RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	SEC7	P11075	2009 aa	Known RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	SNQ2	P32568	1501 aa	Known RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	YLR255C	O13574	117 aa		0.54	□□□□□ -2.32
RLM1	YPL089C	YBT1	P32386	1661 aa		0.53	□□□□□ -2.32
RLM1	YPL089C	YLR419W	Q06698	1435 aa	Known RBP	0.53	□□□□□ -2.32
RLM1	YPL089C	CCW14	O13547	238 aa		0.53	□□□□□ -2.32
RLM1	YPL089C	AUA1	P32450	94 aa		0.53	□□□□□ -2.32
RLM1	YPL089C	SRB6	P32570	121 aa		0.53	□□□□□ -2.32
RLM1	YPL089C	IML1	P47170	1584 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	BUD3	P25558	1636 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	IMP2	P46972	177 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	FYV7	Q12247	151 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	BCK1	Q01389	1478 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	GCN2	P15442	1659 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	HAP1	P0CE41	1502 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	STU1	P38198	1513 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	SMC4	Q12267	1418 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	POL1	P13382	1468 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	MYO4	P32492	1471 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	IQG1	Q12280	1495 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	YDR210W	Q03482	75 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	FKS3	Q04952	1785 aa		0.52	□□□□□ -2.33
RLM1	YPL089C	VMR1	P38735	1592 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	KRE5	P22023	1365 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	SNF2	P22082	1703 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	KSH1	Q8TGJ3	72 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	RRP5	Q05022	1729 aa	Known RBP	0.51	□□□□□ -2.33
RLM1	YPL089C	SSN2	P38931	1420 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	YSP2	Q06681	1438 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	URB1	P34241	1764 aa	Known RBP	0.51	□□□□□ -2.33
RLM1	YPL089C	YRF1-6	P53819	1859 aa		0.51	□□□□□ -2.33
RLM1	YPL089C	PAU5	P43575	122 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	MIX14	Q04341	121 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	YPL038W-A	Q3E7B4	63 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	SHU1	P38751	150 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	GCV3	P39726	170 aa	Predicted RBP	0.5	□□□□□ -2.33
RLM1	YPL089C	YIL086C	P40503	102 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	RSM19	P53733	91 aa	Predicted RBP	0.5	□□□□□ -2.33
RLM1	YPL089C	YCR095W-A	Q3E787	52 aa		0.5	□□□□□ -2.33
RLM1	YPL089C	PRP8	P33334	2413 aa	Known RBP	0.5	□□□□□ -2.33
RLM1	YPL089C	TY4B-H	P0C2J7	1802 aa		0.49	□□□□□ -2.33
RLM1	YPL089C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.49	□□□□□ -2.33
RLM1	YPL089C	PDR5	P33302	1511 aa	Known RBP	0.49	□□□□□ -2.33
RLM1	YPL089C	BRR2	P32639	2163 aa	Known RBP	0.49	□□□□□ -2.33
RLM1	YPL089C	COX12	Q01519	83 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	COX19	Q3E731	98 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	YBR072C-A	Q3E794	53 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	GEA1	P47102	1408 aa	Predicted RBP	0.48	□□□□□ -2.33
RLM1	YPL089C	RIM15	P43565	1770 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	NUP192	P47054	1683 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	ROX3	P25046	220 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	MPC2	P38857	129 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	YHR173C	P38864	112 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	SNA2	P56508	79 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	YOR289W	Q12012	251 aa	Predicted RBP	0.48	□□□□□ -2.33
RLM1	YPL089C	YDR010C	Q12426	110 aa		0.48	□□□□□ -2.33
RLM1	YPL089C	FAS2	P19097	1887 aa	Known RBP	0.48	□□□□□ -2.33
RLM1	YPL089C	APC1	P53886	1748 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	CAT8	P39113	1433 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	PDR11	P40550	1411 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	PAU6	P0CE90	120 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	PAU18	P0CE91	120 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	ZEO1	Q08245	113 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	HMRA1	P0CY11	126 aa		0.47	□□□□□ -2.33
RLM1	YPL089C	YPL225W	Q08971	146 aa	Known RBP	0.47	□□□□□ -2.33
RLM1	YPL089C	FIG2	P25653	1609 aa		0.46	□□□□□ -2.34
RLM1	YPL089C	SRB8	P25648	1427 aa		0.46	□□□□□ -2.34
RLM1	YPL089C	POL2	P21951	2222 aa	Known RBP	0.46	□□□□□ -2.34
RLM1	YPL089C	YHL005C	P38752	130 aa		0.46	□□□□□ -2.34
RLM1	YPL089C	RRT15	Q3E811	62 aa		0.46	□□□□□ -2.34
RLM1	YPL089C	BLM10	P43583	2143 aa		0.46	□□□□□ -2.34
RLM1	YPL089C	MRP17	P28778	131 aa		0.45	□□□□□ -2.34
RLM1	YPL089C	MRX7	P53869	86 aa		0.45	□□□□□ -2.34
RLM1	YPL089C	ICY1	Q04329	127 aa		0.45	□□□□□ -2.34
RLM1	YPL089C	YOL164W-A	Q3E7A5	60 aa		0.45	□□□□□ -2.34
RLM1	YPL089C	YNR034W-A	Q3E841	98 aa		0.45	□□□□□ -2.34
RLM1	YPL089C	UTP10	P42945	1769 aa	Known RBP	0.45	□□□□□ -2.34
RLM1	YPL089C	MRPL38	P35996	138 aa	Predicted RBP	0.45	□□□□□ -2.34
RLM1	YPL089C	YBL071C	P38185	102 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	EMC5	P40540	141 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	PAU20	Q08322	120 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	HKR1	P41809	1802 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	RSF2	P46974	1380 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	YPR117W	Q06116	2489 aa		0.44	□□□□□ -2.34
RLM1	YPL089C	RPS11A	P0CX47	156 aa	Known RBP	0.43	□□□□□ -2.34
RLM1	YPL089C	RPS11B	P0CX48	156 aa	Known RBP	0.43	□□□□□ -2.34
RLM1	YPL089C	MSL1	P40567	111 aa	Predicted RBP	0.43	□□□□□ -2.34
RLM1	YPL089C	SPC1	P46965	94 aa		0.43	□□□□□ -2.34
RLM1	YPL089C	NHP10	Q03435	203 aa		0.43	□□□□□ -2.34
RLM1	YPL089C	PMD1	P32634	1753 aa		0.43	□□□□□ -2.34
RLM1	YPL089C	TOR1	P35169	2470 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	TAO3	P40468	2376 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU1	P0CE88	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU14	P0CE89	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU8	P0CE92	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU11	P0CE93	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	YBR292C	P38357	123 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU13	P38725	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	RSM18	P40033	138 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	AIM19	P40502	157 aa		0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms