RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YGR240C-AQ3E786 66 aa2.13□□□□□ -2.07
ATG17YLR423C PCC1Q3E833 88 aa2.13□□□□□ -2.07
ATG17YLR423C ENV10Q99382 181 aa2.13□□□□□ -2.07
ATG17YLR423C SRX1P36077 127 aa2.12□□□□□ -2.07
ATG17YLR423C YMR321CQ04898 105 aa2.12□□□□□ -2.07
ATG17YLR423C TRA1P38811 3744 aa2.11□□□□□ -2.07
ATG17YLR423C YOR304C-AO14468 76 aa2.11□□□□□ -2.07
ATG17YLR423C ADK1P07170 222 aaKnown RBP2.11□□□□□ -2.07
ATG17YLR423C RPL43AP0CX25 92 aaKnown RBP2.11□□□□□ -2.07
ATG17YLR423C RPL43BP0CX26 92 aa2.11□□□□□ -2.07
ATG17YLR423C ARL3Q02804 198 aa2.11□□□□□ -2.07
ATG17YLR423C DAD1Q12248 94 aa2.11□□□□□ -2.07
ATG17YLR423C YOR034C-AQ3E735 80 aa2.11□□□□□ -2.07
ATG17YLR423C COX23P38824 151 aa2.1□□□□□ -2.07
ATG17YLR423C YLR365WQ7LIF2 110 aa2.1□□□□□ -2.07
ATG17YLR423C LAA1P39526 2014 aa2.1□□□□□ -2.07
ATG17YLR423C YIR020CP40575 100 aa2.09□□□□□ -2.07
ATG17YLR423C GTT1P40582 234 aa2.09□□□□□ -2.07
ATG17YLR423C YDR524C-BQ3E6R4 66 aa2.09□□□□□ -2.07
ATG17YLR423C SNN1P48232 102 aa2.08□□□□□ -2.08
ATG17YLR423C CYB5P40312 120 aa2.07□□□□□ -2.08
ATG17YLR423C CSF1Q12150 2958 aa2.06□□□□□ -2.08
ATG17YLR423C YLR363W-AQ3E747 85 aa2.06□□□□□ -2.08
ATG17YLR423C YLR285C-AQ3E771 56 aa2.06□□□□□ -2.08
ATG17YLR423C YER039C-AP0CD97 72 aa2.04□□□□□ -2.08
ATG17YLR423C YJR128WP47162 119 aa2.03□□□□□ -2.08
ATG17YLR423C YGR164WP53291 111 aa2.02□□□□□ -2.09
ATG17YLR423C YLR307C-AQ3E825 87 aa2.01□□□□□ -2.09
ATG17YLR423C PAU2P32612 120 aa2□□□□□ -2.09
ATG17YLR423C PAU24P38155 120 aa2□□□□□ -2.09
ATG17YLR423C YEA6P39953 335 aa2□□□□□ -2.09
ATG17YLR423C RUB1Q03919 77 aa2□□□□□ -2.09
ATG17YLR423C YLR157W-EP0CF00 54 aa1.97□□□□□ -2.09
ATG17YLR423C HUR1P45820 110 aa1.97□□□□□ -2.09
ATG17YLR423C SWC7Q06707 132 aa1.97□□□□□ -2.09
ATG17YLR423C VPS55P47111 140 aa1.96□□□□□ -2.1
ATG17YLR423C LCL1Q02786 101 aa1.96□□□□□ -2.1
ATG17YLR423C YCL048W-AQ2V2Q2 79 aa1.95□□□□□ -2.1
ATG17YLR423C PAU19P0CE85 124 aa1.94□□□□□ -2.1
ATG17YLR423C HMRA2P0CY13 119 aa1.94□□□□□ -2.1
ATG17YLR423C PAU3P25610 124 aa1.94□□□□□ -2.1
ATG17YLR423C VMA21P41806 77 aa1.94□□□□□ -2.1
ATG17YLR423C MRPS12P53732 153 aa1.94□□□□□ -2.1
ATG17YLR423C YBR056W-AI2HB52 66 aa1.93□□□□□ -2.1
ATG17YLR423C BRR2P32639 2163 aaKnown RBP1.93□□□□□ -2.1
ATG17YLR423C DYN1P36022 4092 aa1.93□□□□□ -2.1
ATG17YLR423C SEC16P48415 2195 aaKnown RBP1.92□□□□□ -2.1
ATG17YLR423C GNA1P43577 159 aaPredicted RBP1.91□□□□□ -2.1
ATG17YLR423C MEC1P38111 2368 aa1.9□□□□□ -2.11
ATG17YLR423C MDN1Q12019 4910 aaKnown RBP1.89□□□□□ -2.11
ATG17YLR423C LHP1P33399 275 aaKnown RBP1.88□□□□□ -2.11
ATG17YLR423C RPS12P48589 143 aaKnown RBP1.85□□□□□ -2.11
ATG17YLR423C LSM6Q06406 86 aaKnown RBP1.85□□□□□ -2.11
ATG17YLR423C YHR138CP38841 114 aaPredicted RBP1.84□□□□□ -2.11
ATG17YLR423C YOS1Q3E834 85 aa1.84□□□□□ -2.11
ATG17YLR423C POL2P21951 2222 aaKnown RBP1.83□□□□□ -2.12
ATG17YLR423C YER137CP40083 148 aaKnown RBP1.83□□□□□ -2.12
ATG17YLR423C BUD23P25627 275 aaPredicted RBP1.82□□□□□ -2.12
ATG17YLR423C YIL046W-AQ3E7Z4 54 aa1.82□□□□□ -2.12
ATG17YLR423C PAU16P35994 123 aa1.81□□□□□ -2.12
ATG17YLR423C PAU15P40585 124 aa1.81□□□□□ -2.12
ATG17YLR423C YMR103CQ04436 120 aa1.81□□□□□ -2.12
ATG17YLR423C STT4P37297 1900 aa1.8□□□□□ -2.12
ATG17YLR423C YOL118CQ08259 102 aa1.8□□□□□ -2.12
ATG17YLR423C CCW14O13547 238 aa1.79□□□□□ -2.12
ATG17YLR423C RGI1P40043 161 aaPredicted RBP1.79□□□□□ -2.12
ATG17YLR423C YCR101CP25607 182 aa1.78□□□□□ -2.12
ATG17YLR423C MIC10Q96VH5 97 aa1.78□□□□□ -2.12
ATG17YLR423C YBR090CP38253 122 aa1.77□□□□□ -2.13
ATG17YLR423C IMP2P46972 177 aa1.77□□□□□ -2.13
ATG17YLR423C YMR090WQ04304 227 aaKnown RBP1.77□□□□□ -2.13
ATG17YLR423C UBC4P15731 148 aa1.76□□□□□ -2.13
ATG17YLR423C UBC5P15732 148 aa1.75□□□□□ -2.13
ATG17YLR423C AUA1P32450 94 aa1.74□□□□□ -2.13
ATG17YLR423C SRB6P32570 121 aa1.73□□□□□ -2.13
ATG17YLR423C URA2P07259 2214 aaKnown RBP1.72□□□□□ -2.13
ATG17YLR423C YDR010CQ12426 110 aa1.72□□□□□ -2.13
ATG17YLR423C YLR255CO13574 117 aa1.71□□□□□ -2.14
ATG17YLR423C YIL086CP40503 102 aa1.71□□□□□ -2.14
ATG17YLR423C YDR210WQ03482 75 aa1.71□□□□□ -2.14
ATG17YLR423C YBR072C-AQ3E794 53 aa1.7□□□□□ -2.14
ATG17YLR423C COX19Q3E731 98 aa1.69□□□□□ -2.14
ATG17YLR423C SHU1P38751 150 aa1.66□□□□□ -2.14
ATG17YLR423C GCV3P39726 170 aaPredicted RBP1.66□□□□□ -2.14
ATG17YLR423C MIX14Q04341 121 aa1.66□□□□□ -2.14
ATG17YLR423C YPL038W-AQ3E7B4 63 aa1.66□□□□□ -2.14
ATG17YLR423C YHR173CP38864 112 aa1.64□□□□□ -2.15
ATG17YLR423C COX12Q01519 83 aa1.63□□□□□ -2.15
ATG17YLR423C MPC2P38857 129 aa1.59□□□□□ -2.15
ATG17YLR423C FYV7Q12247 151 aa1.59□□□□□ -2.15
ATG17YLR423C BLM10P43583 2143 aa1.58□□□□□ -2.16
ATG17YLR423C YCR095W-AQ3E787 52 aa1.58□□□□□ -2.16
ATG17YLR423C KSH1Q8TGJ3 72 aa1.56□□□□□ -2.16
ATG17YLR423C RPS29BP41058 56 aaKnown RBP1.54□□□□□ -2.16
ATG17YLR423C BPH1P25356 2167 aa1.53□□□□□ -2.16
ATG17YLR423C YHL005CP38752 130 aa1.53□□□□□ -2.16
ATG17YLR423C PAU5P43575 122 aa1.53□□□□□ -2.16
ATG17YLR423C RSM19P53733 91 aaPredicted RBP1.52□□□□□ -2.17
ATG17YLR423C SNA2P56508 79 aa1.52□□□□□ -2.17
ATG17YLR423C ROX3P25046 220 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms