RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W YLR285C-AQ3E771 56 aa4.49□□□□□ -1.69
VPS5YOR069W UBC11P52492 156 aa4.48□□□□□ -1.69
VPS5YOR069W YJR107C-AP0CT86 78 aa4.48□□□□□ -1.69
VPS5YOR069W SUT1P53032 299 aaKnown RBP4.48□□□□□ -1.69
VPS5YOR069W IRC21Q04772 201 aa4.48□□□□□ -1.69
VPS5YOR069W YOR020W-AQ3E824 90 aa4.47□□□□□ -1.69
VPS5YOR069W RPS28BP0C0X0 67 aaKnown RBP4.46□□□□□ -1.69
VPS5YOR069W MIG3P39943 394 aa4.46□□□□□ -1.69
VPS5YOR069W YMR295CQ03559 197 aa4.46□□□□□ -1.69
VPS5YOR069W COX17Q12287 69 aa4.46□□□□□ -1.69
VPS5YOR069W RPS28AQ3E7X9 67 aaPredicted RBP4.46□□□□□ -1.69
VPS5YOR069W YLR236CA0A023PZG4 107 aa4.46□□□□□ -1.7
VPS5YOR069W RPR2P40571 144 aa4.46□□□□□ -1.7
VPS5YOR069W YLR281CQ05863 155 aa4.46□□□□□ -1.7
VPS5YOR069W RPL11AP0C0W9 174 aaKnown RBP4.45□□□□□ -1.7
VPS5YOR069W COX14P39103 70 aa4.45□□□□□ -1.7
VPS5YOR069W FMP27Q06179 2628 aa4.45□□□□□ -1.7
VPS5YOR069W YLR156WP0CE96 114 aa4.45□□□□□ -1.7
VPS5YOR069W YLR159WP0CE97 114 aa4.45□□□□□ -1.7
VPS5YOR069W YLR161WP0CE98 114 aa4.45□□□□□ -1.7
VPS5YOR069W YRA2P36036 203 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
VPS5YOR069W YFR035CP43608 114 aa4.45□□□□□ -1.7
VPS5YOR069W TOS8P53147 276 aa4.45□□□□□ -1.7
VPS5YOR069W PMP3P87284 55 aa4.45□□□□□ -1.7
VPS5YOR069W EDC1P53080 175 aaPredicted RBP4.44□□□□□ -1.7
VPS5YOR069W YMR244WQ04018 355 aa4.44□□□□□ -1.7
VPS5YOR069W RPL11BQ3E757 174 aaPredicted RBP4.44□□□□□ -1.7
VPS5YOR069W YLL006W-AQ3E814 58 aa4.44□□□□□ -1.7
VPS5YOR069W KTI11Q3E840 82 aa4.44□□□□□ -1.7
VPS5YOR069W BET1P22804 142 aa4.43□□□□□ -1.7
VPS5YOR069W YDR246W-AQ3E763 66 aa4.43□□□□□ -1.7
VPS5YOR069W ERG28P40030 148 aa4.43□□□□□ -1.7
VPS5YOR069W HAL1Q01766 294 aa4.43□□□□□ -1.7
VPS5YOR069W MRPS8Q03799 155 aa4.43□□□□□ -1.7
VPS5YOR069W YMR175W-AQ3E766 64 aa4.43□□□□□ -1.7
VPS5YOR069W YBR219CP38317 127 aa4.42□□□□□ -1.7
VPS5YOR069W ALG13P53178 202 aa4.42□□□□□ -1.7
VPS5YOR069W MPC3P53311 146 aa4.42□□□□□ -1.7
VPS5YOR069W VAM10Q08474 114 aa4.42□□□□□ -1.7
VPS5YOR069W AIM4P38305 123 aaPredicted RBP4.41□□□□□ -1.7
VPS5YOR069W YAR029WP39549 74 aa4.41□□□□□ -1.7
VPS5YOR069W ATP18P81450 59 aa4.41□□□□□ -1.7
VPS5YOR069W ATP20Q12233 115 aa4.41□□□□□ -1.7
VPS5YOR069W YPR117WQ06116 2489 aa4.4□□□□□ -1.7
VPS5YOR069W SPS100P13130 326 aa4.4□□□□□ -1.7
VPS5YOR069W KSH1Q8TGJ3 72 aa4.4□□□□□ -1.7
VPS5YOR069W YIR020CP40575 100 aa4.39□□□□□ -1.71
VPS5YOR069W GAT4P40569 121 aa4.39□□□□□ -1.71
VPS5YOR069W RPL38P49167 78 aaKnown RBP4.39□□□□□ -1.71
VPS5YOR069W HOR7Q05827 59 aa4.39□□□□□ -1.71
VPS5YOR069W UBC4P15731 148 aa4.38□□□□□ -1.71
VPS5YOR069W YGL260WP53056 76 aa4.38□□□□□ -1.71
VPS5YOR069W SRL1Q08673 210 aa4.38□□□□□ -1.71
VPS5YOR069W TMC1Q08422 150 aaPredicted RBP4.38□□□□□ -1.71
VPS5YOR069W RPS11AP0CX47 156 aaKnown RBP4.37□□□□□ -1.71
VPS5YOR069W RPS11BP0CX48 156 aaKnown RBP4.37□□□□□ -1.71
VPS5YOR069W ICY1Q04329 127 aa4.37□□□□□ -1.71
VPS5YOR069W YLR412C-AQ3E742 68 aa4.37□□□□□ -1.71
VPS5YOR069W YKL183C-AQ3E765 70 aa4.37□□□□□ -1.71
VPS5YOR069W RSM19P53733 91 aaPredicted RBP4.36□□□□□ -1.71
VPS5YOR069W ERI1P62651 68 aaKnown RBP4.36□□□□□ -1.71
VPS5YOR069W SPG4Q04438 115 aa4.36□□□□□ -1.71
VPS5YOR069W YFR009W-AP0C5M9 85 aa4.36□□□□□ -1.71
VPS5YOR069W TAR1Q8TGM6 124 aa4.36□□□□□ -1.71
VPS5YOR069W RSM18P40033 138 aa4.35□□□□□ -1.71
VPS5YOR069W YFL019CP43576 117 aa4.35□□□□□ -1.71
VPS5YOR069W YGR164WP53291 111 aa4.35□□□□□ -1.71
VPS5YOR069W TDA2P40045 126 aa4.34□□□□□ -1.71
VPS5YOR069W TIM10P87108 93 aa4.34□□□□□ -1.71
VPS5YOR069W TSC3Q3E790 80 aa4.34□□□□□ -1.71
VPS5YOR069W TDA8Q6B2U8 126 aa4.34□□□□□ -1.71
VPS5YOR069W YAL065CO13511 128 aa4.34□□□□□ -1.71
VPS5YOR069W YPS5P53057 165 aa4.34□□□□□ -1.71
VPS5YOR069W NOP10Q6Q547 58 aaPredicted RBP4.34□□□□□ -1.71
VPS5YOR069W YMR320WQ04897 101 aa4.33□□□□□ -1.72
VPS5YOR069W YOR314WQ12506 109 aa4.33□□□□□ -1.72
VPS5YOR069W RTG1P32607 177 aa4.33□□□□□ -1.72
VPS5YOR069W YMR122W-AQ3E842 84 aa4.33□□□□□ -1.72
VPS5YOR069W IRA1P18963 3092 aa4.32□□□□□ -1.72
VPS5YOR069W CRC1Q12289 327 aa4.32□□□□□ -1.72
VPS5YOR069W RPL29P05747 59 aaPredicted RBP4.31□□□□□ -1.72
VPS5YOR069W YPL278CQ08990 100 aa4.31□□□□□ -1.72
VPS5YOR069W SMD1Q02260 146 aaPredicted RBP4.31□□□□□ -1.72
VPS5YOR069W MVB12P42939 101 aa4.29□□□□□ -1.72
VPS5YOR069W SPO24Q3E752 67 aa4.29□□□□□ -1.72
VPS5YOR069W TRA1P38811 3744 aa4.29□□□□□ -1.72
VPS5YOR069W RPL36BO14455 100 aaKnown RBP4.29□□□□□ -1.72
VPS5YOR069W RPL36AP05745 100 aaPredicted RBP4.29□□□□□ -1.72
VPS5YOR069W SFT1P43682 97 aa4.29□□□□□ -1.72
VPS5YOR069W ICS3P47034 131 aa4.29□□□□□ -1.72
VPS5YOR069W YDR182W-AQ3E796 67 aa4.29□□□□□ -1.72
VPS5YOR069W RPL26AP05743 127 aaKnown RBP4.28□□□□□ -1.72
VPS5YOR069W RPL26BP53221 127 aaKnown RBP4.28□□□□□ -1.72
VPS5YOR069W YOR268CQ08734 132 aa4.28□□□□□ -1.72
VPS5YOR069W YDL241WQ07738 123 aa4.28□□□□□ -1.73
VPS5YOR069W RRT15Q3E811 62 aa4.28□□□□□ -1.73
VPS5YOR069W YLR162WQ06235 118 aa4.27□□□□□ -1.73
VPS5YOR069W YOL166W-AQ8TGJ1 51 aa4.27□□□□□ -1.73
VPS5YOR069W YHL005CP38752 130 aa4.26□□□□□ -1.73
VPS5YOR069W YOL014WQ08110 124 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms