RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b STF1P01098 86 aa3.64□□□□□ -1.83
snR17bsnR17b YCR050CP25630 102 aa3.64□□□□□ -1.83
snR17bsnR17b MIG3P39943 394 aa3.64□□□□□ -1.83
snR17bsnR17b COX17Q12287 69 aa3.64□□□□□ -1.83
snR17bsnR17b YPR117WQ06116 2489 aa3.64□□□□□ -1.83
snR17bsnR17b YFR035CP43608 114 aa3.63□□□□□ -1.83
snR17bsnR17b TOS8P53147 276 aa3.63□□□□□ -1.83
snR17bsnR17b YMR295CQ03559 197 aa3.63□□□□□ -1.83
snR17bsnR17b YLR285C-AQ3E771 56 aa3.63□□□□□ -1.83
snR17bsnR17b YLR236CA0A023PZG4 107 aa3.62□□□□□ -1.83
snR17bsnR17b YJR107C-AP0CT86 78 aa3.62□□□□□ -1.83
snR17bsnR17b RPR2P40571 144 aa3.62□□□□□ -1.83
snR17bsnR17b UBC11P52492 156 aa3.62□□□□□ -1.83
snR17bsnR17b YMR244WQ04018 355 aa3.62□□□□□ -1.83
snR17bsnR17b IRC21Q04772 201 aa3.62□□□□□ -1.83
snR17bsnR17b YOR020W-AQ3E824 90 aa3.62□□□□□ -1.83
snR17bsnR17b IRA1P18963 3092 aa3.62□□□□□ -1.83
snR17bsnR17b SPS100P13130 326 aa3.61□□□□□ -1.83
snR17bsnR17b COX14P39103 70 aa3.61□□□□□ -1.83
snR17bsnR17b YER187WP40102 141 aa3.61□□□□□ -1.83
snR17bsnR17b SBH1P52870 82 aa3.61□□□□□ -1.83
snR17bsnR17b EDC1P53080 175 aaPredicted RBP3.61□□□□□ -1.83
snR17bsnR17b YLL006W-AQ3E814 58 aa3.61□□□□□ -1.83
snR17bsnR17b YBR219CP38317 127 aa3.6□□□□□ -1.83
snR17bsnR17b YIR020CP40575 100 aa3.6□□□□□ -1.83
snR17bsnR17b YGL260WP53056 76 aa3.6□□□□□ -1.83
snR17bsnR17b PMP3P87284 55 aa3.6□□□□□ -1.83
snR17bsnR17b MRPS8Q03799 155 aa3.6□□□□□ -1.83
snR17bsnR17b YLR281CQ05863 155 aa3.6□□□□□ -1.83
snR17bsnR17b RPL11AP0C0W9 174 aaKnown RBP3.59□□□□□ -1.83
snR17bsnR17b YLR156WP0CE96 114 aa3.59□□□□□ -1.83
snR17bsnR17b YLR159WP0CE97 114 aa3.59□□□□□ -1.83
snR17bsnR17b YLR161WP0CE98 114 aa3.59□□□□□ -1.83
snR17bsnR17b HAL1Q01766 294 aa3.59□□□□□ -1.83
snR17bsnR17b TMC1Q08422 150 aaPredicted RBP3.59□□□□□ -1.83
snR17bsnR17b VAM10Q08474 114 aa3.59□□□□□ -1.83
snR17bsnR17b YDR246W-AQ3E763 66 aa3.59□□□□□ -1.83
snR17bsnR17b YBR121C-AP0C5L4 52 aa3.58□□□□□ -1.84
snR17bsnR17b MPC3P53311 146 aa3.58□□□□□ -1.84
snR17bsnR17b RPL11BQ3E757 174 aaPredicted RBP3.58□□□□□ -1.84
snR17bsnR17b RPS28BP0C0X0 67 aaKnown RBP3.57□□□□□ -1.84
snR17bsnR17b YRA2P36036 203 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
snR17bsnR17b YAR029WP39549 74 aa3.57□□□□□ -1.84
snR17bsnR17b ATP18P81450 59 aa3.57□□□□□ -1.84
snR17bsnR17b HOR7Q05827 59 aa3.57□□□□□ -1.84
snR17bsnR17b RPS28AQ3E7X9 67 aaPredicted RBP3.57□□□□□ -1.84
snR17bsnR17b TRA1P38811 3744 aa3.57□□□□□ -1.84
snR17bsnR17b BET1P22804 142 aa3.56□□□□□ -1.84
snR17bsnR17b AIM4P38305 123 aaPredicted RBP3.56□□□□□ -1.84
snR17bsnR17b ALG13P53178 202 aa3.56□□□□□ -1.84
snR17bsnR17b YMR175W-AQ3E766 64 aa3.56□□□□□ -1.84
snR17bsnR17b TAR1Q8TGM6 124 aa3.56□□□□□ -1.84
snR17bsnR17b RPS11AP0CX47 156 aaKnown RBP3.55□□□□□ -1.84
snR17bsnR17b RPS11BP0CX48 156 aaKnown RBP3.55□□□□□ -1.84
snR17bsnR17b GAT4P40569 121 aa3.55□□□□□ -1.84
snR17bsnR17b RPL38P49167 78 aaKnown RBP3.55□□□□□ -1.84
snR17bsnR17b TIM10P87108 93 aa3.55□□□□□ -1.84
snR17bsnR17b SPG4Q04438 115 aa3.55□□□□□ -1.84
snR17bsnR17b ATP20Q12233 115 aa3.55□□□□□ -1.84
snR17bsnR17b ICY1Q04329 127 aa3.54□□□□□ -1.84
snR17bsnR17b KTI11Q3E840 82 aa3.54□□□□□ -1.84
snR17bsnR17b YFR009W-AP0C5M9 85 aa3.53□□□□□ -1.84
snR17bsnR17b ERG28P40030 148 aa3.53□□□□□ -1.84
snR17bsnR17b YPS5P53057 165 aa3.53□□□□□ -1.84
snR17bsnR17b SRL1Q08673 210 aa3.53□□□□□ -1.84
snR17bsnR17b KSH1Q8TGJ3 72 aa3.53□□□□□ -1.84
snR17bsnR17b YAL065CO13511 128 aa3.52□□□□□ -1.85
snR17bsnR17b UBC4P15731 148 aa3.52□□□□□ -1.85
snR17bsnR17b RSM19P53733 91 aaPredicted RBP3.52□□□□□ -1.85
snR17bsnR17b ERI1P62651 68 aaKnown RBP3.52□□□□□ -1.85
snR17bsnR17b YKL183C-AQ3E765 70 aa3.52□□□□□ -1.85
snR17bsnR17b URA2P07259 2214 aaKnown RBP3.51□□□□□ -1.85
snR17bsnR17b RSM18P40033 138 aa3.51□□□□□ -1.85
snR17bsnR17b TDA2P40045 126 aa3.51□□□□□ -1.85
snR17bsnR17b YPL278CQ08990 100 aa3.51□□□□□ -1.85
snR17bsnR17b CRC1Q12289 327 aa3.51□□□□□ -1.85
snR17bsnR17b YMR122W-AQ3E842 84 aa3.51□□□□□ -1.85
snR17bsnR17b TDA8Q6B2U8 126 aa3.51□□□□□ -1.85
snR17bsnR17b NOP10Q6Q547 58 aaPredicted RBP3.51□□□□□ -1.85
snR17bsnR17b GCN1P33892 2672 aaKnown RBP3.5□□□□□ -1.85
snR17bsnR17b RPL29P05747 59 aaPredicted RBP3.5□□□□□ -1.85
snR17bsnR17b YFL019CP43576 117 aa3.5□□□□□ -1.85
snR17bsnR17b YLR412C-AQ3E742 68 aa3.5□□□□□ -1.85
snR17bsnR17b TSC3Q3E790 80 aa3.5□□□□□ -1.85
snR17bsnR17b MVB12P42939 101 aa3.49□□□□□ -1.85
snR17bsnR17b YGR164WP53291 111 aa3.49□□□□□ -1.85
snR17bsnR17b YOR314WQ12506 109 aa3.49□□□□□ -1.85
snR17bsnR17b SPO24Q3E752 67 aa3.49□□□□□ -1.85
snR17bsnR17b TOR2P32600 2474 aaKnown RBP3.49□□□□□ -1.85
snR17bsnR17b YCR041WP37265 110 aa3.48□□□□□ -1.85
snR17bsnR17b SMD1Q02260 146 aaPredicted RBP3.48□□□□□ -1.85
snR17bsnR17b ICS3P47034 131 aa3.47□□□□□ -1.85
snR17bsnR17b YMR320WQ04897 101 aa3.47□□□□□ -1.85
snR17bsnR17b YDL241WQ07738 123 aa3.47□□□□□ -1.85
snR17bsnR17b RPL36BO14455 100 aaKnown RBP3.46□□□□□ -1.86
snR17bsnR17b RPL36AP05745 100 aaPredicted RBP3.46□□□□□ -1.86
snR17bsnR17b YCR001WP25347 104 aa3.46□□□□□ -1.86
snR17bsnR17b YOL014WQ08110 124 aa3.46□□□□□ -1.86
snR17bsnR17b YGR240C-AQ3E786 66 aa3.46□□□□□ -1.86
snR17bsnR17b YDR182W-AQ3E796 67 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms