RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C AIM4P38305 123 aaPredicted RBP2.17□□□□□ -2.06
TOP1YOL006C MIX17Q03667 156 aa2.17□□□□□ -2.06
TOP1YOL006C VAM10Q08474 114 aa2.17□□□□□ -2.06
TOP1YOL006C YHR214C-DP0CX93 97 aa2.16□□□□□ -2.06
TOP1YOL006C YBR292CP38357 123 aa2.16□□□□□ -2.06
TOP1YOL006C YIL163CP40448 117 aa2.16□□□□□ -2.06
TOP1YOL006C YMR122CQ03879 124 aa2.16□□□□□ -2.06
TOP1YOL006C YOL131WQ08270 108 aa2.16□□□□□ -2.06
TOP1YOL006C YOR343CQ12484 108 aa2.16□□□□□ -2.06
TOP1YOL006C IML1P47170 1584 aa2.16□□□□□ -2.06
TOP1YOL006C SPC1P46965 94 aa2.16□□□□□ -2.06
TOP1YOL006C PDR5P33302 1511 aaKnown RBP2.15□□□□□ -2.06
TOP1YOL006C PDR12Q02785 1511 aa2.15□□□□□ -2.07
TOP1YOL006C MRPL38P35996 138 aaPredicted RBP2.15□□□□□ -2.07
TOP1YOL006C YEL008WP40001 126 aa2.15□□□□□ -2.07
TOP1YOL006C SNA2P56508 79 aa2.15□□□□□ -2.07
TOP1YOL006C UBR2Q07963 1872 aa2.15□□□□□ -2.07
TOP1YOL006C STU1P38198 1513 aa2.15□□□□□ -2.07
TOP1YOL006C VPS55P47111 140 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-LR1P0C2J3 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-FP0CX63 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-GR2P0CX64 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-CP25384 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-DR2Q03494 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-DR3Q07791 1770 aaKnown RBP2.14□□□□□ -2.07
TOP1YOL006C TY2B-OR1Q12113 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-DR1Q12472 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-BQ12491 1770 aa2.14□□□□□ -2.07
TOP1YOL006C TY2B-OR2Q12501 1770 aa2.14□□□□□ -2.07
TOP1YOL006C YPL038W-AQ3E7B4 63 aa2.13□□□□□ -2.07
TOP1YOL006C RPO21P04050 1733 aaKnown RBP2.13□□□□□ -2.07
TOP1YOL006C YSF3P0C074 85 aaPredicted RBP2.13□□□□□ -2.07
TOP1YOL006C PAU23Q07987 124 aa2.13□□□□□ -2.07
TOP1YOL006C PAU17Q12370 124 aa2.13□□□□□ -2.07
TOP1YOL006C YBL071CP38185 102 aa2.12□□□□□ -2.07
TOP1YOL006C IRC21Q04772 201 aa2.12□□□□□ -2.07
TOP1YOL006C YFL041W-AQ3E817 63 aa2.12□□□□□ -2.07
TOP1YOL006C GCN2P15442 1659 aa2.12□□□□□ -2.07
TOP1YOL006C CYR1P08678 2026 aaKnown RBP2.12□□□□□ -2.07
TOP1YOL006C GCN1P33892 2672 aaKnown RBP2.12□□□□□ -2.07
TOP1YOL006C BUD3P25558 1636 aa2.12□□□□□ -2.07
TOP1YOL006C FKS3Q04952 1785 aa2.12□□□□□ -2.07
TOP1YOL006C YPR096CO13587 100 aa2.11□□□□□ -2.07
TOP1YOL006C MRX7P53869 86 aa2.11□□□□□ -2.07
TOP1YOL006C CCW14O13547 238 aa2.11□□□□□ -2.07
TOP1YOL006C PAU6P0CE90 120 aa2.11□□□□□ -2.07
TOP1YOL006C PAU18P0CE91 120 aa2.11□□□□□ -2.07
TOP1YOL006C YNL198CP40166 100 aa2.1□□□□□ -2.07
TOP1YOL006C YOR105WQ08504 108 aa2.1□□□□□ -2.07
TOP1YOL006C CCW12Q12127 133 aa2.1□□□□□ -2.07
TOP1YOL006C YOR314WQ12506 109 aa2.1□□□□□ -2.07
TOP1YOL006C YGL041C-BQ3E750 60 aa2.1□□□□□ -2.07
TOP1YOL006C COA3Q3E7B2 85 aa2.1□□□□□ -2.07
TOP1YOL006C PMD1P32634 1753 aa2.1□□□□□ -2.07
TOP1YOL006C VMR1P38735 1592 aa2.1□□□□□ -2.07
TOP1YOL006C YCL042WP25572 119 aa2.09□□□□□ -2.07
TOP1YOL006C TAO3P40468 2376 aa2.09□□□□□ -2.07
TOP1YOL006C TEL1P38110 2787 aa2.09□□□□□ -2.07
TOP1YOL006C YBR219CP38317 127 aa2.09□□□□□ -2.07
TOP1YOL006C YLR162WQ06235 118 aa2.09□□□□□ -2.07
TOP1YOL006C YIL134C-AQ45U18 67 aa2.09□□□□□ -2.07
TOP1YOL006C YER188C-AP0C0V2 99 aa2.08□□□□□ -2.08
TOP1YOL006C PDX3P38075 228 aaKnown RBP2.08□□□□□ -2.08
TOP1YOL006C MPC2P38857 129 aa2.08□□□□□ -2.08
TOP1YOL006C LCL2Q08045 131 aa2.08□□□□□ -2.08
TOP1YOL006C YKL065W-AQ2V2P2 73 aa2.08□□□□□ -2.08
TOP1YOL006C YBT1P32386 1661 aa2.08□□□□□ -2.08
TOP1YOL006C YDR210WQ03482 75 aa2.08□□□□□ -2.08
TOP1YOL006C YNL146C-AQ3E7Z1 64 aa2.08□□□□□ -2.08
TOP1YOL006C MRPS12P53732 153 aa2.07□□□□□ -2.08
TOP1YOL006C VMA9Q3E7B6 73 aa2.07□□□□□ -2.08
TOP1YOL006C SNQ2P32568 1501 aaKnown RBP2.07□□□□□ -2.08
TOP1YOL006C YAL065CO13511 128 aa2.07□□□□□ -2.08
TOP1YOL006C TIM12P32830 109 aa2.07□□□□□ -2.08
TOP1YOL006C BSC4P53841 131 aa2.07□□□□□ -2.08
TOP1YOL006C COX12Q01519 83 aa2.07□□□□□ -2.08
TOP1YOL006C YNR034W-AQ3E841 98 aa2.07□□□□□ -2.08
TOP1YOL006C TY4B-JP47024 1803 aa2.07□□□□□ -2.08
TOP1YOL006C STT4P37297 1900 aa2.06□□□□□ -2.08
TOP1YOL006C YGR121W-AQ3E816 71 aa2.06□□□□□ -2.08
TOP1YOL006C PRM7Q12459 698 aa2.06□□□□□ -2.08
TOP1YOL006C YGR240C-AQ3E786 66 aa2.06□□□□□ -2.08
TOP1YOL006C TOM1Q03280 3268 aa2.06□□□□□ -2.08
TOP1YOL006C SLH1P53327 1967 aaKnown RBP2.05□□□□□ -2.08
TOP1YOL006C AIM19P40502 157 aa2.05□□□□□ -2.08
TOP1YOL006C YHR086W-AQ3E746 53 aa2.05□□□□□ -2.08
TOP1YOL006C TOR2P32600 2474 aaKnown RBP2.05□□□□□ -2.08
TOP1YOL006C TY4B-HP0C2J7 1802 aa2.05□□□□□ -2.08
TOP1YOL006C PAU4P53427 120 aa2.05□□□□□ -2.08
TOP1YOL006C YDR010CQ12426 110 aa2.05□□□□□ -2.08
TOP1YOL006C PRP8P33334 2413 aaKnown RBP2.04□□□□□ -2.08
TOP1YOL006C PAU1P0CE88 120 aa2.04□□□□□ -2.08
TOP1YOL006C PAU14P0CE89 120 aa2.04□□□□□ -2.08
TOP1YOL006C PAU8P0CE92 120 aa2.04□□□□□ -2.08
TOP1YOL006C PAU11P0CE93 120 aa2.04□□□□□ -2.08
TOP1YOL006C MRPL31P14063 131 aaPredicted RBP2.04□□□□□ -2.08
TOP1YOL006C PAU13P38725 120 aa2.04□□□□□ -2.08
TOP1YOL006C PAU10Q03050 120 aa2.04□□□□□ -2.08
TOP1YOL006C COX19Q3E731 98 aa2.04□□□□□ -2.08
TOP1YOL006C PAU9Q3E770 120 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms