RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W HMRA1P0CY11 126 aa-0.22□□□□□ -2.44
LCD1YDR499W YHL005CP38752 130 aa-0.22□□□□□ -2.44
LCD1YDR499W EMC5P40540 141 aa-0.22□□□□□ -2.44
LCD1YDR499W PDR11P40550 1411 aa-0.22□□□□□ -2.44
LCD1YDR499W GEA1P47102 1408 aaPredicted RBP-0.22□□□□□ -2.44
LCD1YDR499W BPH1P25356 2167 aa-0.22□□□□□ -2.44
LCD1YDR499W YBR201C-AQ2V2Q3 67 aa-0.22□□□□□ -2.45
LCD1YDR499W YCR108CQ3E819 63 aa-0.23□□□□□ -2.45
LCD1YDR499W RRT15Q3E811 62 aa-0.23□□□□□ -2.45
LCD1YDR499W DNF3Q12674 1656 aa-0.24□□□□□ -2.45
LCD1YDR499W RGI1P40043 161 aaPredicted RBP-0.24□□□□□ -2.45
LCD1YDR499W YDR381C-AQ3E6R5 114 aa-0.24□□□□□ -2.45
LCD1YDR499W HKR1P41809 1802 aa-0.24□□□□□ -2.45
LCD1YDR499W TY1B-PR2P0C2J0 1756 aa-0.25□□□□□ -2.45
LCD1YDR499W TOM6P33448 61 aa-0.25□□□□□ -2.45
LCD1YDR499W SNU13P39990 126 aaKnown RBP-0.26□□□□□ -2.45
LCD1YDR499W BSC4P53841 131 aa-0.26□□□□□ -2.45
LCD1YDR499W REV3P14284 1504 aa-0.26□□□□□ -2.45
LCD1YDR499W GEA2P39993 1459 aaKnown RBP-0.27□□□□□ -2.45
LCD1YDR499W MDS3P53094 1487 aa-0.27□□□□□ -2.45
LCD1YDR499W YMR122W-AQ3E842 84 aa-0.27□□□□□ -2.45
LCD1YDR499W YHR214C-DP0CX93 97 aa-0.28□□□□□ -2.45
LCD1YDR499W YAL065CO13511 128 aa-0.28□□□□□ -2.45
LCD1YDR499W SDH6Q3E785 79 aa-0.28□□□□□ -2.45
LCD1YDR499W MSL1P40567 111 aaPredicted RBP-0.29□□□□□ -2.46
LCD1YDR499W YGR025WP53216 100 aa-0.29□□□□□ -2.46
LCD1YDR499W ATP18P81450 59 aa-0.29□□□□□ -2.46
LCD1YDR499W RPA190P10964 1664 aaKnown RBP-0.29□□□□□ -2.46
LCD1YDR499W TY1B-DR6P0C2I3 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-LR2P0C2I5 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-JR2P47100 1755 aaKnown RBP-0.29□□□□□ -2.46
LCD1YDR499W TY1B-MR1Q04214 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-MR2Q04670 1755 aaKnown RBP-0.29□□□□□ -2.46
LCD1YDR499W TY1B-NL1Q12112 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-GR1Q12141 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-GR3Q12316 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W TY1B-PLQ12414 1755 aaKnown RBP-0.29□□□□□ -2.46
LCD1YDR499W TY1B-ORQ92393 1755 aa-0.29□□□□□ -2.46
LCD1YDR499W STT4P37297 1900 aa-0.3□□□□□ -2.46
LCD1YDR499W YDR246W-AQ3E763 66 aa-0.3□□□□□ -2.46
LCD1YDR499W PMD1P32634 1753 aa-0.3□□□□□ -2.46
LCD1YDR499W YDR029WQ12111 104 aa-0.3□□□□□ -2.46
LCD1YDR499W POL1P13382 1468 aa-0.31□□□□□ -2.46
LCD1YDR499W ECM12O13529 151 aa-0.32□□□□□ -2.46
LCD1YDR499W NHP2P32495 156 aaPredicted RBP-0.32□□□□□ -2.46
LCD1YDR499W SUS1Q6WNK7 96 aa-0.32□□□□□ -2.46
LCD1YDR499W ECM29P38737 1868 aa-0.32□□□□□ -2.46
LCD1YDR499W FPR2P32472 135 aa-0.32□□□□□ -2.46
LCD1YDR499W YDR042CQ03205 200 aa-0.32□□□□□ -2.46
LCD1YDR499W MHF2Q3E829 80 aa-0.32□□□□□ -2.46
LCD1YDR499W YCR085WP25650 117 aa-0.33□□□□□ -2.46
LCD1YDR499W FYV7Q12247 151 aa-0.33□□□□□ -2.46
LCD1YDR499W EDC1P53080 175 aaPredicted RBP-0.33□□□□□ -2.46
LCD1YDR499W PAU23Q07987 124 aa-0.34□□□□□ -2.46
LCD1YDR499W PAU17Q12370 124 aa-0.34□□□□□ -2.46
LCD1YDR499W YPR108W-AQ3E7B3 70 aa-0.34□□□□□ -2.46
LCD1YDR499W YBL044WP38194 122 aa-0.34□□□□□ -2.46
LCD1YDR499W MOT1P32333 1867 aa-0.35□□□□□ -2.46
LCD1YDR499W GDB1Q06625 1536 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-DR5P0C2I2 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.35□□□□□ -2.47
LCD1YDR499W TY1B-JR1P47098 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-ML2Q03434 1755 aaKnown RBP-0.35□□□□□ -2.47
LCD1YDR499W TY1B-ER1Q03612 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-ER2Q03619 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-DR1Q03855 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-ML1Q04711 1755 aaKnown RBP-0.35□□□□□ -2.47
LCD1YDR499W TY1B-LR1Q12088 1755 aaKnown RBP-0.35□□□□□ -2.47
LCD1YDR499W TY1B-GR2Q12269 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-OLQ12273 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W TY1B-DR3Q99231 1755 aa-0.35□□□□□ -2.47
LCD1YDR499W SCP1Q08873 200 aa-0.36□□□□□ -2.47
LCD1YDR499W YBR032WP38223 100 aa-0.36□□□□□ -2.47
LCD1YDR499W TOR1P35169 2470 aa-0.37□□□□□ -2.47
LCD1YDR499W MMS1Q06211 1407 aa-0.37□□□□□ -2.47
LCD1YDR499W SWR1Q05471 1514 aa-0.37□□□□□ -2.47
LCD1YDR499W ZEO1Q08245 113 aa-0.38□□□□□ -2.47
LCD1YDR499W YOL097W-AQ3E7Y9 61 aa-0.38□□□□□ -2.47
LCD1YDR499W YKL068W-AQ3E826 78 aa-0.38□□□□□ -2.47
LCD1YDR499W NOP10Q6Q547 58 aaPredicted RBP-0.38□□□□□ -2.47
LCD1YDR499W RPS29AP41057 56 aaKnown RBP-0.38□□□□□ -2.47
LCD1YDR499W XRN1P22147 1528 aaKnown RBP-0.39□□□□□ -2.47
LCD1YDR499W PDR10P51533 1564 aa-0.39□□□□□ -2.47
LCD1YDR499W UTP10P42945 1769 aaKnown RBP-0.4□□□□□ -2.47
LCD1YDR499W YIL156W-BQ2V2P4 73 aa-0.4□□□□□ -2.47
LCD1YDR499W YCL001W-BQ96VH2 84 aa-0.4□□□□□ -2.47
LCD1YDR499W YMR001C-AQ8TGS9 76 aa-0.42□□□□□ -2.48
LCD1YDR499W YMR082CQ04276 118 aa-0.42□□□□□ -2.48
LCD1YDR499W YPL225WQ08971 146 aaKnown RBP-0.43□□□□□ -2.48
LCD1YDR499W YOR343CQ12484 108 aa-0.43□□□□□ -2.48
LCD1YDR499W YCR075W-AQ3E830 75 aa-0.43□□□□□ -2.48
LCD1YDR499W YMR175W-AQ3E766 64 aa-0.44□□□□□ -2.48
LCD1YDR499W YOR105WQ08504 108 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-LR1P0C2J3 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-FP0CX63 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-GR2P0CX64 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-CP25384 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-DR2Q03494 1770 aa-0.44□□□□□ -2.48
LCD1YDR499W TY2B-DR3Q07791 1770 aaKnown RBP-0.44□□□□□ -2.48
LCD1YDR499W TY2B-OR1Q12113 1770 aa-0.44□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms