RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C SWM2P40342 146 aa2.82□□□□□ -1.96
MSS116YDR194C YOR314WQ12506 109 aa2.82□□□□□ -1.96
MSS116YDR194C TY1B-DR1Q03855 1755 aa2.82□□□□□ -1.96
MSS116YDR194C TY1B-DR3Q99231 1755 aa2.82□□□□□ -1.96
MSS116YDR194C NUM1Q00402 2748 aa2.82□□□□□ -1.96
MSS116YDR194C YNR034W-AQ3E841 98 aa2.81□□□□□ -1.96
MSS116YDR194C RPO31P04051 1460 aa2.81□□□□□ -1.96
MSS116YDR194C RPS11AP0CX47 156 aaKnown RBP2.81□□□□□ -1.96
MSS116YDR194C RPS11BP0CX48 156 aaKnown RBP2.81□□□□□ -1.96
MSS116YDR194C PAU20Q08322 120 aa2.8□□□□□ -1.96
MSS116YDR194C DNF1P32660 1571 aa2.8□□□□□ -1.96
MSS116YDR194C YBR292CP38357 123 aa2.8□□□□□ -1.96
MSS116YDR194C MPC2P38857 129 aa2.8□□□□□ -1.96
MSS116YDR194C YPR145C-AQ2V2P0 78 aa2.8□□□□□ -1.96
MSS116YDR194C DOP1Q03921 1698 aa2.79□□□□□ -1.96
MSS116YDR194C YIL086CP40503 102 aa2.78□□□□□ -1.96
MSS116YDR194C YER188C-AP0C0V2 99 aa2.78□□□□□ -1.97
MSS116YDR194C YRF1-1P0CX20 1796 aa2.77□□□□□ -1.97
MSS116YDR194C YRF1-5P0CX21 1796 aa2.77□□□□□ -1.97
MSS116YDR194C YRF1-8P0CX22 1796 aa2.77□□□□□ -1.97
MSS116YDR194C YJR128WP47162 119 aa2.76□□□□□ -1.97
MSS116YDR194C PAU23Q07987 124 aa2.76□□□□□ -1.97
MSS116YDR194C YOR105WQ08504 108 aa2.76□□□□□ -1.97
MSS116YDR194C PAU17Q12370 124 aa2.76□□□□□ -1.97
MSS116YDR194C BRR2P32639 2163 aaKnown RBP2.76□□□□□ -1.97
MSS116YDR194C IRC20Q06554 1556 aa2.76□□□□□ -1.97
MSS116YDR194C ATX1P38636 73 aa2.76□□□□□ -1.97
MSS116YDR194C SMC4Q12267 1418 aa2.76□□□□□ -1.97
MSS116YDR194C YAL065CO13511 128 aa2.75□□□□□ -1.97
MSS116YDR194C TCB3Q03640 1545 aaKnown RBP2.75□□□□□ -1.97
MSS116YDR194C YHR213W-BQ8TGK1 99 aa2.74□□□□□ -1.97
MSS116YDR194C SEC16P48415 2195 aaKnown RBP2.74□□□□□ -1.97
MSS116YDR194C SHU1P38751 150 aa2.74□□□□□ -1.97
MSS116YDR194C FAS2P19097 1887 aaKnown RBP2.73□□□□□ -1.97
MSS116YDR194C SCC2Q04002 1493 aa2.73□□□□□ -1.97
MSS116YDR194C YDR010CQ12426 110 aa2.72□□□□□ -1.97
MSS116YDR194C YFL041W-AQ3E817 63 aa2.72□□□□□ -1.97
MSS116YDR194C PDX3P38075 228 aaKnown RBP2.72□□□□□ -1.97
MSS116YDR194C YMR141CP40211 102 aa2.71□□□□□ -1.98
MSS116YDR194C FPR2P32472 135 aa2.7□□□□□ -1.98
MSS116YDR194C UFD4P33202 1483 aa2.7□□□□□ -1.98
MSS116YDR194C QCR9P22289 66 aa2.68□□□□□ -1.98
MSS116YDR194C YGR121W-AQ3E816 71 aa2.68□□□□□ -1.98
MSS116YDR194C ECM29P38737 1868 aa2.68□□□□□ -1.98
MSS116YDR194C NOP10Q6Q547 58 aaPredicted RBP2.67□□□□□ -1.98
MSS116YDR194C YFR010W-AP0C5N0 62 aa2.66□□□□□ -1.98
MSS116YDR194C YNL042W-BQ3E7Z2 85 aa2.65□□□□□ -1.98
MSS116YDR194C YPR117WQ06116 2489 aa2.65□□□□□ -1.99
MSS116YDR194C RPL37AP49166 88 aaKnown RBP2.63□□□□□ -1.99
MSS116YDR194C YOL131WQ08270 108 aa2.63□□□□□ -1.99
MSS116YDR194C YIL156W-BQ2V2P4 73 aa2.63□□□□□ -1.99
MSS116YDR194C YOR034C-AQ3E735 80 aa2.63□□□□□ -1.99
MSS116YDR194C VPS15P22219 1454 aa2.62□□□□□ -1.99
MSS116YDR194C SSS1P35179 80 aa2.61□□□□□ -1.99
MSS116YDR194C MYO4P32492 1471 aa2.61□□□□□ -1.99
MSS116YDR194C YOR093CQ12275 1648 aa2.6□□□□□ -1.99
MSS116YDR194C TIM12P32830 109 aa2.6□□□□□ -1.99
MSS116YDR194C YMR122W-AQ3E842 84 aa2.6□□□□□ -1.99
MSS116YDR194C YGR035W-AQ45U48 73 aa2.6□□□□□ -1.99
MSS116YDR194C IQG1Q12280 1495 aa2.59□□□□□ -1.99
MSS116YDR194C MMS1Q06211 1407 aa2.59□□□□□ -1.99
MSS116YDR194C POL2P21951 2222 aaKnown RBP2.59□□□□□ -1.99
MSS116YDR194C TY4B-HP0C2J7 1802 aa2.59□□□□□ -2
MSS116YDR194C YHR173CP38864 112 aa2.59□□□□□ -2
MSS116YDR194C SPI1P40092 148 aa2.59□□□□□ -2
MSS116YDR194C TY1B-GR3Q12316 1755 aa2.59□□□□□ -2
MSS116YDR194C TY1B-ORQ92393 1755 aa2.59□□□□□ -2
MSS116YDR194C RRP5Q05022 1729 aaKnown RBP2.57□□□□□ -2
MSS116YDR194C URA2P07259 2214 aaKnown RBP2.57□□□□□ -2
MSS116YDR194C DNF3Q12674 1656 aa2.57□□□□□ -2
MSS116YDR194C YBR201C-AQ2V2Q3 67 aa2.57□□□□□ -2
MSS116YDR194C Q0032Q9ZZX7 96 aa2.57□□□□□ -2
MSS116YDR194C TY1B-LR3P0C2I6 1755 aaKnown RBP2.57□□□□□ -2
MSS116YDR194C TY1B-PR3P0C2J1 1755 aaKnown RBP2.57□□□□□ -2
MSS116YDR194C YBR072C-AQ3E794 53 aa2.56□□□□□ -2
MSS116YDR194C COX7P10174 60 aa2.56□□□□□ -2
MSS116YDR194C VMA9Q3E7B6 73 aa2.56□□□□□ -2
MSS116YDR194C YOL097W-AQ3E7Y9 61 aa2.56□□□□□ -2
MSS116YDR194C PDR12Q02785 1511 aa2.55□□□□□ -2
MSS116YDR194C MOT1P32333 1867 aa2.55□□□□□ -2
MSS116YDR194C TY1B-DR5P0C2I2 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-DR6P0C2I3 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-LR2P0C2I5 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-PR1P0C2I9 1755 aaKnown RBP2.54□□□□□ -2
MSS116YDR194C TY1B-JR1P47098 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-ML2Q03434 1755 aaKnown RBP2.54□□□□□ -2
MSS116YDR194C TY1B-ER1Q03612 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-ML1Q04711 1755 aaKnown RBP2.54□□□□□ -2
MSS116YDR194C TY1B-GR2Q12269 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-OLQ12273 1755 aa2.54□□□□□ -2
MSS116YDR194C TY1B-PLQ12414 1755 aaKnown RBP2.54□□□□□ -2
MSS116YDR194C IML1P47170 1584 aa2.54□□□□□ -2
MSS116YDR194C YNL198CP40166 100 aa2.54□□□□□ -2
MSS116YDR194C ATP18P81450 59 aa2.54□□□□□ -2
MSS116YDR194C PMD1P32634 1753 aa2.54□□□□□ -2
MSS116YDR194C AUA1P32450 94 aa2.53□□□□□ -2
MSS116YDR194C PAU7P39545 55 aa2.53□□□□□ -2
MSS116YDR194C TOR1P35169 2470 aa2.53□□□□□ -2
MSS116YDR194C RPL43AP0CX25 92 aaKnown RBP2.52□□□□□ -2.01
MSS116YDR194C RPL43BP0CX26 92 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms