RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C APC1P53886 1748 aa0.09□□□□□ -2.4
NUP120YKL057C YCR101CP25607 182 aa0.09□□□□□ -2.4
NUP120YKL057C YLR099W-AQ3E798 87 aa0.09□□□□□ -2.4
NUP120YKL057C ACC1Q00955 2233 aaKnown RBP0.08□□□□□ -2.4
NUP120YKL057C TY2B-LR1P0C2J3 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-FP0CX63 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-GR2P0CX64 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-CP25384 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-DR2Q03494 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-OR1Q12113 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-DR1Q12472 1770 aa0.08□□□□□ -2.4
NUP120YKL057C TY2B-OR2Q12501 1770 aa0.08□□□□□ -2.4
NUP120YKL057C QCR6P00127 147 aa0.08□□□□□ -2.4
NUP120YKL057C IMP2P46972 177 aa0.07□□□□□ -2.4
NUP120YKL057C YGR025WP53216 100 aa0.07□□□□□ -2.4
NUP120YKL057C ATX1P38636 73 aa0.07□□□□□ -2.4
NUP120YKL057C PDR12Q02785 1511 aa0.07□□□□□ -2.4
NUP120YKL057C COX23P38824 151 aa0.07□□□□□ -2.4
NUP120YKL057C AIM19P40502 157 aa0.07□□□□□ -2.4
NUP120YKL057C RPS29AP41057 56 aaKnown RBP0.07□□□□□ -2.4
NUP120YKL057C YDR034W-BQ6Q5X2 51 aa0.07□□□□□ -2.4
NUP120YKL057C TY2B-DR3Q07791 1770 aaKnown RBP0.06□□□□□ -2.4
NUP120YKL057C FLO1P32768 1537 aa0.06□□□□□ -2.4
NUP120YKL057C MRPL38P35996 138 aaPredicted RBP0.06□□□□□ -2.4
NUP120YKL057C SNN1P48232 102 aa0.06□□□□□ -2.4
NUP120YKL057C ENV10Q99382 181 aa0.06□□□□□ -2.4
NUP120YKL057C YER039C-AP0CD97 72 aa0.05□□□□□ -2.4
NUP120YKL057C RPS11AP0CX47 156 aaKnown RBP0.05□□□□□ -2.4
NUP120YKL057C RPS11BP0CX48 156 aaKnown RBP0.05□□□□□ -2.4
NUP120YKL057C TDA2P40045 126 aa0.05□□□□□ -2.4
NUP120YKL057C FMP27Q06179 2628 aa0.05□□□□□ -2.4
NUP120YKL057C RSM19P53733 91 aaPredicted RBP0.05□□□□□ -2.4
NUP120YKL057C TEL1P38110 2787 aa0.05□□□□□ -2.4
NUP120YKL057C MRP17P28778 131 aa0.04□□□□□ -2.4
NUP120YKL057C HYM1P32464 399 aa0.04□□□□□ -2.4
NUP120YKL057C YHR173CP38864 112 aa0.04□□□□□ -2.4
NUP120YKL057C PAM16P42949 149 aa0.04□□□□□ -2.4
NUP120YKL057C SHU1P38751 150 aa0.04□□□□□ -2.4
NUP120YKL057C ARL3Q02804 198 aa0.04□□□□□ -2.4
NUP120YKL057C PCC1Q3E833 88 aa0.04□□□□□ -2.4
NUP120YKL057C HKR1P41809 1802 aa0.04□□□□□ -2.4
NUP120YKL057C YMR090WQ04304 227 aaKnown RBP0.03□□□□□ -2.4
NUP120YKL057C SPC24Q04477 213 aa0.03□□□□□ -2.4
NUP120YKL057C HMRA2P0CY13 119 aa0.02□□□□□ -2.41
NUP120YKL057C GCV3P39726 170 aaPredicted RBP0.02□□□□□ -2.41
NUP120YKL057C SEC7P11075 2009 aaKnown RBP0.01□□□□□ -2.41
NUP120YKL057C YNL190WP53872 204 aa0.01□□□□□ -2.41
NUP120YKL057C YAR029WP39549 74 aa-0□□□□□ -2.41
NUP120YKL057C UTP20P35194 2493 aaKnown RBP-0.01□□□□□ -2.41
NUP120YKL057C LSM6Q06406 86 aaKnown RBP-0.01□□□□□ -2.41
NUP120YKL057C YPL038W-AQ3E7B4 63 aa-0.01□□□□□ -2.41
NUP120YKL057C YOR376W-AQ3E805 51 aa-0.01□□□□□ -2.41
NUP120YKL057C YKL068W-AQ3E826 78 aa-0.01□□□□□ -2.41
NUP120YKL057C KRE5P22023 1365 aa-0.02□□□□□ -2.41
NUP120YKL057C AUA1P32450 94 aa-0.02□□□□□ -2.41
NUP120YKL057C YDR029WQ12111 104 aa-0.02□□□□□ -2.41
NUP120YKL057C PAU12P53343 120 aa-0.03□□□□□ -2.41
NUP120YKL057C PMD1P32634 1753 aa-0.03□□□□□ -2.41
NUP120YKL057C YBR016WP38216 128 aa-0.03□□□□□ -2.41
NUP120YKL057C RPS12P48589 143 aaKnown RBP-0.03□□□□□ -2.41
NUP120YKL057C ICY1Q04329 127 aa-0.04□□□□□ -2.42
NUP120YKL057C NHP2P32495 156 aaPredicted RBP-0.04□□□□□ -2.42
NUP120YKL057C EMC5P40540 141 aa-0.04□□□□□ -2.42
NUP120YKL057C YLR285C-AQ3E771 56 aa-0.04□□□□□ -2.42
NUP120YKL057C SRB6P32570 121 aa-0.04□□□□□ -2.42
NUP120YKL057C YHR130CP38834 111 aa-0.04□□□□□ -2.42
NUP120YKL057C CYB5P40312 120 aa-0.04□□□□□ -2.42
NUP120YKL057C MRX7P53869 86 aa-0.05□□□□□ -2.42
NUP120YKL057C IQG1Q12280 1495 aa-0.05□□□□□ -2.42
NUP120YKL057C RGI1P40043 161 aaPredicted RBP-0.05□□□□□ -2.42
NUP120YKL057C MLP2P40457 1679 aa-0.06□□□□□ -2.42
NUP120YKL057C PAU19P0CE85 124 aa-0.06□□□□□ -2.42
NUP120YKL057C PAU3P25610 124 aa-0.06□□□□□ -2.42
NUP120YKL057C YMR103CQ04436 120 aa-0.06□□□□□ -2.42
NUP120YKL057C SKI3P17883 1432 aaKnown RBP-0.06□□□□□ -2.42
NUP120YKL057C UTP10P42945 1769 aaKnown RBP-0.06□□□□□ -2.42
NUP120YKL057C SPT6P23615 1451 aaKnown RBP-0.06□□□□□ -2.42
NUP120YKL057C EDC1P53080 175 aaPredicted RBP-0.07□□□□□ -2.42
NUP120YKL057C YLR042CQ07990 161 aa-0.08□□□□□ -2.42
NUP120YKL057C TAO3P40468 2376 aa-0.08□□□□□ -2.42
NUP120YKL057C ECM29P38737 1868 aa-0.09□□□□□ -2.42
NUP120YKL057C YOR304C-AO14468 76 aa-0.09□□□□□ -2.42
NUP120YKL057C FKS3Q04952 1785 aa-0.09□□□□□ -2.42
NUP120YKL057C PAU2P32612 120 aa-0.09□□□□□ -2.42
NUP120YKL057C PAU16P35994 123 aa-0.09□□□□□ -2.42
NUP120YKL057C PAU15P40585 124 aa-0.09□□□□□ -2.42
NUP120YKL057C MIC10Q96VH5 97 aa-0.09□□□□□ -2.42
NUP120YKL057C PAU24P38155 120 aa-0.1□□□□□ -2.43
NUP120YKL057C RPL38P49167 78 aaKnown RBP-0.1□□□□□ -2.43
NUP120YKL057C COX7P10174 60 aa-0.11□□□□□ -2.43
NUP120YKL057C KSH1Q8TGJ3 72 aa-0.11□□□□□ -2.43
NUP120YKL057C IRA1P18963 3092 aa-0.11□□□□□ -2.43
NUP120YKL057C YNL198CP40166 100 aa-0.11□□□□□ -2.43
NUP120YKL057C WIP1Q2V2P8 89 aa-0.11□□□□□ -2.43
NUP120YKL057C YCR095W-AQ3E787 52 aa-0.12□□□□□ -2.43
NUP120YKL057C TOR2P32600 2474 aaKnown RBP-0.12□□□□□ -2.43
NUP120YKL057C LAA1P39526 2014 aa-0.13□□□□□ -2.43
NUP120YKL057C YOL164W-AQ3E7A5 60 aa-0.13□□□□□ -2.43
NUP120YKL057C URA2P07259 2214 aaKnown RBP-0.14□□□□□ -2.43
NUP120YKL057C RSM18P40033 138 aa-0.14□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms