RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W LTE1P07866 1435 aa2.02□□□□□ -2.09
UBC6YER100W YLR157W-EP0CF00 54 aa2.02□□□□□ -2.09
UBC6YER100W RPS11AP0CX47 156 aaKnown RBP2.01□□□□□ -2.09
UBC6YER100W RPS11BP0CX48 156 aaKnown RBP2.01□□□□□ -2.09
UBC6YER100W AUA1P32450 94 aa2.01□□□□□ -2.09
UBC6YER100W GDB1Q06625 1536 aa2.01□□□□□ -2.09
UBC6YER100W KOG1P38873 1557 aa2□□□□□ -2.09
UBC6YER100W RKR1Q04781 1562 aa2□□□□□ -2.09
UBC6YER100W SCC2Q04002 1493 aa1.99□□□□□ -2.09
UBC6YER100W ATG2P53855 1592 aa1.98□□□□□ -2.09
UBC6YER100W SNQ2P32568 1501 aaKnown RBP1.98□□□□□ -2.09
UBC6YER100W BSC4P53841 131 aa1.98□□□□□ -2.09
UBC6YER100W MYO1P08964 1928 aa1.97□□□□□ -2.09
UBC6YER100W RPO31P04051 1460 aa1.97□□□□□ -2.09
UBC6YER100W MLP2P40457 1679 aa1.96□□□□□ -2.1
UBC6YER100W NTE1Q04958 1679 aa1.96□□□□□ -2.1
UBC6YER100W CWP2P43497 92 aa1.96□□□□□ -2.1
UBC6YER100W PEP1P32319 1579 aa1.96□□□□□ -2.1
UBC6YER100W YCF1P39109 1515 aaKnown RBP1.96□□□□□ -2.1
UBC6YER100W PDR15Q04182 1529 aaKnown RBP1.96□□□□□ -2.1
UBC6YER100W BRR2P32639 2163 aaKnown RBP1.95□□□□□ -2.1
UBC6YER100W NUP170P38181 1502 aa1.95□□□□□ -2.1
UBC6YER100W YDR010CQ12426 110 aa1.94□□□□□ -2.1
UBC6YER100W VPS15P22219 1454 aa1.93□□□□□ -2.1
UBC6YER100W YRF1-1P0CX20 1796 aa1.93□□□□□ -2.1
UBC6YER100W YRF1-5P0CX21 1796 aa1.93□□□□□ -2.1
UBC6YER100W YRF1-8P0CX22 1796 aa1.93□□□□□ -2.1
UBC6YER100W VTH1P40438 1549 aa1.92□□□□□ -2.1
UBC6YER100W VTH2P40890 1549 aa1.92□□□□□ -2.1
UBC6YER100W TY4B-HP0C2J7 1802 aa1.92□□□□□ -2.1
UBC6YER100W YMR175W-AQ3E766 64 aa1.92□□□□□ -2.1
UBC6YER100W NUP159P40477 1460 aa1.92□□□□□ -2.1
UBC6YER100W DNF1P32660 1571 aa1.92□□□□□ -2.1
UBC6YER100W ULS1Q08562 1619 aa1.91□□□□□ -2.1
UBC6YER100W ESC1Q03661 1658 aaKnown RBP1.91□□□□□ -2.1
UBC6YER100W URA2P07259 2214 aaKnown RBP1.91□□□□□ -2.1
UBC6YER100W YSP2Q06681 1438 aa1.91□□□□□ -2.1
UBC6YER100W TY2B-LR1P0C2J3 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-FP0CX63 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-GR2P0CX64 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-CP25384 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-DR2Q03494 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY1B-DR1Q03855 1755 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-DR3Q07791 1770 aaKnown RBP1.9□□□□□ -2.1
UBC6YER100W TY2B-OR1Q12113 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-DR1Q12472 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY2B-OR2Q12501 1770 aa1.9□□□□□ -2.1
UBC6YER100W TY1B-DR3Q99231 1755 aa1.9□□□□□ -2.1
UBC6YER100W MMS1Q06211 1407 aa1.9□□□□□ -2.11
UBC6YER100W CDC25P04821 1589 aa1.89□□□□□ -2.11
UBC6YER100W FPR2P32472 135 aa1.89□□□□□ -2.11
UBC6YER100W RPA12P32529 125 aaKnown RBP1.89□□□□□ -2.11
UBC6YER100W YNL042W-BQ3E7Z2 85 aa1.89□□□□□ -2.11
UBC6YER100W TY3B-GQ99315 1547 aa1.89□□□□□ -2.11
UBC6YER100W TY2B-BQ12491 1770 aa1.89□□□□□ -2.11
UBC6YER100W GCN2P15442 1659 aa1.89□□□□□ -2.11
UBC6YER100W YBT1P32386 1661 aa1.88□□□□□ -2.11
UBC6YER100W TY1B-DR5P0C2I2 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-DR6P0C2I3 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-LR2P0C2I5 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-LR3P0C2I6 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W TY1B-PR1P0C2I9 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W TY1B-PR2P0C2J0 1756 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-PR3P0C2J1 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W TY1B-JR1P47098 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-ML2Q03434 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W TY1B-ER1Q03612 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-ML1Q04711 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W TY1B-GR2Q12269 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-OLQ12273 1755 aa1.87□□□□□ -2.11
UBC6YER100W TY1B-PLQ12414 1755 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W ARO1P08566 1588 aaKnown RBP1.87□□□□□ -2.11
UBC6YER100W YCR085WP25650 117 aa1.87□□□□□ -2.11
UBC6YER100W IRC20Q06554 1556 aa1.87□□□□□ -2.11
UBC6YER100W PAU23Q07987 124 aa1.87□□□□□ -2.11
UBC6YER100W PAU17Q12370 124 aa1.87□□□□□ -2.11
UBC6YER100W YOR343CQ12484 108 aa1.87□□□□□ -2.11
UBC6YER100W YOL164W-AQ3E7A5 60 aa1.87□□□□□ -2.11
UBC6YER100W Q0032Q9ZZX7 96 aa1.87□□□□□ -2.11
UBC6YER100W PDR5P33302 1511 aaKnown RBP1.86□□□□□ -2.11
UBC6YER100W TY1B-BRQ12193 1756 aa1.86□□□□□ -2.11
UBC6YER100W TY1B-GR3Q12316 1755 aa1.86□□□□□ -2.11
UBC6YER100W TY1B-ORQ92393 1755 aa1.86□□□□□ -2.11
UBC6YER100W YHR214C-DP0CX93 97 aa1.86□□□□□ -2.11
UBC6YER100W IQG1Q12280 1495 aa1.86□□□□□ -2.11
UBC6YER100W RPO21P04050 1733 aaKnown RBP1.86□□□□□ -2.11
UBC6YER100W YBR201C-AQ2V2Q3 67 aa1.85□□□□□ -2.11
UBC6YER100W TY1B-JR2P47100 1755 aaKnown RBP1.85□□□□□ -2.11
UBC6YER100W TY1B-ER2Q03619 1755 aa1.85□□□□□ -2.11
UBC6YER100W TY1B-MR1Q04214 1755 aa1.85□□□□□ -2.11
UBC6YER100W TY1B-MR2Q04670 1755 aaKnown RBP1.85□□□□□ -2.11
UBC6YER100W TY1B-LR1Q12088 1755 aaKnown RBP1.85□□□□□ -2.11
UBC6YER100W TY1B-NL1Q12112 1755 aa1.85□□□□□ -2.11
UBC6YER100W TY1B-GR1Q12141 1755 aa1.85□□□□□ -2.11
UBC6YER100W TY1B-BLQ12490 1755 aa1.85□□□□□ -2.11
UBC6YER100W BUD3P25558 1636 aa1.84□□□□□ -2.11
UBC6YER100W PDX3P38075 228 aaKnown RBP1.84□□□□□ -2.11
UBC6YER100W YKL068W-AQ3E826 78 aa1.84□□□□□ -2.11
UBC6YER100W PDR12Q02785 1511 aa1.84□□□□□ -2.11
UBC6YER100W YOR093CQ12275 1648 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms