RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W TOM6P33448 61 aa0.1□□□□□ -2.39
DDR48YMR173W YBR201C-AQ2V2Q3 67 aa0.1□□□□□ -2.39
DDR48YMR173W MHF2Q3E829 80 aa0.1□□□□□ -2.39
DDR48YMR173W PDR11P40550 1411 aa0.1□□□□□ -2.39
DDR48YMR173W MDS3P53094 1487 aa0.1□□□□□ -2.39
DDR48YMR173W MSL1P40567 111 aaPredicted RBP0.09□□□□□ -2.4
DDR48YMR173W BSC4P53841 131 aa0.09□□□□□ -2.4
DDR48YMR173W ZEO1Q08245 113 aa0.09□□□□□ -2.4
DDR48YMR173W CAT8P39113 1433 aa0.09□□□□□ -2.4
DDR48YMR173W RSF2P46974 1380 aa0.08□□□□□ -2.4
DDR48YMR173W BPT1P14772 1559 aa0.08□□□□□ -2.4
DDR48YMR173W YDR029WQ12111 104 aa0.08□□□□□ -2.4
DDR48YMR173W REV3P14284 1504 aa0.08□□□□□ -2.4
DDR48YMR173W YDR381C-AQ3E6R5 114 aa0.07□□□□□ -2.4
DDR48YMR173W SDH6Q3E785 79 aa0.07□□□□□ -2.4
DDR48YMR173W RRT15Q3E811 62 aa0.06□□□□□ -2.4
DDR48YMR173W YKL068W-AQ3E826 78 aa0.06□□□□□ -2.4
DDR48YMR173W YAL065CO13511 128 aa0.05□□□□□ -2.4
DDR48YMR173W FPR2P32472 135 aa0.05□□□□□ -2.4
DDR48YMR173W ATP18P81450 59 aa0.05□□□□□ -2.4
DDR48YMR173W NHP2P32495 156 aaPredicted RBP0.04□□□□□ -2.4
DDR48YMR173W YPL225WQ08971 146 aaKnown RBP0.04□□□□□ -2.4
DDR48YMR173W YCL001W-BQ96VH2 84 aa0.04□□□□□ -2.4
DDR48YMR173W YMR122W-AQ3E842 84 aa0.03□□□□□ -2.4
DDR48YMR173W TY1B-BRQ12193 1756 aa0.03□□□□□ -2.4
DDR48YMR173W YCR085WP25650 117 aa0.02□□□□□ -2.41
DDR48YMR173W YDR042CQ03205 200 aa0.02□□□□□ -2.41
DDR48YMR173W PAU23Q07987 124 aa0.02□□□□□ -2.41
DDR48YMR173W SCP1Q08873 200 aa0.02□□□□□ -2.41
DDR48YMR173W PAU17Q12370 124 aa0.02□□□□□ -2.41
DDR48YMR173W YCR108CQ3E819 63 aa0.02□□□□□ -2.41
DDR48YMR173W YGR025WP53216 100 aa0.01□□□□□ -2.41
DDR48YMR173W YPR108W-AQ3E7B3 70 aa0.01□□□□□ -2.41
DDR48YMR173W RPA190P10964 1664 aaKnown RBP0.01□□□□□ -2.41
DDR48YMR173W TY1B-LR3P0C2I6 1755 aaKnown RBP0.01□□□□□ -2.41
DDR48YMR173W TY1B-PR3P0C2J1 1755 aaKnown RBP0.01□□□□□ -2.41
DDR48YMR173W ECM12O13529 151 aa0□□□□□ -2.41
DDR48YMR173W YBR032WP38223 100 aa0□□□□□ -2.41
DDR48YMR173W HKR1P41809 1802 aa0□□□□□ -2.41
DDR48YMR173W EDC1P53080 175 aaPredicted RBP0□□□□□ -2.41
DDR48YMR173W YDR246W-AQ3E763 66 aa0□□□□□ -2.41
DDR48YMR173W YOL097W-AQ3E7Y9 61 aa0□□□□□ -2.41
DDR48YMR173W DNF3Q12674 1656 aa-0.01□□□□□ -2.41
DDR48YMR173W TY1B-PR2P0C2J0 1756 aa-0.02□□□□□ -2.41
DDR48YMR173W YOR105WQ08504 108 aa-0.04□□□□□ -2.42
DDR48YMR173W GDB1Q06625 1536 aa-0.04□□□□□ -2.42
DDR48YMR173W POL1P13382 1468 aa-0.04□□□□□ -2.42
DDR48YMR173W MOT1P32333 1867 aa-0.05□□□□□ -2.42
DDR48YMR173W ECM29P38737 1868 aa-0.05□□□□□ -2.42
DDR48YMR173W YCR075W-AQ3E830 75 aa-0.05□□□□□ -2.42
DDR48YMR173W NOP10Q6Q547 58 aaPredicted RBP-0.05□□□□□ -2.42
DDR48YMR173W SWR1Q05471 1514 aa-0.05□□□□□ -2.42
DDR48YMR173W BPH1P25356 2167 aa-0.05□□□□□ -2.42
DDR48YMR173W STT4P37297 1900 aa-0.05□□□□□ -2.42
DDR48YMR173W TY1B-DR6P0C2I3 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-LR2P0C2I5 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-JR2P47100 1755 aaKnown RBP-0.06□□□□□ -2.42
DDR48YMR173W TY1B-MR1Q04214 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-MR2Q04670 1755 aaKnown RBP-0.06□□□□□ -2.42
DDR48YMR173W TY1B-NL1Q12112 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-GR1Q12141 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-GR3Q12316 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W TY1B-PLQ12414 1755 aaKnown RBP-0.06□□□□□ -2.42
DDR48YMR173W TY1B-ORQ92393 1755 aa-0.06□□□□□ -2.42
DDR48YMR173W YOR343CQ12484 108 aa-0.06□□□□□ -2.42
DDR48YMR173W YBL044WP38194 122 aa-0.07□□□□□ -2.42
DDR48YMR173W YMR082CQ04276 118 aa-0.08□□□□□ -2.42
DDR48YMR173W YMR001C-AQ8TGS9 76 aa-0.08□□□□□ -2.42
DDR48YMR173W YKL065W-AQ2V2P2 73 aa-0.09□□□□□ -2.42
DDR48YMR173W SEN1Q00416 2231 aaKnown RBP-0.09□□□□□ -2.42
DDR48YMR173W PMD1P32634 1753 aa-0.09□□□□□ -2.42
DDR48YMR173W MMS1Q06211 1407 aa-0.1□□□□□ -2.43
DDR48YMR173W RPS29AP41057 56 aaKnown RBP-0.1□□□□□ -2.43
DDR48YMR173W YIL156W-BQ2V2P4 73 aa-0.1□□□□□ -2.43
DDR48YMR173W PDR10P51533 1564 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-DR5P0C2I2 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.11□□□□□ -2.43
DDR48YMR173W TY1B-JR1P47098 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-ML2Q03434 1755 aaKnown RBP-0.11□□□□□ -2.43
DDR48YMR173W TY1B-ER1Q03612 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-ER2Q03619 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-DR1Q03855 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-ML1Q04711 1755 aaKnown RBP-0.11□□□□□ -2.43
DDR48YMR173W TY1B-LR1Q12088 1755 aaKnown RBP-0.11□□□□□ -2.43
DDR48YMR173W TY1B-GR2Q12269 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-OLQ12273 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W TY1B-DR3Q99231 1755 aa-0.11□□□□□ -2.43
DDR48YMR173W YMR175W-AQ3E766 64 aa-0.11□□□□□ -2.43
DDR48YMR173W YLR146W-AQ2V2P1 62 aa-0.12□□□□□ -2.43
DDR48YMR173W YOR008C-AQ3E7B9 74 aa-0.12□□□□□ -2.43
DDR48YMR173W CWP2P43497 92 aa-0.13□□□□□ -2.43
DDR48YMR173W OLI1P61829 76 aa-0.13□□□□□ -2.43
DDR48YMR173W YGL194C-AQ2V2P6 80 aa-0.13□□□□□ -2.43
DDR48YMR173W YKL018C-AQ3E7A7 99 aa-0.13□□□□□ -2.43
DDR48YMR173W UTP10P42945 1769 aaKnown RBP-0.14□□□□□ -2.43
DDR48YMR173W SIP18P50263 79 aa-0.14□□□□□ -2.43
DDR48YMR173W YOR314WQ12506 109 aa-0.14□□□□□ -2.43
DDR48YMR173W XRN1P22147 1528 aaKnown RBP-0.14□□□□□ -2.43
DDR48YMR173W LSM2P38203 95 aaKnown RBP-0.15□□□□□ -2.43
DDR48YMR173W YPR145C-AQ2V2P0 78 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms