RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YLR419WQ06698 1435 aaKnown RBP0.37□□□□□ -2.35
SEC22YLR268W TY1B-PR2P0C2J0 1756 aa0.37□□□□□ -2.35
SEC22YLR268W UTP20P35194 2493 aaKnown RBP0.37□□□□□ -2.35
SEC22YLR268W IRA2P19158 3079 aa0.36□□□□□ -2.35
SEC22YLR268W PEP1P32319 1579 aa0.36□□□□□ -2.35
SEC22YLR268W IRC20Q06554 1556 aa0.36□□□□□ -2.35
SEC22YLR268W BCK1Q01389 1478 aa0.36□□□□□ -2.35
SEC22YLR268W IRA1P18963 3092 aa0.36□□□□□ -2.35
SEC22YLR268W FAS2P19097 1887 aaKnown RBP0.36□□□□□ -2.35
SEC22YLR268W YRF1-6P53819 1859 aa0.36□□□□□ -2.35
SEC22YLR268W YAL065CO13511 128 aa0.36□□□□□ -2.35
SEC22YLR268W YHR214C-DP0CX93 97 aa0.36□□□□□ -2.35
SEC22YLR268W ROX3P25046 220 aa0.36□□□□□ -2.35
SEC22YLR268W PAU2P32612 120 aa0.36□□□□□ -2.35
SEC22YLR268W PAU16P35994 123 aa0.36□□□□□ -2.35
SEC22YLR268W PAU24P38155 120 aa0.36□□□□□ -2.35
SEC22YLR268W YBR292CP38357 123 aa0.36□□□□□ -2.35
SEC22YLR268W SPI1P40092 148 aa0.36□□□□□ -2.35
SEC22YLR268W YNL198CP40166 100 aa0.36□□□□□ -2.35
SEC22YLR268W SMX2P40204 77 aaKnown RBP0.36□□□□□ -2.35
SEC22YLR268W AIM19P40502 157 aa0.36□□□□□ -2.35
SEC22YLR268W YIR020CP40575 100 aa0.36□□□□□ -2.35
SEC22YLR268W IMP2P46972 177 aa0.36□□□□□ -2.35
SEC22YLR268W PAU12P53343 120 aa0.36□□□□□ -2.35
SEC22YLR268W ICY1Q04329 127 aa0.36□□□□□ -2.35
SEC22YLR268W LSM6Q06406 86 aaKnown RBP0.36□□□□□ -2.35
SEC22YLR268W YPR145C-AQ2V2P0 78 aa0.36□□□□□ -2.35
SEC22YLR268W YGL041C-BQ3E750 60 aa0.36□□□□□ -2.35
SEC22YLR268W YOR376W-AQ3E805 51 aa0.36□□□□□ -2.35
SEC22YLR268W HAP1P0CE41 1502 aa0.36□□□□□ -2.35
SEC22YLR268W VTH1P40438 1549 aa0.36□□□□□ -2.35
SEC22YLR268W VTH2P40890 1549 aa0.36□□□□□ -2.35
SEC22YLR268W GDB1Q06625 1536 aa0.36□□□□□ -2.35
SEC22YLR268W TY3B-GQ99315 1547 aa0.36□□□□□ -2.35
SEC22YLR268W TY1B-DR1Q03855 1755 aa0.36□□□□□ -2.35
SEC22YLR268W TY1B-DR3Q99231 1755 aa0.36□□□□□ -2.35
SEC22YLR268W YRF1-2P40105 1681 aa0.36□□□□□ -2.35
SEC22YLR268W TY1B-NL2Q99337 1749 aaKnown RBP0.35□□□□□ -2.35
SEC22YLR268W UFD4P33202 1483 aa0.35□□□□□ -2.35
SEC22YLR268W TY1B-BRQ12193 1756 aa0.35□□□□□ -2.35
SEC22YLR268W CCW14O13547 238 aa0.35□□□□□ -2.35
SEC22YLR268W QCR9P22289 66 aa0.35□□□□□ -2.35
SEC22YLR268W PDX3P38075 228 aaKnown RBP0.35□□□□□ -2.35
SEC22YLR268W YSY6P38374 65 aa0.35□□□□□ -2.35
SEC22YLR268W COX23P38824 151 aa0.35□□□□□ -2.35
SEC22YLR268W PAU5P43575 122 aa0.35□□□□□ -2.35
SEC22YLR268W MRX7P53869 86 aa0.35□□□□□ -2.35
SEC22YLR268W SNA2P56508 79 aa0.35□□□□□ -2.35
SEC22YLR268W COX19Q3E731 98 aa0.35□□□□□ -2.35
SEC22YLR268W YCR095W-AQ3E787 52 aa0.35□□□□□ -2.35
SEC22YLR268W YDR182W-AQ3E796 67 aa0.35□□□□□ -2.35
SEC22YLR268W RRT15Q3E811 62 aa0.35□□□□□ -2.35
SEC22YLR268W TAO3P40468 2376 aa0.35□□□□□ -2.35
SEC22YLR268W CDC25P04821 1589 aa0.35□□□□□ -2.35
SEC22YLR268W RPO21P04050 1733 aaKnown RBP0.35□□□□□ -2.35
SEC22YLR268W ULS1Q08562 1619 aa0.35□□□□□ -2.35
SEC22YLR268W TY1B-DR5P0C2I2 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-DR6P0C2I3 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-LR2P0C2I5 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-LR3P0C2I6 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-PR1P0C2I9 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-PR3P0C2J1 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-JR1P47098 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-ML2Q03434 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-ER1Q03612 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-ML1Q04711 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-GR2Q12269 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-OLQ12273 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-GR3Q12316 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TY1B-PLQ12414 1755 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W TY1B-ORQ92393 1755 aa0.34□□□□□ -2.35
SEC22YLR268W TEL1P38110 2787 aa0.34□□□□□ -2.35
SEC22YLR268W RPA190P10964 1664 aaKnown RBP0.34□□□□□ -2.35
SEC22YLR268W DOP1Q03921 1698 aa0.34□□□□□ -2.35
SEC22YLR268W PAU6P0CE90 120 aa0.34□□□□□ -2.36
SEC22YLR268W PAU18P0CE91 120 aa0.34□□□□□ -2.36
SEC22YLR268W PAU8P0CE92 120 aa0.34□□□□□ -2.36
SEC22YLR268W PAU11P0CE93 120 aa0.34□□□□□ -2.36
SEC22YLR268W HMRA2P0CY13 119 aa0.34□□□□□ -2.36
SEC22YLR268W TIM12P32830 109 aa0.34□□□□□ -2.36
SEC22YLR268W MRPL38P35996 138 aaPredicted RBP0.34□□□□□ -2.36
SEC22YLR268W PAU13P38725 120 aa0.34□□□□□ -2.36
SEC22YLR268W MPC2P38857 129 aa0.34□□□□□ -2.36
SEC22YLR268W YHR173CP38864 112 aa0.34□□□□□ -2.36
SEC22YLR268W PAU7P39545 55 aa0.34□□□□□ -2.36
SEC22YLR268W VPS55P47111 140 aa0.34□□□□□ -2.36
SEC22YLR268W PAU4P53427 120 aa0.34□□□□□ -2.36
SEC22YLR268W BSC4P53841 131 aa0.34□□□□□ -2.36
SEC22YLR268W PAU10Q03050 120 aa0.34□□□□□ -2.36
SEC22YLR268W YDR246W-AQ3E763 66 aa0.34□□□□□ -2.36
SEC22YLR268W PAU9Q3E770 120 aa0.34□□□□□ -2.36
SEC22YLR268W YGR121W-AQ3E816 71 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-LR1P0C2J3 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-FP0CX63 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-GR2P0CX64 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-CP25384 1770 aa0.34□□□□□ -2.36
SEC22YLR268W UTP10P42945 1769 aaKnown RBP0.34□□□□□ -2.36
SEC22YLR268W TY1B-JR2P47100 1755 aaKnown RBP0.34□□□□□ -2.36
SEC22YLR268W TY2B-DR2Q03494 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY1B-ER2Q03619 1755 aa0.34□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms