RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YLR118CQ12354 227 aa0.47□□□□□ -2.33
BRO1YPL084W YFR035CP43608 114 aa0.46□□□□□ -2.34
BRO1YPL084W AIM11P87275 137 aa0.46□□□□□ -2.34
BRO1YPL084W YGL041C-BQ3E750 60 aa0.46□□□□□ -2.34
BRO1YPL084W OST5Q92316 86 aa0.46□□□□□ -2.34
BRO1YPL084W Q0297Q9ZZV8 51 aa0.46□□□□□ -2.34
BRO1YPL084W VMA7P39111 118 aa0.45□□□□□ -2.34
BRO1YPL084W YPL261CQ08976 102 aa0.45□□□□□ -2.34
BRO1YPL084W YLR285C-AQ3E771 56 aa0.45□□□□□ -2.34
BRO1YPL084W YLR099W-AQ3E798 87 aa0.45□□□□□ -2.34
BRO1YPL084W BLM10P43583 2143 aa0.45□□□□□ -2.34
BRO1YPL084W COX23P38824 151 aa0.45□□□□□ -2.34
BRO1YPL084W SPC24Q04477 213 aa0.45□□□□□ -2.34
BRO1YPL084W AUA1P32450 94 aa0.44□□□□□ -2.34
BRO1YPL084W YHR130CP38834 111 aa0.44□□□□□ -2.34
BRO1YPL084W YGR035W-AQ45U48 73 aa0.44□□□□□ -2.34
BRO1YPL084W RPB11P38902 120 aa0.44□□□□□ -2.34
BRO1YPL084W CYB5P40312 120 aa0.44□□□□□ -2.34
BRO1YPL084W RPS29BP41058 56 aaKnown RBP0.44□□□□□ -2.34
BRO1YPL084W PCC1Q3E833 88 aa0.43□□□□□ -2.34
BRO1YPL084W YIR020CP40575 100 aa0.43□□□□□ -2.34
BRO1YPL084W ARL3Q02804 198 aa0.43□□□□□ -2.34
BRO1YPL084W FRQ1Q06389 190 aa0.43□□□□□ -2.34
BRO1YPL084W YCR099CP25657 155 aa0.42□□□□□ -2.34
BRO1YPL084W TDA2P40045 126 aa0.42□□□□□ -2.34
BRO1YPL084W YER187WP40102 141 aa0.42□□□□□ -2.34
BRO1YPL084W MRPS12P53732 153 aa0.42□□□□□ -2.34
BRO1YPL084W RPL22BP56628 122 aaKnown RBP0.42□□□□□ -2.34
BRO1YPL084W YEA6P39953 335 aa0.41□□□□□ -2.34
BRO1YPL084W SNN1P48232 102 aa0.4□□□□□ -2.34
BRO1YPL084W YLR363W-AQ3E747 85 aa0.4□□□□□ -2.34
BRO1YPL084W PAU24P38155 120 aa0.4□□□□□ -2.35
BRO1YPL084W VPS55P47111 140 aa0.39□□□□□ -2.35
BRO1YPL084W DAD1Q12248 94 aa0.39□□□□□ -2.35
BRO1YPL084W VPS13Q07878 3144 aa0.39□□□□□ -2.35
BRO1YPL084W PAU2P32612 120 aa0.39□□□□□ -2.35
BRO1YPL084W YOR032W-AQ8TGS1 66 aa0.39□□□□□ -2.35
BRO1YPL084W CSF1Q12150 2958 aa0.39□□□□□ -2.35
BRO1YPL084W HMRA2P0CY13 119 aa0.38□□□□□ -2.35
BRO1YPL084W YAR029WP39549 74 aa0.38□□□□□ -2.35
BRO1YPL084W PAM16P42949 149 aa0.38□□□□□ -2.35
BRO1YPL084W APS2Q00381 147 aa0.38□□□□□ -2.35
BRO1YPL084W YLR042CQ07990 161 aa0.38□□□□□ -2.35
BRO1YPL084W YDR010CQ12426 110 aa0.38□□□□□ -2.35
BRO1YPL084W WIP1Q2V2P8 89 aa0.38□□□□□ -2.35
BRO1YPL084W YLR365WQ7LIF2 110 aa0.38□□□□□ -2.35
BRO1YPL084W ROX3P25046 220 aa0.37□□□□□ -2.35
BRO1YPL084W GTT1P40582 234 aa0.37□□□□□ -2.35
BRO1YPL084W YLR255CO13574 117 aa0.34□□□□□ -2.35
BRO1YPL084W ADK1P07170 222 aaKnown RBP0.34□□□□□ -2.35
BRO1YPL084W PAU19P0CE85 124 aa0.34□□□□□ -2.35
BRO1YPL084W PAU3P25610 124 aa0.34□□□□□ -2.35
BRO1YPL084W RTR2Q12378 196 aa0.34□□□□□ -2.35
BRO1YPL084W YIR021W-AQ3E739 70 aa0.34□□□□□ -2.35
BRO1YPL084W YCL048W-AQ2V2Q2 79 aa0.34□□□□□ -2.36
BRO1YPL084W YBR072C-AQ3E794 53 aa0.34□□□□□ -2.36
BRO1YPL084W YHR173CP38864 112 aa0.32□□□□□ -2.36
BRO1YPL084W LSM6Q06406 86 aaKnown RBP0.32□□□□□ -2.36
BRO1YPL084W YOL164W-AQ3E7A5 60 aa0.32□□□□□ -2.36
BRO1YPL084W GCV3P39726 170 aaPredicted RBP0.31□□□□□ -2.36
BRO1YPL084W HUR1P45820 110 aa0.31□□□□□ -2.36
BRO1YPL084W MLP1Q02455 1875 aaKnown RBP0.3□□□□□ -2.36
BRO1YPL084W YIL086CP40503 102 aa0.3□□□□□ -2.36
BRO1YPL084W YOL118CQ08259 102 aa0.3□□□□□ -2.36
BRO1YPL084W YER039C-AP0CD97 72 aa0.29□□□□□ -2.36
BRO1YPL084W SHU1P38751 150 aa0.29□□□□□ -2.36
BRO1YPL084W IMP2P46972 177 aa0.29□□□□□ -2.36
BRO1YPL084W PAU15P40585 124 aa0.29□□□□□ -2.36
BRO1YPL084W YDR210WQ03482 75 aa0.29□□□□□ -2.36
BRO1YPL084W PAU16P35994 123 aa0.28□□□□□ -2.36
BRO1YPL084W YHR138CP38841 114 aaPredicted RBP0.28□□□□□ -2.36
BRO1YPL084W VMA21P41806 77 aa0.28□□□□□ -2.36
BRO1YPL084W YGR164WP53291 111 aa0.28□□□□□ -2.36
BRO1YPL084W SWC7Q06707 132 aa0.27□□□□□ -2.37
BRO1YPL084W COX19Q3E731 98 aa0.27□□□□□ -2.37
BRO1YPL084W YOR304C-AO14468 76 aa0.27□□□□□ -2.37
BRO1YPL084W BUD23P25627 275 aaPredicted RBP0.27□□□□□ -2.37
BRO1YPL084W TRA1P38811 3744 aa0.26□□□□□ -2.37
BRO1YPL084W MPC2P38857 129 aa0.25□□□□□ -2.37
BRO1YPL084W YPL038W-AQ3E7B4 63 aa0.24□□□□□ -2.37
BRO1YPL084W MIC10Q96VH5 97 aa0.24□□□□□ -2.37
BRO1YPL084W YCR101CP25607 182 aa0.23□□□□□ -2.37
BRO1YPL084W RPA12P32529 125 aaKnown RBP0.23□□□□□ -2.37
BRO1YPL084W YOS1Q3E834 85 aa0.23□□□□□ -2.37
BRO1YPL084W SRB6P32570 121 aa0.22□□□□□ -2.37
BRO1YPL084W GNA1P43577 159 aaPredicted RBP0.22□□□□□ -2.37
BRO1YPL084W RUB1Q03919 77 aa0.22□□□□□ -2.37
BRO1YPL084W COX12Q01519 83 aa0.22□□□□□ -2.37
BRO1YPL084W YMR103CQ04436 120 aa0.21□□□□□ -2.38
BRO1YPL084W LHP1P33399 275 aaKnown RBP0.21□□□□□ -2.38
BRO1YPL084W YNL190WP53872 204 aa0.21□□□□□ -2.38
BRO1YPL084W RPS11AP0CX47 156 aaKnown RBP0.2□□□□□ -2.38
BRO1YPL084W RPS11BP0CX48 156 aaKnown RBP0.2□□□□□ -2.38
BRO1YPL084W UBC4P15731 148 aa0.2□□□□□ -2.38
BRO1YPL084W MRPL38P35996 138 aaPredicted RBP0.18□□□□□ -2.38
BRO1YPL084W MRX7P53869 86 aa0.18□□□□□ -2.38
BRO1YPL084W YCR095W-AQ3E787 52 aa0.18□□□□□ -2.38
BRO1YPL084W YMR090WQ04304 227 aaKnown RBP0.17□□□□□ -2.38
BRO1YPL084W PAU5P43575 122 aa0.17□□□□□ -2.38
BRO1YPL084W RPS12P48589 143 aaKnown RBP0.17□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 99 ms