RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C TY2B-FP0CX63 1770 aa2.69□□□□□ -1.98
VPS72YDR485C TY2B-GR2P0CX64 1770 aa2.69□□□□□ -1.98
VPS72YDR485C TY2B-DR2Q03494 1770 aa2.69□□□□□ -1.98
VPS72YDR485C TY2B-OR1Q12113 1770 aa2.69□□□□□ -1.98
VPS72YDR485C TY2B-BQ12491 1770 aa2.69□□□□□ -1.98
VPS72YDR485C TY2B-OR2Q12501 1770 aa2.69□□□□□ -1.98
VPS72YDR485C RPC10P40422 70 aa2.68□□□□□ -1.98
VPS72YDR485C TY1B-DR4Q07793 1604 aa2.68□□□□□ -1.98
VPS72YDR485C FKS3Q04952 1785 aa2.68□□□□□ -1.98
VPS72YDR485C YNL190WP53872 204 aa2.67□□□□□ -1.98
VPS72YDR485C YDR246W-AQ3E763 66 aa2.67□□□□□ -1.98
VPS72YDR485C SPI1P40092 148 aa2.66□□□□□ -1.98
VPS72YDR485C VMA9Q3E7B6 73 aa2.66□□□□□ -1.98
VPS72YDR485C TY2B-DR3Q07791 1770 aaKnown RBP2.66□□□□□ -1.98
VPS72YDR485C PAU7P39545 55 aa2.66□□□□□ -1.98
VPS72YDR485C COX7P10174 60 aa2.65□□□□□ -1.98
VPS72YDR485C SMC4Q12267 1418 aa2.65□□□□□ -1.98
VPS72YDR485C YIL102C-AQ2V2P5 75 aa2.64□□□□□ -1.99
VPS72YDR485C YBR072C-AQ3E794 53 aa2.63□□□□□ -1.99
VPS72YDR485C PDR12Q02785 1511 aa2.62□□□□□ -1.99
VPS72YDR485C YSY6P38374 65 aa2.62□□□□□ -1.99
VPS72YDR485C IQG1Q12280 1495 aa2.6□□□□□ -1.99
VPS72YDR485C RPL43AP0CX25 92 aaKnown RBP2.6□□□□□ -1.99
VPS72YDR485C RPL43BP0CX26 92 aa2.6□□□□□ -1.99
VPS72YDR485C RPL37AP49166 88 aaKnown RBP2.59□□□□□ -2
VPS72YDR485C SDH6Q3E785 79 aa2.59□□□□□ -2
VPS72YDR485C DNF2Q12675 1612 aa2.59□□□□□ -2
VPS72YDR485C ATP17Q06405 101 aa2.58□□□□□ -2
VPS72YDR485C YJR107C-AP0CT86 78 aa2.57□□□□□ -2
VPS72YDR485C IML1P47170 1584 aa2.56□□□□□ -2
VPS72YDR485C RPL38P49167 78 aaKnown RBP2.55□□□□□ -2
VPS72YDR485C YPR108W-AQ3E7B3 70 aa2.55□□□□□ -2
VPS72YDR485C RIM15P43565 1770 aa2.55□□□□□ -2
VPS72YDR485C YOL097W-AQ3E7Y9 61 aa2.53□□□□□ -2
VPS72YDR485C ARO1P08566 1588 aaKnown RBP2.52□□□□□ -2.01
VPS72YDR485C YLR307C-AQ3E825 87 aa2.52□□□□□ -2.01
VPS72YDR485C APC1P53886 1748 aa2.52□□□□□ -2.01
VPS72YDR485C YLR157W-EP0CF00 54 aa2.51□□□□□ -2.01
VPS72YDR485C RPS30AP0CX33 63 aaKnown RBP2.49□□□□□ -2.01
VPS72YDR485C RPS30BP0CX34 63 aaKnown RBP2.49□□□□□ -2.01
VPS72YDR485C EDC1P53080 175 aaPredicted RBP2.49□□□□□ -2.01
VPS72YDR485C MON2P48563 1636 aaPredicted RBP2.49□□□□□ -2.01
VPS72YDR485C TY3B-GQ99315 1547 aa2.46□□□□□ -2.01
VPS72YDR485C YOL164W-AQ3E7A5 60 aa2.45□□□□□ -2.02
VPS72YDR485C HAP1P0CE41 1502 aa2.45□□□□□ -2.02
VPS72YDR485C YLR146W-AQ2V2P1 62 aa2.43□□□□□ -2.02
VPS72YDR485C YDR182W-AQ3E796 67 aa2.41□□□□□ -2.02
VPS72YDR485C PDR5P33302 1511 aaKnown RBP2.41□□□□□ -2.02
VPS72YDR485C CDC25P04821 1589 aa2.41□□□□□ -2.02
VPS72YDR485C RPO21P04050 1733 aaKnown RBP2.4□□□□□ -2.03
VPS72YDR485C HKR1P41809 1802 aa2.4□□□□□ -2.03
VPS72YDR485C SPT6P23615 1451 aaKnown RBP2.39□□□□□ -2.03
VPS72YDR485C YBR032WP38223 100 aa2.39□□□□□ -2.03
VPS72YDR485C HUB1Q6Q546 73 aa2.39□□□□□ -2.03
VPS72YDR485C YCF1P39109 1515 aaKnown RBP2.39□□□□□ -2.03
VPS72YDR485C SNQ2P32568 1501 aaKnown RBP2.38□□□□□ -2.03
VPS72YDR485C MMS1Q06211 1407 aa2.38□□□□□ -2.03
VPS72YDR485C SPO14P36126 1683 aa2.37□□□□□ -2.03
VPS72YDR485C SNF2P22082 1703 aa2.36□□□□□ -2.03
VPS72YDR485C PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
VPS72YDR485C YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
VPS72YDR485C VTH1P40438 1549 aa2.35□□□□□ -2.03
VPS72YDR485C VTH2P40890 1549 aa2.35□□□□□ -2.03
VPS72YDR485C YOR192C-CQ3E736 78 aa2.35□□□□□ -2.03
VPS72YDR485C YBL039W-BP0C268 59 aa2.34□□□□□ -2.03
VPS72YDR485C BCK1Q01389 1478 aa2.34□□□□□ -2.04
VPS72YDR485C RPL37BP51402 88 aaKnown RBP2.34□□□□□ -2.04
VPS72YDR485C YBR200W-AQ3E755 54 aa2.33□□□□□ -2.04
VPS72YDR485C YKL023C-AQ2V2P3 75 aa2.29□□□□□ -2.04
VPS72YDR485C KOG1P38873 1557 aa2.28□□□□□ -2.04
VPS72YDR485C SEN1Q00416 2231 aaKnown RBP2.27□□□□□ -2.05
VPS72YDR485C VMR1P38735 1592 aa2.25□□□□□ -2.05
VPS72YDR485C RPS27AP35997 82 aaKnown RBP2.24□□□□□ -2.05
VPS72YDR485C YBT1P32386 1661 aa2.24□□□□□ -2.05
VPS72YDR485C YFR009W-AP0C5M9 85 aa2.24□□□□□ -2.05
VPS72YDR485C YOR093CQ12275 1648 aa2.23□□□□□ -2.05
VPS72YDR485C YBR016WP38216 128 aa2.23□□□□□ -2.05
VPS72YDR485C YOR011W-AQ3E807 68 aa2.23□□□□□ -2.05
VPS72YDR485C YMR001C-AQ8TGS9 76 aa2.22□□□□□ -2.05
VPS72YDR485C YOR394C-AQ8TGJ0 55 aa2.22□□□□□ -2.05
VPS72YDR485C PDR15Q04182 1529 aaKnown RBP2.21□□□□□ -2.06
VPS72YDR485C YLR157W-DP0CE99 70 aa2.19□□□□□ -2.06
VPS72YDR485C IRC20Q06554 1556 aa2.16□□□□□ -2.06
VPS72YDR485C PEP1P32319 1579 aa2.15□□□□□ -2.07
VPS72YDR485C OLI1P61829 76 aa2.11□□□□□ -2.07
VPS72YDR485C SSK2P53599 1579 aa2.11□□□□□ -2.07
VPS72YDR485C NUP188P52593 1655 aaKnown RBP2.09□□□□□ -2.07
VPS72YDR485C ULS1Q08562 1619 aa2.08□□□□□ -2.08
VPS72YDR485C YBL044WP38194 122 aa2.06□□□□□ -2.08
VPS72YDR485C USO1P25386 1790 aa2.03□□□□□ -2.08
VPS72YDR485C THO2P53552 1597 aaKnown RBP1.99□□□□□ -2.09
VPS72YDR485C YGR025WP53216 100 aa1.98□□□□□ -2.09
VPS72YDR485C RPS27BP38711 82 aa1.96□□□□□ -2.09
VPS72YDR485C SIP18P50263 79 aa1.96□□□□□ -2.1
VPS72YDR485C RPS29BP41058 56 aaKnown RBP1.93□□□□□ -2.1
VPS72YDR485C TAO3P40468 2376 aa1.92□□□□□ -2.1
VPS72YDR485C NUP192P47054 1683 aa1.9□□□□□ -2.11
VPS72YDR485C HIR3P47171 1648 aa1.9□□□□□ -2.11
VPS72YDR485C YBR230W-AQ3E762 66 aa1.9□□□□□ -2.11
VPS72YDR485C YCR108CQ3E819 63 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms