RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W QCR8P08525 94 aa3.98□□□□□ -1.77
VMS1YDR049W ROX3P25046 220 aa3.98□□□□□ -1.77
VMS1YDR049W YHR022CP38763 256 aa3.98□□□□□ -1.77
VMS1YDR049W RPL26BP53221 127 aaKnown RBP3.98□□□□□ -1.77
VMS1YDR049W RPS22AP0C0W1 130 aaKnown RBP3.98□□□□□ -1.77
VMS1YDR049W YOL118CQ08259 102 aa3.98□□□□□ -1.77
VMS1YDR049W YPR145C-AQ2V2P0 78 aa3.98□□□□□ -1.77
VMS1YDR049W FPR1P20081 114 aaKnown RBP3.97□□□□□ -1.77
VMS1YDR049W YNR034W-AQ3E841 98 aa3.97□□□□□ -1.77
VMS1YDR049W YNL198CP40166 100 aa3.96□□□□□ -1.78
VMS1YDR049W NHP2P32495 156 aaPredicted RBP3.95□□□□□ -1.78
VMS1YDR049W YER084WP40057 128 aa3.95□□□□□ -1.78
VMS1YDR049W CYT2Q00873 224 aa3.94□□□□□ -1.78
VMS1YDR049W VMA9Q3E7B6 73 aa3.94□□□□□ -1.78
VMS1YDR049W RPS22BQ3E7Y3 130 aaKnown RBP3.94□□□□□ -1.78
VMS1YDR049W YFL041W-AQ3E817 63 aa3.94□□□□□ -1.78
VMS1YDR049W LAA1P39526 2014 aa3.94□□□□□ -1.78
VMS1YDR049W HMRA2P0CY13 119 aa3.94□□□□□ -1.78
VMS1YDR049W MRP17P28778 131 aa3.94□□□□□ -1.78
VMS1YDR049W YBR027CP38220 110 aa3.94□□□□□ -1.78
VMS1YDR049W YPL038W-AQ3E7B4 63 aa3.94□□□□□ -1.78
VMS1YDR049W FLO9P39712 1322 aa3.93□□□□□ -1.78
VMS1YDR049W LST8P41318 303 aa3.93□□□□□ -1.78
VMS1YDR049W YHR214C-DP0CX93 97 aa3.92□□□□□ -1.78
VMS1YDR049W POR2P40478 281 aa3.92□□□□□ -1.78
VMS1YDR049W YDR114CQ04597 100 aa3.92□□□□□ -1.78
VMS1YDR049W YKL018C-AQ3E7A7 99 aa3.92□□□□□ -1.78
VMS1YDR049W YOR343CQ12484 108 aa3.91□□□□□ -1.78
VMS1YDR049W YMR230W-AQ3E7B5 62 aa3.91□□□□□ -1.78
VMS1YDR049W FAS1P07149 2051 aaKnown RBP3.9□□□□□ -1.78
VMS1YDR049W YOR105WQ08504 108 aa3.9□□□□□ -1.79
VMS1YDR049W YCR095W-AQ3E787 52 aa3.9□□□□□ -1.79
VMS1YDR049W YJL144WP47009 104 aa3.89□□□□□ -1.79
VMS1YDR049W YJR146WP47174 117 aa3.89□□□□□ -1.79
VMS1YDR049W YMR321CQ04898 105 aa3.89□□□□□ -1.79
VMS1YDR049W LSM6Q06406 86 aaKnown RBP3.88□□□□□ -1.79
VMS1YDR049W YLR285C-AQ3E771 56 aa3.88□□□□□ -1.79
VMS1YDR049W SPC1P46965 94 aa3.88□□□□□ -1.79
VMS1YDR049W ECM29P38737 1868 aa3.87□□□□□ -1.79
VMS1YDR049W YHL037CP38733 133 aa3.87□□□□□ -1.79
VMS1YDR049W SLH1P53327 1967 aaKnown RBP3.87□□□□□ -1.79
VMS1YDR049W MRPL38P35996 138 aaPredicted RBP3.86□□□□□ -1.79
VMS1YDR049W YGL260WP53056 76 aa3.86□□□□□ -1.79
VMS1YDR049W COX12Q01519 83 aa3.86□□□□□ -1.79
VMS1YDR049W YHR007C-AQ07074 71 aa3.85□□□□□ -1.79
VMS1YDR049W YIL102C-AQ2V2P5 75 aa3.85□□□□□ -1.79
VMS1YDR049W SNA2P56508 79 aa3.84□□□□□ -1.79
VMS1YDR049W PFY1P07274 126 aa3.84□□□□□ -1.8
VMS1YDR049W YGL014C-AP0C5N1 53 aa3.84□□□□□ -1.8
VMS1YDR049W TIM12P32830 109 aa3.84□□□□□ -1.8
VMS1YDR049W YOR314WQ12506 109 aa3.84□□□□□ -1.8
VMS1YDR049W RDS3Q06835 107 aaPredicted RBP3.83□□□□□ -1.8
VMS1YDR049W YCL048W-AQ2V2Q2 79 aa3.83□□□□□ -1.8
VMS1YDR049W IRC21Q04772 201 aa3.82□□□□□ -1.8
VMS1YDR049W MRPL31P14063 131 aaPredicted RBP3.81□□□□□ -1.8
VMS1YDR049W MIX17Q03667 156 aa3.81□□□□□ -1.8
VMS1YDR049W STT4P37297 1900 aa3.8□□□□□ -1.8
VMS1YDR049W YER188C-AP0C0V2 99 aa3.8□□□□□ -1.8
VMS1YDR049W YAL065CO13511 128 aa3.79□□□□□ -1.8
VMS1YDR049W YIL163CP40448 117 aa3.79□□□□□ -1.8
VMS1YDR049W YKL065W-AQ2V2P2 73 aa3.79□□□□□ -1.8
VMS1YDR049W YBL071CP38185 102 aa3.79□□□□□ -1.8
VMS1YDR049W AIM4P38305 123 aaPredicted RBP3.79□□□□□ -1.8
VMS1YDR049W MRX7P53869 86 aa3.79□□□□□ -1.8
VMS1YDR049W RPL33AP05744 107 aaKnown RBP3.78□□□□□ -1.8
VMS1YDR049W PAU6P0CE90 120 aa3.78□□□□□ -1.8
VMS1YDR049W PAU18P0CE91 120 aa3.78□□□□□ -1.8
VMS1YDR049W MPC2P38857 129 aa3.78□□□□□ -1.8
VMS1YDR049W SED1Q01589 338 aa3.78□□□□□ -1.8
VMS1YDR049W YPR096CO13587 100 aa3.77□□□□□ -1.81
VMS1YDR049W VPS55P47111 140 aa3.77□□□□□ -1.81
VMS1YDR049W YMR122CQ03879 124 aa3.77□□□□□ -1.81
VMS1YDR049W YGR121W-AQ3E816 71 aa3.77□□□□□ -1.81
VMS1YDR049W TAR1Q8TGM6 124 aa3.76□□□□□ -1.81
VMS1YDR049W COX19Q3E731 98 aa3.75□□□□□ -1.81
VMS1YDR049W TOM1Q03280 3268 aa3.75□□□□□ -1.81
VMS1YDR049W COX9P07255 59 aa3.75□□□□□ -1.81
VMS1YDR049W DSE2P38844 325 aa3.75□□□□□ -1.81
VMS1YDR049W PAU8P0CE92 120 aa3.73□□□□□ -1.81
VMS1YDR049W PAU11P0CE93 120 aa3.73□□□□□ -1.81
VMS1YDR049W QCR9P22289 66 aa3.73□□□□□ -1.81
VMS1YDR049W AGA2P32781 87 aa3.73□□□□□ -1.81
VMS1YDR049W PAU13P38725 120 aa3.73□□□□□ -1.81
VMS1YDR049W PAU4P53427 120 aa3.73□□□□□ -1.81
VMS1YDR049W PAU10Q03050 120 aa3.73□□□□□ -1.81
VMS1YDR049W PAU9Q3E770 120 aa3.73□□□□□ -1.81
VMS1YDR049W CCW14O13547 238 aa3.73□□□□□ -1.81
VMS1YDR049W YSF3P0C074 85 aaPredicted RBP3.73□□□□□ -1.81
VMS1YDR049W YHR173CP38864 112 aa3.73□□□□□ -1.81
VMS1YDR049W YLR162WQ06235 118 aa3.73□□□□□ -1.81
VMS1YDR049W YLR146W-AQ2V2P1 62 aa3.73□□□□□ -1.81
VMS1YDR049W FPR2P32472 135 aa3.72□□□□□ -1.81
VMS1YDR049W BSC4P53841 131 aa3.72□□□□□ -1.81
VMS1YDR049W VAM10Q08474 114 aa3.71□□□□□ -1.82
VMS1YDR049W YDR010CQ12426 110 aa3.7□□□□□ -1.82
VMS1YDR049W YSY6P38374 65 aa3.69□□□□□ -1.82
VMS1YDR049W YEL008WP40001 126 aa3.69□□□□□ -1.82
VMS1YDR049W LCL2Q08045 131 aa3.69□□□□□ -1.82
VMS1YDR049W CCW12Q12127 133 aa3.69□□□□□ -1.82
VMS1YDR049W CDC39P25655 2108 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms