RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W ICY1Q04329 127 aa0.72□□□□□ -2.29
SCC2YDR180W TEL1P38110 2787 aa0.71□□□□□ -2.3
SCC2YDR180W ABF2Q02486 183 aa0.71□□□□□ -2.3
SCC2YDR180W YLR194CQ05777 254 aa0.71□□□□□ -2.3
SCC2YDR180W ATX1P38636 73 aa0.71□□□□□ -2.3
SCC2YDR180W RPB11P38902 120 aa0.71□□□□□ -2.3
SCC2YDR180W YIL059CP40520 121 aa0.71□□□□□ -2.3
SCC2YDR180W RSM19P53733 91 aaPredicted RBP0.71□□□□□ -2.3
SCC2YDR180W FYV12Q08559 129 aa0.71□□□□□ -2.3
SCC2YDR180W YNL162W-AQ3E7A8 72 aa0.71□□□□□ -2.3
SCC2YDR180W GCN1P33892 2672 aaKnown RBP0.71□□□□□ -2.3
SCC2YDR180W ICS3P47034 131 aa0.71□□□□□ -2.3
SCC2YDR180W VPS68Q12016 184 aa0.71□□□□□ -2.3
SCC2YDR180W NOP10Q6Q547 58 aaPredicted RBP0.71□□□□□ -2.3
SCC2YDR180W FAB1P34756 2278 aa0.7□□□□□ -2.3
SCC2YDR180W MDM35O60200 86 aa0.7□□□□□ -2.3
SCC2YDR180W NHP2P32495 156 aaPredicted RBP0.7□□□□□ -2.3
SCC2YDR180W YHP1Q04116 353 aa0.7□□□□□ -2.3
SCC2YDR180W YLR042CQ07990 161 aa0.7□□□□□ -2.3
SCC2YDR180W YOL014WQ08110 124 aa0.7□□□□□ -2.3
SCC2YDR180W YPL261CQ08976 102 aa0.7□□□□□ -2.3
SCC2YDR180W YOR376W-AQ3E805 51 aa0.7□□□□□ -2.3
SCC2YDR180W YAL067W-AQ8TGK6 75 aa0.7□□□□□ -2.3
SCC2YDR180W YHL005CP38752 130 aa0.7□□□□□ -2.3
SCC2YDR180W EDC2P40023 145 aaPredicted RBP0.7□□□□□ -2.3
SCC2YDR180W PEX17P40155 199 aa0.7□□□□□ -2.3
SCC2YDR180W YFL051CP43552 160 aa0.7□□□□□ -2.3
SCC2YDR180W HSK3P69852 69 aa0.7□□□□□ -2.3
SCC2YDR180W IRC25Q07951 179 aa0.7□□□□□ -2.3
SCC2YDR180W YFR032C-BQ8TGU2 87 aa0.7□□□□□ -2.3
SCC2YDR180W APS1P35181 156 aa0.7□□□□□ -2.3
SCC2YDR180W YGL260WP53056 76 aa0.7□□□□□ -2.3
SCC2YDR180W RGM1Q00453 211 aa0.7□□□□□ -2.3
SCC2YDR180W GPI19Q04082 140 aa0.7□□□□□ -2.3
SCC2YDR180W HPA2Q06592 156 aa0.7□□□□□ -2.3
SCC2YDR180W YFR009W-AP0C5M9 85 aa0.7□□□□□ -2.3
SCC2YDR180W MRPL38P35996 138 aaPredicted RBP0.7□□□□□ -2.3
SCC2YDR180W ARC15P40518 154 aaRIP-Chip data0.7□□□□□ -2.3not detected
SCC2YDR180W COF1Q03048 143 aaKnown RBP0.7□□□□□ -2.3
SCC2YDR180W YOR314WQ12506 109 aa0.7□□□□□ -2.3
SCC2YDR180W YDR182W-AQ3E796 67 aa0.7□□□□□ -2.3
SCC2YDR180W YML100W-AQ8TGT0 57 aa0.7□□□□□ -2.3
SCC2YDR180W BPH1P25356 2167 aa0.69□□□□□ -2.3
SCC2YDR180W YER188C-AP0C0V2 99 aa0.69□□□□□ -2.3
SCC2YDR180W RPL30P14120 105 aaKnown RBP0.69□□□□□ -2.3
SCC2YDR180W HSP150P32478 413 aa0.69□□□□□ -2.3
SCC2YDR180W YBR219CP38317 127 aa0.69□□□□□ -2.3
SCC2YDR180W YNL217WP40152 326 aa0.69□□□□□ -2.3
SCC2YDR180W YGL258W-AQ3E740 77 aa0.69□□□□□ -2.3
SCC2YDR180W YJL197C-AP0C5P0 93 aa0.69□□□□□ -2.3
SCC2YDR180W YLR156WP0CE96 114 aa0.69□□□□□ -2.3
SCC2YDR180W YLR159WP0CE97 114 aa0.69□□□□□ -2.3
SCC2YDR180W YLR161WP0CE98 114 aa0.69□□□□□ -2.3
SCC2YDR180W YAR029WP39549 74 aa0.69□□□□□ -2.3
SCC2YDR180W YPR013CQ12145 317 aa0.69□□□□□ -2.3
SCC2YDR180W RPS11AP0CX47 156 aaKnown RBP0.69□□□□□ -2.3
SCC2YDR180W RPS11BP0CX48 156 aaKnown RBP0.69□□□□□ -2.3
SCC2YDR180W YER181CP40097 107 aa0.69□□□□□ -2.3
SCC2YDR180W REE1P40893 198 aa0.69□□□□□ -2.3
SCC2YDR180W VAM10Q08474 114 aa0.69□□□□□ -2.3
SCC2YDR180W YHR022CP38763 256 aa0.68□□□□□ -2.3
SCC2YDR180W DSE2P38844 325 aa0.68□□□□□ -2.3
SCC2YDR180W YMR230W-AQ3E7B5 62 aa0.68□□□□□ -2.3
SCC2YDR180W HTL1Q9URQ5 78 aa0.68□□□□□ -2.3
SCC2YDR180W FPR1P20081 114 aaKnown RBP0.68□□□□□ -2.3
SCC2YDR180W YDR210WQ03482 75 aa0.68□□□□□ -2.3
SCC2YDR180W ECM19Q06011 112 aa0.68□□□□□ -2.3
SCC2YDR180W CCW14O13547 238 aa0.68□□□□□ -2.3
SCC2YDR180W RPS27AP35997 82 aaKnown RBP0.68□□□□□ -2.3
SCC2YDR180W YSY6P38374 65 aa0.68□□□□□ -2.3
SCC2YDR180W RPS27BP38711 82 aa0.68□□□□□ -2.3
SCC2YDR180W MPC2P38857 129 aa0.68□□□□□ -2.3
SCC2YDR180W SMT3Q12306 101 aaKnown RBP0.68□□□□□ -2.3
SCC2YDR180W YIL156W-BQ2V2P4 73 aa0.68□□□□□ -2.3
SCC2YDR180W YOR034C-AQ3E735 80 aa0.68□□□□□ -2.3
SCC2YDR180W YCR001WP25347 104 aa0.68□□□□□ -2.3
SCC2YDR180W GON7P46984 123 aa0.68□□□□□ -2.3
SCC2YDR180W IRC19Q07843 230 aa0.68□□□□□ -2.3
SCC2YDR180W YHR032W-AP0C5N6 59 aa0.67□□□□□ -2.3
SCC2YDR180W YDR102CQ03864 110 aa0.67□□□□□ -2.3
SCC2YDR180W YMR122CQ03879 124 aa0.67□□□□□ -2.3
SCC2YDR180W YLR342W-AQ3E810 57 aa0.67□□□□□ -2.3
SCC2YDR180W POL2P21951 2222 aaKnown RBP0.67□□□□□ -2.3
SCC2YDR180W EAF6P47128 113 aa0.67□□□□□ -2.3
SCC2YDR180W TMC1Q08422 150 aaPredicted RBP0.67□□□□□ -2.3
SCC2YDR180W YMR105W-AQ8TGS8 64 aa0.67□□□□□ -2.3
SCC2YDR180W YBR056W-AI2HB52 66 aa0.67□□□□□ -2.3
SCC2YDR180W YBR200W-AQ3E755 54 aa0.66□□□□□ -2.3
SCC2YDR180W YLR307C-AQ3E825 87 aa0.66□□□□□ -2.3
SCC2YDR180W HMRA2P0CY13 119 aa0.66□□□□□ -2.3
SCC2YDR180W ATP15P21306 62 aa0.66□□□□□ -2.3
SCC2YDR180W GIS2P53849 153 aaKnown RBP RIP-Chip data0.66□□□□□ -2.3not detected
SCC2YDR180W ATP20Q12233 115 aa0.66□□□□□ -2.3
SCC2YDR180W YBR209WP38311 105 aa0.66□□□□□ -2.3
SCC2YDR180W PAU7P39545 55 aa0.66□□□□□ -2.3
SCC2YDR180W YIL086CP40503 102 aa0.66□□□□□ -2.3
SCC2YDR180W HUR1P45820 110 aa0.66□□□□□ -2.3
SCC2YDR180W DAD1Q12248 94 aa0.66□□□□□ -2.3
SCC2YDR180W RPL36BO14455 100 aaKnown RBP0.66□□□□□ -2.3
SCC2YDR180W RPL36AP05745 100 aaPredicted RBP0.66□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms