RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W RTC6O14464 93 aa2.95□□□□□ -1.94
CDC6YJL194W SVP26P38869 228 aa2.95□□□□□ -1.94
CDC6YJL194W YER084WP40057 128 aa2.95□□□□□ -1.94
CDC6YJL194W HUG1Q6Q5K6 68 aa2.95□□□□□ -1.94
CDC6YJL194W ATX1P38636 73 aa2.94□□□□□ -1.94
CDC6YJL194W YHL005CP38752 130 aa2.94□□□□□ -1.94
CDC6YJL194W YFL051CP43552 160 aa2.94□□□□□ -1.94
CDC6YJL194W FIT2Q08906 153 aa2.94□□□□□ -1.94
CDC6YJL194W YIL102C-AQ2V2P5 75 aa2.94□□□□□ -1.94
CDC6YJL194W RPA12P32529 125 aaKnown RBP2.93□□□□□ -1.94
CDC6YJL194W YDR042CQ03205 200 aa2.93□□□□□ -1.94
CDC6YJL194W RDS3Q06835 107 aaPredicted RBP2.93□□□□□ -1.94
CDC6YJL194W VPS68Q12016 184 aa2.93□□□□□ -1.94
CDC6YJL194W RPL36BO14455 100 aaKnown RBP2.93□□□□□ -1.94
CDC6YJL194W RPL36AP05745 100 aaPredicted RBP2.93□□□□□ -1.94
CDC6YJL194W RPS22AP0C0W1 130 aaKnown RBP2.93□□□□□ -1.94
CDC6YJL194W POP3P53833 195 aaPredicted RBP2.93□□□□□ -1.94
CDC6YJL194W YIL014C-AQ02598 104 aa2.93□□□□□ -1.94
CDC6YJL194W YOL118CQ08259 102 aa2.93□□□□□ -1.94
CDC6YJL194W YOR192C-CQ3E736 78 aa2.93□□□□□ -1.94
CDC6YJL194W KRE1P17260 313 aa2.92□□□□□ -1.94
CDC6YJL194W HSP150P32478 413 aa2.92□□□□□ -1.94
CDC6YJL194W YIR020CP40575 100 aa2.92□□□□□ -1.94
CDC6YJL194W CWP2P43497 92 aa2.92□□□□□ -1.94
CDC6YJL194W YJL144WP47009 104 aa2.92□□□□□ -1.94
CDC6YJL194W RPS22BQ3E7Y3 130 aaKnown RBP2.92□□□□□ -1.94
CDC6YJL194W YCR085WP25650 117 aa2.91□□□□□ -1.94
CDC6YJL194W RPB7P34087 171 aa2.91□□□□□ -1.94
CDC6YJL194W YHR022CP38763 256 aa2.91□□□□□ -1.94
CDC6YJL194W YHR007C-AQ07074 71 aa2.91□□□□□ -1.94
CDC6YJL194W EMC6Q12431 108 aa2.91□□□□□ -1.94
CDC6YJL194W CMC4Q3E7A9 73 aa2.91□□□□□ -1.94
CDC6YJL194W YHR213WP0CI67 198 aa2.9□□□□□ -1.95
CDC6YJL194W YMR175W-AQ3E766 64 aa2.9□□□□□ -1.95
CDC6YJL194W RRT15Q3E811 62 aa2.9□□□□□ -1.95
CDC6YJL194W CDC39P25655 2108 aaKnown RBP2.89□□□□□ -1.95
CDC6YJL194W QCR9P22289 66 aa2.89□□□□□ -1.95
CDC6YJL194W LST8P41318 303 aa2.89□□□□□ -1.95
CDC6YJL194W YJR146WP47174 117 aa2.89□□□□□ -1.95
CDC6YJL194W RGM1Q00453 211 aa2.89□□□□□ -1.95
CDC6YJL194W YPR108W-AQ3E7B3 70 aa2.89□□□□□ -1.95
CDC6YJL194W SRX1P36077 127 aa2.88□□□□□ -1.95
CDC6YJL194W RSM18P40033 138 aa2.88□□□□□ -1.95
CDC6YJL194W TOM7P53507 60 aa2.88□□□□□ -1.95
CDC6YJL194W YOR343CQ12484 108 aa2.88□□□□□ -1.95
CDC6YJL194W ENV10Q99382 181 aa2.88□□□□□ -1.95
CDC6YJL194W NHP2P32495 156 aaPredicted RBP2.88□□□□□ -1.95
CDC6YJL194W MIC27P50945 234 aa2.88□□□□□ -1.95
CDC6YJL194W MIX17Q03667 156 aa2.88□□□□□ -1.95
CDC6YJL194W QCR8P08525 94 aa2.87□□□□□ -1.95
CDC6YJL194W YLR194CQ05777 254 aa2.87□□□□□ -1.95
CDC6YJL194W HPA2Q06592 156 aa2.87□□□□□ -1.95
CDC6YJL194W YBR027CP38220 110 aa2.86□□□□□ -1.95
CDC6YJL194W TOM6P33448 61 aa2.85□□□□□ -1.95
CDC6YJL194W COX23P38824 151 aa2.85□□□□□ -1.95
CDC6YJL194W NCE101Q02820 53 aa2.85□□□□□ -1.95
CDC6YJL194W PFY1P07274 126 aa2.84□□□□□ -1.95
CDC6YJL194W DSE2P38844 325 aa2.84□□□□□ -1.95
CDC6YJL194W POR2P40478 281 aa2.84□□□□□ -1.95
CDC6YJL194W ICY1Q04329 127 aa2.84□□□□□ -1.95
CDC6YJL194W CYR1P08678 2026 aaKnown RBP2.84□□□□□ -1.96
CDC6YJL194W MRPL31P14063 131 aaPredicted RBP2.83□□□□□ -1.96
CDC6YJL194W BLM10P43583 2143 aa2.83□□□□□ -1.96
CDC6YJL194W YDL022C-AP0C5L6 82 aa2.83□□□□□ -1.96
CDC6YJL194W FPR1P20081 114 aaKnown RBP2.83□□□□□ -1.96
CDC6YJL194W YHR173CP38864 112 aa2.83□□□□□ -1.96
CDC6YJL194W VPS55P47111 140 aa2.83□□□□□ -1.96
CDC6YJL194W YDR119W-AQ2V2P9 66 aa2.83□□□□□ -1.96
CDC6YJL194W FLO9P39712 1322 aa2.82□□□□□ -1.96
CDC6YJL194W YHL037CP38733 133 aa2.82□□□□□ -1.96
CDC6YJL194W YMR141CP40211 102 aa2.82□□□□□ -1.96
CDC6YJL194W IMP2P46972 177 aa2.82□□□□□ -1.96
CDC6YJL194W YDR524C-BQ3E6R4 66 aa2.82□□□□□ -1.96
CDC6YJL194W ROX3P25046 220 aa2.81□□□□□ -1.96
CDC6YJL194W VAM10Q08474 114 aa2.81□□□□□ -1.96
CDC6YJL194W YKL023C-AQ2V2P3 75 aa2.81□□□□□ -1.96
CDC6YJL194W YCL048W-AQ2V2Q2 79 aa2.81□□□□□ -1.96
CDC6YJL194W ICS3P47034 131 aa2.8□□□□□ -1.96
CDC6YJL194W SED1Q01589 338 aa2.8□□□□□ -1.96
CDC6YJL194W YFL041W-AQ3E817 63 aa2.8□□□□□ -1.96
CDC6YJL194W FAS1P07149 2051 aaKnown RBP2.79□□□□□ -1.96
CDC6YJL194W SEC16P48415 2195 aaKnown RBP2.79□□□□□ -1.96
CDC6YJL194W YSF3P0C074 85 aaPredicted RBP2.79□□□□□ -1.96
CDC6YJL194W PAU7P39545 55 aa2.79□□□□□ -1.96
CDC6YJL194W LSM6Q06406 86 aaKnown RBP2.79□□□□□ -1.96
CDC6YJL194W YGL014C-AP0C5N1 53 aa2.78□□□□□ -1.96
CDC6YJL194W RPS27AP35997 82 aaKnown RBP2.78□□□□□ -1.96
CDC6YJL194W RPS27BP38711 82 aa2.78□□□□□ -1.96
CDC6YJL194W BEM2P39960 2167 aaKnown RBP2.78□□□□□ -1.96
CDC6YJL194W ACC1Q00955 2233 aaKnown RBP2.78□□□□□ -1.96
CDC6YJL194W BRR2P32639 2163 aaKnown RBP2.78□□□□□ -1.96
CDC6YJL194W HMRA2P0CY13 119 aa2.78□□□□□ -1.97
CDC6YJL194W PRM7Q12459 698 aa2.78□□□□□ -1.97
CDC6YJL194W YGL258W-AQ3E740 77 aa2.78□□□□□ -1.97
CDC6YJL194W RPL33AP05744 107 aaKnown RBP2.77□□□□□ -1.97
CDC6YJL194W GIS2P53849 153 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
CDC6YJL194W YNL190WP53872 204 aa2.76□□□□□ -1.97
CDC6YJL194W FPR2P32472 135 aa2.75□□□□□ -1.97
CDC6YJL194W YMR122CQ03879 124 aa2.74□□□□□ -1.97
CDC6YJL194W YDR381C-AQ3E6R5 114 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms