RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W YOR008C-AQ3E7B9 74 aa-0.29□□□□□ -2.46
YCL020WYCL020W TY2B-LR1P0C2J3 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-FP0CX63 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-GR2P0CX64 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-CP25384 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-DR2Q03494 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-DR3Q07791 1770 aaKnown RBP-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-OR1Q12113 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-DR1Q12472 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-BQ12491 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W TY2B-OR2Q12501 1770 aa-0.3□□□□□ -2.46
YCL020WYCL020W CWP2P43497 92 aa-0.3□□□□□ -2.46
YCL020WYCL020W YDL022C-AP0C5L6 82 aa-0.31□□□□□ -2.46
YCL020WYCL020W OLI1P61829 76 aa-0.31□□□□□ -2.46
YCL020WYCL020W SMC4Q12267 1418 aa-0.31□□□□□ -2.46
YCL020WYCL020W MMS22Q06164 1454 aa-0.32□□□□□ -2.46
YCL020WYCL020W ATP17Q06405 101 aa-0.32□□□□□ -2.46
YCL020WYCL020W YSP2Q06681 1438 aa-0.32□□□□□ -2.46
YCL020WYCL020W APC1P53886 1748 aa-0.32□□□□□ -2.46
YCL020WYCL020W SIN3P22579 1536 aa-0.32□□□□□ -2.46
YCL020WYCL020W RPS27AP35997 82 aaKnown RBP-0.33□□□□□ -2.46
YCL020WYCL020W MLP1Q02455 1875 aaKnown RBP-0.33□□□□□ -2.46
YCL020WYCL020W YLR146W-AQ2V2P1 62 aa-0.33□□□□□ -2.46
YCL020WYCL020W SWM2P40342 146 aa-0.34□□□□□ -2.46
YCL020WYCL020W SIP18P50263 79 aa-0.34□□□□□ -2.46
YCL020WYCL020W VTH1P40438 1549 aa-0.34□□□□□ -2.46
YCL020WYCL020W VTH2P40890 1549 aa-0.34□□□□□ -2.46
YCL020WYCL020W YPR117WQ06116 2489 aa-0.34□□□□□ -2.46
YCL020WYCL020W IRC20Q06554 1556 aa-0.34□□□□□ -2.46
YCL020WYCL020W ESC1Q03661 1658 aaKnown RBP-0.34□□□□□ -2.46
YCL020WYCL020W QCR9P22289 66 aa-0.35□□□□□ -2.46
YCL020WYCL020W TOS6P48560 102 aa-0.35□□□□□ -2.46
YCL020WYCL020W YOR011W-AQ3E807 68 aa-0.35□□□□□ -2.46
YCL020WYCL020W YGR121W-AQ3E816 71 aa-0.35□□□□□ -2.46
YCL020WYCL020W YOR394C-AQ8TGJ0 55 aa-0.35□□□□□ -2.46
YCL020WYCL020W YBR200W-AQ3E755 54 aa-0.36□□□□□ -2.47
YCL020WYCL020W TOR2P32600 2474 aaKnown RBP-0.36□□□□□ -2.47
YCL020WYCL020W ESP1Q03018 1630 aa-0.36□□□□□ -2.47
YCL020WYCL020W KOG1P38873 1557 aa-0.37□□□□□ -2.47
YCL020WYCL020W YGR035W-AQ45U48 73 aa-0.38□□□□□ -2.47
YCL020WYCL020W SPO14P36126 1683 aa-0.38□□□□□ -2.47
YCL020WYCL020W YOR032W-AQ8TGS1 66 aa-0.38□□□□□ -2.47
YCL020WYCL020W YBL039W-BP0C268 59 aa-0.39□□□□□ -2.47
YCL020WYCL020W TOR1P35169 2470 aa-0.4□□□□□ -2.47
YCL020WYCL020W TY1B-NL2Q99337 1749 aaKnown RBP-0.4□□□□□ -2.47
YCL020WYCL020W FMP27Q06179 2628 aa-0.4□□□□□ -2.47
YCL020WYCL020W PAU7P39545 55 aa-0.4□□□□□ -2.47
YCL020WYCL020W TY3B-GQ99315 1547 aa-0.42□□□□□ -2.48
YCL020WYCL020W TEL1P38110 2787 aa-0.42□□□□□ -2.48
YCL020WYCL020W YHR050W-AQ05451 56 aa-0.42□□□□□ -2.48
YCL020WYCL020W COA2Q3E823 68 aa-0.42□□□□□ -2.48
YCL020WYCL020W HUB1Q6Q546 73 aa-0.42□□□□□ -2.48
YCL020WYCL020W SPI1P40092 148 aa-0.43□□□□□ -2.48
YCL020WYCL020W YDR119W-AQ2V2P9 66 aa-0.43□□□□□ -2.48
YCL020WYCL020W HAP1P0CE41 1502 aa-0.44□□□□□ -2.48
YCL020WYCL020W TIM12P32830 109 aa-0.44□□□□□ -2.48
YCL020WYCL020W SSS1P35179 80 aa-0.44□□□□□ -2.48
YCL020WYCL020W YDR524C-BQ3E6R4 66 aa-0.44□□□□□ -2.48
YCL020WYCL020W MDN1Q12019 4910 aaKnown RBP-0.45□□□□□ -2.48
YCL020WYCL020W GCN1P33892 2672 aaKnown RBP-0.45□□□□□ -2.48
YCL020WYCL020W MEC1P38111 2368 aa-0.46□□□□□ -2.48
YCL020WYCL020W RPO21P04050 1733 aaKnown RBP-0.47□□□□□ -2.48
YCL020WYCL020W RPS27BP38711 82 aa-0.47□□□□□ -2.48
YCL020WYCL020W YBR230W-AQ3E762 66 aa-0.47□□□□□ -2.48
YCL020WYCL020W SKI3P17883 1432 aaKnown RBP-0.47□□□□□ -2.49
YCL020WYCL020W ERI1P62651 68 aaKnown RBP-0.49□□□□□ -2.49
YCL020WYCL020W YGR146C-AQ8TGT9 53 aa-0.5□□□□□ -2.49
YCL020WYCL020W FKS3Q04952 1785 aa-0.5□□□□□ -2.49
YCL020WYCL020W UFD4P33202 1483 aa-0.51□□□□□ -2.49
YCL020WYCL020W BCK1Q01389 1478 aa-0.51□□□□□ -2.49
YCL020WYCL020W YHR213W-AQ8TGT4 77 aa-0.51□□□□□ -2.49
YCL020WYCL020W ARO1P08566 1588 aaKnown RBP-0.51□□□□□ -2.49
YCL020WYCL020W YLL006W-AQ3E814 58 aa-0.52□□□□□ -2.49
YCL020WYCL020W YFL041W-AQ3E817 63 aa-0.52□□□□□ -2.49
YCL020WYCL020W IML1P47170 1584 aa-0.53□□□□□ -2.49
YCL020WYCL020W NUM1Q00402 2748 aa-0.53□□□□□ -2.49
YCL020WYCL020W CUP1-1P0CX80 61 aa-0.54□□□□□ -2.5
YCL020WYCL020W CUP1-2P0CX81 61 aa-0.54□□□□□ -2.5
YCL020WYCL020W YGL258W-AQ3E740 77 aa-0.54□□□□□ -2.5
YCL020WYCL020W VPS15P22219 1454 aa-0.54□□□□□ -2.5
YCL020WYCL020W RPS30AP0CX33 63 aaKnown RBP-0.55□□□□□ -2.5
YCL020WYCL020W RPS30BP0CX34 63 aaKnown RBP-0.55□□□□□ -2.5
YCL020WYCL020W RPO31P04051 1460 aa-0.55□□□□□ -2.5
YCL020WYCL020W NUP159P40477 1460 aa-0.55□□□□□ -2.5
YCL020WYCL020W DYN1P36022 4092 aa-0.55□□□□□ -2.5
YCL020WYCL020W IQG1Q12280 1495 aa-0.56□□□□□ -2.5
YCL020WYCL020W YSY6P38374 65 aa-0.56□□□□□ -2.5
YCL020WYCL020W YOR072W-BQ3E832 53 aa-0.56□□□□□ -2.5
YCL020WYCL020W PDR12Q02785 1511 aa-0.56□□□□□ -2.5
YCL020WYCL020W DNF2Q12675 1612 aa-0.57□□□□□ -2.5
YCL020WYCL020W Q0017Q9ZZX8 53 aa-0.58□□□□□ -2.5
YCL020WYCL020W DOP1Q03921 1698 aa-0.58□□□□□ -2.5
YCL020WYCL020W YLR157W-DP0CE99 70 aa-0.59□□□□□ -2.5
YCL020WYCL020W YOL131WQ08270 108 aa-0.59□□□□□ -2.5
YCL020WYCL020W PAI3P01094 68 aa-0.6□□□□□ -2.5
YCL020WYCL020W YOL166W-AQ8TGJ1 51 aa-0.6□□□□□ -2.5
YCL020WYCL020W PDR15Q04182 1529 aaKnown RBP-0.6□□□□□ -2.51
YCL020WYCL020W CSF1Q12150 2958 aa-0.61□□□□□ -2.51
YCL020WYCL020W DNF1P32660 1571 aa-0.61□□□□□ -2.51
YCL020WYCL020W IRA2P19158 3079 aa-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms