RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W TY2B-DR1Q12472 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-BQ12491 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-OR2Q12501 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W YDL022C-AP0C5L6 82 aa-0.47□□□□□ -2.48
LCD1YDR499W YDR182W-AQ3E796 67 aa-0.47□□□□□ -2.48
LCD1YDR499W RPS27AP35997 82 aaKnown RBP-0.49□□□□□ -2.49
LCD1YDR499W YKL065W-AQ2V2P2 73 aa-0.49□□□□□ -2.49
LCD1YDR499W YKL018C-AQ3E7A7 99 aa-0.49□□□□□ -2.49
LCD1YDR499W SMC4Q12267 1418 aa-0.5□□□□□ -2.49
LCD1YDR499W YPR145C-AQ2V2P0 78 aa-0.5□□□□□ -2.49
LCD1YDR499W APC1P53886 1748 aa-0.5□□□□□ -2.49
LCD1YDR499W YOR008C-AQ3E7B9 74 aa-0.5□□□□□ -2.49
LCD1YDR499W SIN3P22579 1536 aa-0.51□□□□□ -2.49
LCD1YDR499W SIP18P50263 79 aa-0.51□□□□□ -2.49
LCD1YDR499W YOR314WQ12506 109 aa-0.51□□□□□ -2.49
LCD1YDR499W YGL194C-AQ2V2P6 80 aa-0.51□□□□□ -2.49
LCD1YDR499W VTH1P40438 1549 aa-0.51□□□□□ -2.49
LCD1YDR499W VTH2P40890 1549 aa-0.51□□□□□ -2.49
LCD1YDR499W POC4Q12245 148 aaPredicted RBP-0.52□□□□□ -2.49
LCD1YDR499W OLI1P61829 76 aa-0.52□□□□□ -2.49
LCD1YDR499W IRC20Q06554 1556 aa-0.52□□□□□ -2.49
LCD1YDR499W YLR146W-AQ2V2P1 62 aa-0.53□□□□□ -2.49
LCD1YDR499W LSM2P38203 95 aaKnown RBP-0.53□□□□□ -2.49
LCD1YDR499W TY1B-NL2Q99337 1749 aaKnown RBP-0.53□□□□□ -2.49
LCD1YDR499W YSP2Q06681 1438 aa-0.54□□□□□ -2.5
LCD1YDR499W CWP2P43497 92 aa-0.54□□□□□ -2.5
LCD1YDR499W SPO14P36126 1683 aa-0.54□□□□□ -2.5
LCD1YDR499W LTE1P07866 1435 aa-0.54□□□□□ -2.5
LCD1YDR499W TOS6P48560 102 aa-0.54□□□□□ -2.5
LCD1YDR499W ATP17Q06405 101 aa-0.54□□□□□ -2.5
LCD1YDR499W MMS22Q06164 1454 aa-0.55□□□□□ -2.5
LCD1YDR499W YOR394C-AQ8TGJ0 55 aa-0.56□□□□□ -2.5
LCD1YDR499W YBR200W-AQ3E755 54 aa-0.56□□□□□ -2.5
LCD1YDR499W YGR121W-AQ3E816 71 aa-0.56□□□□□ -2.5
LCD1YDR499W QCR9P22289 66 aa-0.57□□□□□ -2.5
LCD1YDR499W ESC1Q03661 1658 aaKnown RBP-0.57□□□□□ -2.5
LCD1YDR499W YPR117WQ06116 2489 aa-0.57□□□□□ -2.5
LCD1YDR499W MLP1Q02455 1875 aaKnown RBP-0.57□□□□□ -2.5
LCD1YDR499W FMP27Q06179 2628 aa-0.58□□□□□ -2.5
LCD1YDR499W SWM2P40342 146 aa-0.58□□□□□ -2.5
LCD1YDR499W KOG1P38873 1557 aa-0.58□□□□□ -2.5
LCD1YDR499W YOR032W-AQ8TGS1 66 aa-0.58□□□□□ -2.5
LCD1YDR499W YOR011W-AQ3E807 68 aa-0.59□□□□□ -2.5
LCD1YDR499W YBL039W-BP0C268 59 aa-0.6□□□□□ -2.5
LCD1YDR499W YGR035W-AQ45U48 73 aa-0.6□□□□□ -2.5
LCD1YDR499W TOR2P32600 2474 aaKnown RBP-0.61□□□□□ -2.51
LCD1YDR499W RPO21P04050 1733 aaKnown RBP-0.61□□□□□ -2.51
LCD1YDR499W TY3B-GQ99315 1547 aa-0.62□□□□□ -2.51
LCD1YDR499W ESP1Q03018 1630 aa-0.63□□□□□ -2.51
LCD1YDR499W PAU7P39545 55 aa-0.64□□□□□ -2.51
LCD1YDR499W TIM12P32830 109 aa-0.64□□□□□ -2.51
LCD1YDR499W HAP1P0CE41 1502 aa-0.64□□□□□ -2.51
LCD1YDR499W MEC1P38111 2368 aa-0.65□□□□□ -2.51
LCD1YDR499W SSS1P35179 80 aa-0.65□□□□□ -2.51
LCD1YDR499W TEL1P38110 2787 aa-0.65□□□□□ -2.51
LCD1YDR499W NUM1Q00402 2748 aa-0.65□□□□□ -2.51
LCD1YDR499W RPS27BP38711 82 aa-0.68□□□□□ -2.52
LCD1YDR499W YHR050W-AQ05451 56 aa-0.68□□□□□ -2.52
LCD1YDR499W YDR119W-AQ2V2P9 66 aa-0.68□□□□□ -2.52
LCD1YDR499W GCN1P33892 2672 aaKnown RBP-0.68□□□□□ -2.52
LCD1YDR499W DYN1P36022 4092 aa-0.68□□□□□ -2.52
LCD1YDR499W HUB1Q6Q546 73 aa-0.69□□□□□ -2.52
LCD1YDR499W FKS3Q04952 1785 aa-0.7□□□□□ -2.52
LCD1YDR499W YLL006W-AQ3E814 58 aa-0.7□□□□□ -2.52
LCD1YDR499W ERI1P62651 68 aaKnown RBP-0.71□□□□□ -2.52
LCD1YDR499W YDR524C-BQ3E6R4 66 aa-0.72□□□□□ -2.52
LCD1YDR499W COA2Q3E823 68 aa-0.72□□□□□ -2.53
LCD1YDR499W ARO1P08566 1588 aaKnown RBP-0.72□□□□□ -2.53
LCD1YDR499W YGR146C-AQ8TGT9 53 aa-0.73□□□□□ -2.53
LCD1YDR499W SPI1P40092 148 aa-0.73□□□□□ -2.53
LCD1YDR499W YGL258W-AQ3E740 77 aa-0.74□□□□□ -2.53
LCD1YDR499W UFD4P33202 1483 aa-0.75□□□□□ -2.53
LCD1YDR499W YBR230W-AQ3E762 66 aa-0.76□□□□□ -2.53
LCD1YDR499W DNF2Q12675 1612 aa-0.76□□□□□ -2.53
LCD1YDR499W RPS30AP0CX33 63 aaKnown RBP-0.77□□□□□ -2.53
LCD1YDR499W RPS30BP0CX34 63 aaKnown RBP-0.77□□□□□ -2.53
LCD1YDR499W YHR213W-AQ8TGT4 77 aa-0.78□□□□□ -2.53
LCD1YDR499W IQG1Q12280 1495 aa-0.78□□□□□ -2.53
LCD1YDR499W VPS15P22219 1454 aa-0.79□□□□□ -2.54
LCD1YDR499W IML1P47170 1584 aa-0.79□□□□□ -2.54
LCD1YDR499W DOP1Q03921 1698 aa-0.79□□□□□ -2.54
LCD1YDR499W SKI3P17883 1432 aaKnown RBP-0.79□□□□□ -2.54
LCD1YDR499W RRP5Q05022 1729 aaKnown RBP-0.8□□□□□ -2.54
LCD1YDR499W YFL041W-AQ3E817 63 aa-0.81□□□□□ -2.54
LCD1YDR499W YOR072W-BQ3E832 53 aa-0.81□□□□□ -2.54
LCD1YDR499W CSF1Q12150 2958 aa-0.82□□□□□ -2.54
LCD1YDR499W YLR157W-DP0CE99 70 aa-0.82□□□□□ -2.54
LCD1YDR499W YOL131WQ08270 108 aa-0.82□□□□□ -2.54
LCD1YDR499W NUP159P40477 1460 aa-0.83□□□□□ -2.54
LCD1YDR499W YSY6P38374 65 aa-0.84□□□□□ -2.54
LCD1YDR499W PDR12Q02785 1511 aa-0.84□□□□□ -2.54
LCD1YDR499W BCK1Q01389 1478 aa-0.86□□□□□ -2.55
LCD1YDR499W YOL166W-AQ8TGJ1 51 aa-0.87□□□□□ -2.55
LCD1YDR499W PDR15Q04182 1529 aaKnown RBP-0.87□□□□□ -2.55
LCD1YDR499W RPO31P04051 1460 aa-0.87□□□□□ -2.55
LCD1YDR499W PAI3P01094 68 aa-0.88□□□□□ -2.55
LCD1YDR499W VMR1P38735 1592 aa-0.88□□□□□ -2.55
LCD1YDR499W DNF1P32660 1571 aa-0.9□□□□□ -2.55
LCD1YDR499W SCC2Q04002 1493 aa-0.9□□□□□ -2.55
LCD1YDR499W SNQ2P32568 1501 aaKnown RBP-0.92□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms