RNA–Protein interactions for RNA: YCR040W

MATALPHA1, Transcript of Transcriptional co-activator that regulates mating-type-specific genes, yeastyeast

Gene MATALPHA1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA1YCR040W TY2B-CP25384 1770 aa1.58□□□□□ -2.16
MATALPHA1YCR040W TY2B-DR1Q12472 1770 aa1.58□□□□□ -2.16
MATALPHA1YCR040W HKR1P41809 1802 aa1.58□□□□□ -2.16
MATALPHA1YCR040W DOP1Q03921 1698 aa1.58□□□□□ -2.16
MATALPHA1YCR040W PAU7P39545 55 aa1.57□□□□□ -2.16
MATALPHA1YCR040W UFD4P33202 1483 aa1.56□□□□□ -2.16
MATALPHA1YCR040W TY1B-JR1P47098 1755 aa1.56□□□□□ -2.16
MATALPHA1YCR040W TY1B-ML2Q03434 1755 aaKnown RBP1.56□□□□□ -2.16
MATALPHA1YCR040W TY1B-ER1Q03612 1755 aa1.56□□□□□ -2.16
MATALPHA1YCR040W TY1B-OLQ12273 1755 aa1.56□□□□□ -2.16
MATALPHA1YCR040W YFL041W-AQ3E817 63 aa1.54□□□□□ -2.16
MATALPHA1YCR040W APC1P53886 1748 aa1.54□□□□□ -2.16
MATALPHA1YCR040W SSS1P35179 80 aa1.49□□□□□ -2.17
MATALPHA1YCR040W SPI1P40092 148 aa1.48□□□□□ -2.17
MATALPHA1YCR040W YLR146W-AQ2V2P1 62 aa1.48□□□□□ -2.17
MATALPHA1YCR040W YKL018C-AQ3E7A7 99 aa1.48□□□□□ -2.17
MATALPHA1YCR040W YOR032W-AQ8TGS1 66 aa1.48□□□□□ -2.17
MATALPHA1YCR040W SCC2Q04002 1493 aa1.46□□□□□ -2.18
MATALPHA1YCR040W YGR025WP53216 100 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-LR1P0C2J3 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-FP0CX63 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-GR2P0CX64 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-DR2Q03494 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-OR1Q12113 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-BQ12491 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W TY2B-OR2Q12501 1770 aa1.46□□□□□ -2.18
MATALPHA1YCR040W PMD1P32634 1753 aa1.45□□□□□ -2.18
MATALPHA1YCR040W TCB3Q03640 1545 aaKnown RBP1.45□□□□□ -2.18
MATALPHA1YCR040W TY2B-DR3Q07791 1770 aaKnown RBP1.43□□□□□ -2.18
MATALPHA1YCR040W SMC4Q12267 1418 aa1.42□□□□□ -2.18
MATALPHA1YCR040W HUB1Q6Q546 73 aa1.42□□□□□ -2.18
MATALPHA1YCR040W IML1P47170 1584 aa1.42□□□□□ -2.18
MATALPHA1YCR040W ERI1P62651 68 aaKnown RBP1.41□□□□□ -2.18
MATALPHA1YCR040W DNF1P32660 1571 aa1.38□□□□□ -2.19
MATALPHA1YCR040W BPH1P25356 2167 aa1.38□□□□□ -2.19
MATALPHA1YCR040W OLI1P61829 76 aa1.38□□□□□ -2.19
MATALPHA1YCR040W RRP5Q05022 1729 aaKnown RBP1.36□□□□□ -2.19
MATALPHA1YCR040W KOG1P38873 1557 aa1.35□□□□□ -2.19
MATALPHA1YCR040W YSY6P38374 65 aa1.34□□□□□ -2.19
MATALPHA1YCR040W IQG1Q12280 1495 aa1.34□□□□□ -2.19
MATALPHA1YCR040W ARO1P08566 1588 aaKnown RBP1.34□□□□□ -2.2
MATALPHA1YCR040W YBL044WP38194 122 aa1.33□□□□□ -2.2
MATALPHA1YCR040W YBR200W-AQ3E755 54 aa1.33□□□□□ -2.2
MATALPHA1YCR040W YOR011W-AQ3E807 68 aa1.33□□□□□ -2.2
MATALPHA1YCR040W FKS3Q04952 1785 aa1.33□□□□□ -2.2
MATALPHA1YCR040W RPO31P04051 1460 aa1.32□□□□□ -2.2
MATALPHA1YCR040W VPS15P22219 1454 aa1.32□□□□□ -2.2
MATALPHA1YCR040W YBL039W-BP0C268 59 aa1.32□□□□□ -2.2
MATALPHA1YCR040W MMS1Q06211 1407 aa1.32□□□□□ -2.2
MATALPHA1YCR040W DNF2Q12675 1612 aa1.3□□□□□ -2.2
MATALPHA1YCR040W MYO4P32492 1471 aa1.3□□□□□ -2.2
MATALPHA1YCR040W YOR394C-AQ8TGJ0 55 aa1.29□□□□□ -2.2
MATALPHA1YCR040W YDR182W-AQ3E796 67 aa1.28□□□□□ -2.2
MATALPHA1YCR040W IRC20Q06554 1556 aa1.28□□□□□ -2.2
MATALPHA1YCR040W YOL131WQ08270 108 aa1.27□□□□□ -2.21
MATALPHA1YCR040W YIL102C-AQ2V2P5 75 aa1.27□□□□□ -2.21
MATALPHA1YCR040W YDR246W-AQ3E763 66 aa1.27□□□□□ -2.21
MATALPHA1YCR040W RPS27AP35997 82 aaKnown RBP1.26□□□□□ -2.21
MATALPHA1YCR040W RPS30AP0CX33 63 aaKnown RBP1.23□□□□□ -2.21
MATALPHA1YCR040W RPS30BP0CX34 63 aaKnown RBP1.23□□□□□ -2.21
MATALPHA1YCR040W YCR108CQ3E819 63 aa1.22□□□□□ -2.21
MATALPHA1YCR040W TY3B-GQ99315 1547 aa1.21□□□□□ -2.22
MATALPHA1YCR040W YFR010W-AP0C5N0 62 aa1.21□□□□□ -2.22
MATALPHA1YCR040W SIP18P50263 79 aa1.18□□□□□ -2.22
MATALPHA1YCR040W TAO3P40468 2376 aa1.18□□□□□ -2.22
MATALPHA1YCR040W VMA9Q3E7B6 73 aa1.17□□□□□ -2.22
MATALPHA1YCR040W BCK1Q01389 1478 aa1.17□□□□□ -2.22
MATALPHA1YCR040W RPO21P04050 1733 aaKnown RBP1.13□□□□□ -2.23
MATALPHA1YCR040W YOR008C-AQ3E7B9 74 aa1.13□□□□□ -2.23
MATALPHA1YCR040W PDR12Q02785 1511 aa1.13□□□□□ -2.23
MATALPHA1YCR040W SEN1Q00416 2231 aaKnown RBP1.12□□□□□ -2.23
MATALPHA1YCR040W VMR1P38735 1592 aa1.12□□□□□ -2.23
MATALPHA1YCR040W SPO14P36126 1683 aa1.09□□□□□ -2.24
MATALPHA1YCR040W YMR001C-AQ8TGS9 76 aa1.08□□□□□ -2.24
MATALPHA1YCR040W HAP1P0CE41 1502 aa1.08□□□□□ -2.24
MATALPHA1YCR040W YOL166W-AQ8TGJ1 51 aa1.06□□□□□ -2.24
MATALPHA1YCR040W YLR157W-DP0CE99 70 aa1.04□□□□□ -2.24
MATALPHA1YCR040W YBR230W-AQ3E762 66 aa1.02□□□□□ -2.25
MATALPHA1YCR040W VTH1P40438 1549 aa1.01□□□□□ -2.25
MATALPHA1YCR040W VTH2P40890 1549 aa1.01□□□□□ -2.25
MATALPHA1YCR040W PDR15Q04182 1529 aaKnown RBP1.01□□□□□ -2.25
MATALPHA1YCR040W PDR5P33302 1511 aaKnown RBP1□□□□□ -2.25
MATALPHA1YCR040W TOS6P48560 102 aa0.97□□□□□ -2.25
MATALPHA1YCR040W YKL023C-AQ2V2P3 75 aa0.94□□□□□ -2.26
MATALPHA1YCR040W YBT1P32386 1661 aa0.93□□□□□ -2.26
MATALPHA1YCR040W CDC25P04821 1589 aa0.91□□□□□ -2.26
MATALPHA1YCR040W YCF1P39109 1515 aaKnown RBP0.91□□□□□ -2.26
MATALPHA1YCR040W RPS27BP38711 82 aa0.9□□□□□ -2.27
MATALPHA1YCR040W RPS29AP41057 56 aaKnown RBP0.89□□□□□ -2.27
MATALPHA1YCR040W MON2P48563 1636 aaPredicted RBP0.88□□□□□ -2.27
MATALPHA1YCR040W TY1B-DR4Q07793 1604 aa0.88□□□□□ -2.27
MATALPHA1YCR040W YOR192C-CQ3E736 78 aa0.87□□□□□ -2.27
MATALPHA1YCR040W SPT6P23615 1451 aaKnown RBP0.86□□□□□ -2.27
MATALPHA1YCR040W SNQ2P32568 1501 aaKnown RBP0.85□□□□□ -2.27
MATALPHA1YCR040W YOR093CQ12275 1648 aa0.83□□□□□ -2.28
MATALPHA1YCR040W YGR146C-AQ8TGT9 53 aa0.83□□□□□ -2.28
MATALPHA1YCR040W NUP188P52593 1655 aaKnown RBP0.83□□□□□ -2.28
MATALPHA1YCR040W COA2Q3E823 68 aa0.8□□□□□ -2.28
MATALPHA1YCR040W SSK2P53599 1579 aa0.79□□□□□ -2.28
MATALPHA1YCR040W USO1P25386 1790 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms