.72
APQ12YIL040W RRT15Q3E811 62 aa-1.94□□□□□ -2.72
APQ12YIL040W DOP1Q03921 1698 aa-1.95□□□□□ -2.72
APQ12YIL040W SSS1P35179 80 aa-1.95□□□□□ -2.72
APQ12YIL040W YJL133C-AQ3E7A3 74 aa-1.95□□□□□ -2.72
APQ12YIL040W KSH1Q8TGJ3 72 aa-1.95□□□□□ -2.72
APQ12YIL040W SPP41P38904 1435 aa-1.95□□□□□ -2.72
APQ12YIL040W YLR157W-DP0CE99 70 aa-1.97□□□□□ -2.72
APQ12YIL040W GDB1Q06625 1536 aa-1.97□□□□□ -2.73
APQ12YIL040W NUP188P52593 1655 aaKnown RBP-1.98□□□□□ -2.73
APQ12YIL040W MDS3P53094 1487 aa-1.98□□□□□ -2.73
APQ12YIL040W PAU7P39545 55 aa-2□□□□□ -2.73
APQ12YIL040W SUS1Q6WNK7 96 aa-2□□□□□ -2.73
APQ12YIL040W ARO1P08566 1588 aaKnown RBP-2.01□□□□□ -2.73
APQ12YIL040W QCR9P22289 66 aa-2.01□□□□□ -2.73
APQ12YIL040W SWR1Q05471 1514 aa-2.01□□□□□ -2.73
APQ12YIL040W CDC25P04821 1589 aa-2.02□□□□□ -2.73
APQ12YIL040W YGR035W-AQ45U48 73 aa-2.02□□□□□ -2.73
APQ12YIL040W IQG1Q12280 1495 aa-2.02□□□□□ -2.73
APQ12YIL040W MSL1P40567 111 aaPredicted RBP-2.03□□□□□ -2.73
APQ12YIL040W YGR121W-AQ3E816 71 aa-2.03□□□□□ -2.73
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms