RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeastyeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC7YNL054W VPS13Q07878 3144 aa3.3□□□□□ -1.88
VAC7YNL054W CCW14O13547 238 aa3.3□□□□□ -1.88
VAC7YNL054W SUT1P53032 299 aaKnown RBP3.3□□□□□ -1.88
VAC7YNL054W YGR045CP53229 120 aa3.29□□□□□ -1.88
VAC7YNL054W RSM19P53733 91 aaPredicted RBP3.29□□□□□ -1.88
VAC7YNL054W SHH4Q06236 168 aa3.29□□□□□ -1.88
VAC7YNL054W RPS26AP39938 119 aaKnown RBP3.29□□□□□ -1.88
VAC7YNL054W POR2P40478 281 aa3.29□□□□□ -1.88
VAC7YNL054W YJL027CP47063 138 aaPredicted RBP3.29□□□□□ -1.88
VAC7YNL054W YOR381W-AQ3E804 55 aa3.29□□□□□ -1.88
VAC7YNL054W TDA2P40045 126 aa3.28□□□□□ -1.88
VAC7YNL054W YIL102CP40488 101 aa3.28□□□□□ -1.88
VAC7YNL054W YJR146WP47174 117 aa3.28□□□□□ -1.88
VAC7YNL054W TIM10P87108 93 aa3.28□□□□□ -1.88
VAC7YNL054W YNL277W-AQ3E7Z0 62 aa3.28□□□□□ -1.88
VAC7YNL054W YIL046W-AQ3E7Z4 54 aa3.28□□□□□ -1.88
VAC7YNL054W RPL26AP05743 127 aaKnown RBP3.28□□□□□ -1.88
VAC7YNL054W RPL26BP53221 127 aaKnown RBP3.28□□□□□ -1.88
VAC7YNL054W ERI1P62651 68 aaKnown RBP3.28□□□□□ -1.88
VAC7YNL054W QCR8P08525 94 aa3.28□□□□□ -1.88
VAC7YNL054W RPS23AP0CX29 145 aaKnown RBP3.28□□□□□ -1.88
VAC7YNL054W RPS23BP0CX30 145 aa3.28□□□□□ -1.88
VAC7YNL054W YIR020CP40575 100 aa3.28□□□□□ -1.88
VAC7YNL054W MRPS12P53732 153 aa3.28□□□□□ -1.88
VAC7YNL054W UTH1P36135 365 aa3.27□□□□□ -1.89
VAC7YNL054W YEL008WP40001 126 aa3.27□□□□□ -1.89
VAC7YNL054W YGR219WP53307 113 aa3.27□□□□□ -1.89
VAC7YNL054W MIC10Q96VH5 97 aa3.27□□□□□ -1.89
VAC7YNL054W YBL081WP38180 368 aaKnown RBP3.27□□□□□ -1.89
VAC7YNL054W MIG3P39943 394 aa3.27□□□□□ -1.89
VAC7YNL054W ARC15P40518 154 aaRIP-Chip data3.27□□□□□ -1.89not detected
VAC7YNL054W RGM1Q00453 211 aa3.27□□□□□ -1.89
VAC7YNL054W IRA2P19158 3079 aa3.26□□□□□ -1.89
VAC7YNL054W YBR200W-AQ3E755 54 aa3.26□□□□□ -1.89
VAC7YNL054W TSC3Q3E790 80 aa3.26□□□□□ -1.89
VAC7YNL054W YOR032W-AQ8TGS1 66 aa3.26□□□□□ -1.89
VAC7YNL054W MSA2P36157 363 aa3.26□□□□□ -1.89
VAC7YNL054W PEX22P39718 180 aa3.26□□□□□ -1.89
VAC7YNL054W MPC3P53311 146 aa3.26□□□□□ -1.89
VAC7YNL054W MLF3P32047 452 aa3.25□□□□□ -1.89
VAC7YNL054W YOR376W-AQ3E805 51 aa3.25□□□□□ -1.89
VAC7YNL054W SPS100P13130 326 aa3.25□□□□□ -1.89
VAC7YNL054W UBC4P15731 148 aa3.25□□□□□ -1.89
VAC7YNL054W ICS3P47034 131 aa3.25□□□□□ -1.89
VAC7YNL054W YLR412C-AQ3E742 68 aa3.25□□□□□ -1.89
VAC7YNL054W PRP8P33334 2413 aaKnown RBP3.25□□□□□ -1.89
VAC7YNL054W RSM18P40033 138 aa3.25□□□□□ -1.89
VAC7YNL054W YCL048W-AQ2V2Q2 79 aa3.25□□□□□ -1.89
VAC7YNL054W NOP10Q6Q547 58 aaPredicted RBP3.25□□□□□ -1.89
VAC7YNL054W WWM1P43582 211 aaKnown RBP3.24□□□□□ -1.89
VAC7YNL054W YFR035CP43608 114 aa3.24□□□□□ -1.89
VAC7YNL054W YER135CP40082 130 aa3.24□□□□□ -1.89
VAC7YNL054W YOR314WQ12506 109 aa3.24□□□□□ -1.89
VAC7YNL054W YMR175W-AQ3E766 64 aa3.24□□□□□ -1.89
VAC7YNL054W RPB10P22139 70 aa3.24□□□□□ -1.89
VAC7YNL054W HOT13P36078 116 aa3.24□□□□□ -1.89
VAC7YNL054W YHL005CP38752 130 aa3.24□□□□□ -1.89
VAC7YNL054W SMD1Q02260 146 aaPredicted RBP3.24□□□□□ -1.89
VAC7YNL054W FMP27Q06179 2628 aa3.23□□□□□ -1.89
VAC7YNL054W SPG4Q04438 115 aa3.23□□□□□ -1.89
VAC7YNL054W MMS2P53152 137 aa3.23□□□□□ -1.89
VAC7YNL054W YLL006W-AQ3E814 58 aa3.23□□□□□ -1.89
VAC7YNL054W PMP3P87284 55 aa3.22□□□□□ -1.89
VAC7YNL054W ATP18P81450 59 aa3.22□□□□□ -1.89
VAC7YNL054W SED1Q01589 338 aa3.22□□□□□ -1.89
VAC7YNL054W DIF1O13577 133 aa3.21□□□□□ -1.89
VAC7YNL054W SPC1P46965 94 aa3.21□□□□□ -1.89
VAC7YNL054W TDA8Q6B2U8 126 aa3.21□□□□□ -1.9
VAC7YNL054W YGR164WP53291 111 aa3.21□□□□□ -1.9
VAC7YNL054W SPT4P32914 102 aaPredicted RBP3.2□□□□□ -1.9
VAC7YNL054W TOS8P53147 276 aa3.2□□□□□ -1.9
VAC7YNL054W RPS30AP0CX33 63 aaKnown RBP3.2□□□□□ -1.9
VAC7YNL054W RPS30BP0CX34 63 aaKnown RBP3.2□□□□□ -1.9
VAC7YNL054W YDR274CP87283 123 aa3.2□□□□□ -1.9
VAC7YNL054W CCW12Q12127 133 aa3.2□□□□□ -1.9
VAC7YNL054W OST5Q92316 86 aa3.2□□□□□ -1.9
VAC7YNL054W YNL046WP53956 172 aa3.2□□□□□ -1.9
VAC7YNL054W YOR020W-AQ3E824 90 aa3.19□□□□□ -1.9
VAC7YNL054W YGL034CP53186 121 aa3.19□□□□□ -1.9
VAC7YNL054W SRL1Q08673 210 aa3.19□□□□□ -1.9
VAC7YNL054W YDR246W-AQ3E763 66 aa3.19□□□□□ -1.9
VAC7YNL054W RPR2P40571 144 aa3.18□□□□□ -1.9
VAC7YNL054W VAM10Q08474 114 aa3.18□□□□□ -1.9
VAC7YNL054W CRC1Q12289 327 aa3.18□□□□□ -1.9
VAC7YNL054W SAP30P38429 201 aa3.18□□□□□ -1.9
VAC7YNL054W YMR122CQ03879 124 aa3.18□□□□□ -1.9
VAC7YNL054W AIR2Q12476 344 aaKnown RBP3.18□□□□□ -1.9
VAC7YNL054W COX14P39103 70 aa3.17□□□□□ -1.9
VAC7YNL054W UTP20P35194 2493 aaKnown RBP3.17□□□□□ -1.9
VAC7YNL054W RPS11AP0CX47 156 aaKnown RBP3.17□□□□□ -1.9
VAC7YNL054W RPS11BP0CX48 156 aaKnown RBP3.17□□□□□ -1.9
VAC7YNL054W YPR153WQ06537 140 aa3.17□□□□□ -1.9
VAC7YNL054W YLR236CA0A023PZG4 107 aa3.16□□□□□ -1.9
VAC7YNL054W RPL36BO14455 100 aaKnown RBP3.16□□□□□ -1.9
VAC7YNL054W RPL36AP05745 100 aaPredicted RBP3.16□□□□□ -1.9
VAC7YNL054W YFR009W-AP0C5M9 85 aa3.16□□□□□ -1.9
VAC7YNL054W LIP1Q03579 150 aa3.16□□□□□ -1.9
VAC7YNL054W YPR013CQ12145 317 aa3.16□□□□□ -1.9
VAC7YNL054W YBR219CP38317 127 aa3.15□□□□□ -1.9
VAC7YNL054W YPR117WQ06116 2489 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 83.3 ms